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Items: 1 to 20 of 38

1.
Comparative exploration of mammalian deafness gene homologues in the Drosophila auditory organ shows genetic correlation between insect and vertebrate hearing
Daniel C. Sutton, Jonathan C. Andrews, Dylan M. Dolezal, Ye Jin Park, Hongjie Li, Daniel F. Eberl, Shinya Yamamoto, Andrew K. Groves
PLoS One. 2024; 19(2): e0297846. Published online 2024 Feb 27. doi: 10.1371/journal.pone.0297846
PMCID:
PMC10898740
AbstractArticlePDF–2.8M
2.
Mettl3-dependent m6A modification attenuates the brain stress response in Drosophila
Alexandra E. Perlegos, Emily J. Shields, Hui Shen, Kathy Fange Liu, Nancy M. Bonini
Nat Commun. 2022; 13: 5387. Published online 2022 Sep 14. doi: 10.1038/s41467-022-33085-3
PMCID:
PMC9474545
AbstractArticlePDF–2.7M
3.
PTPN9-mediated dephosphorylation of VTI1B promotes ATG16L1 precursor fusion and autophagosome formation
He-Yen Chou, Yi-Tang Lee, Yuchieh Jay Lin, Jung-Kun Wen, Wen-Hsin Peng, Pei-Lien Hsieh, Shu-Yu Lin, Chin-Chun Hung, Guang-Chao Chen
Autophagy. 2021; 17(10): 2750–2765. Published online 2020 Oct 28. doi: 10.1080/15548627.2020.1838117
PMCID:
PMC8526009
AbstractArticlePDF–24M
4.
NatB regulates Rb mutant cell death and tumor growth by modulating EGFR/MAPK signaling through the N-end rule pathways
Zhentao Sheng, Wei Du
PLoS Genet. 2020 Jun; 16(6): e1008863. Published online 2020 Jun 19. doi: 10.1371/journal.pgen.1008863
PMCID:
PMC7329143
AbstractArticlePDF–6.6M
5.
Single-Step Affinity Purification of ERK Signaling Complexes Using the Streptavidin-Binding Peptide (SBP) Tag
Liu Yang, Alexey Veraksa
Methods Mol Biol. Author manuscript; available in PMC 2019 Apr 29.
Published in final edited form as: Methods Mol Biol. 2017; 1487: 113–126. doi: 10.1007/978-1-4939-6424-6_8
PMCID:
PMC6488233
AbstractArticlePDF–609K
6.
Pooled genome-wide CRISPR screening for basal and context-specific fitness gene essentiality in Drosophila cells
Raghuvir Viswanatha, Zhongchi Li, Yanhui Hu, Norbert Perrimon
eLife. 2018; 7: e36333. Published online 2018 Jul 27. doi: 10.7554/eLife.36333
PMCID:
PMC6063728
AbstractArticlePDF–3.1M
7.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
8.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
9.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
10.
Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing
Alborz Mazloomian, Irmtraud M Meyer
RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703
PMCID:
PMC4829317
AbstractArticlePDF–609K
11.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
12.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
13.
The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster
Gunjan H. Arya, Michael M. Magwire, Wen Huang, Yazmin L. Serrano-Negron, Trudy F.C. Mackay, Robert R.H. Anholt
Chem Senses. 2015 May; 40(4): 233–243. Published online 2015 Feb 15. doi: 10.1093/chemse/bjv001
PMCID:
PMC4398050
AbstractArticlePDF–8.9M
14.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
15.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
16.
Combining Genetic Perturbations and Proteomics to Examine Kinase-Phosphatase Networks in Drosophila Embryos
Richelle Sopko, Marianna Foos, Arunachalam Vinayagam, Bo Zhai, Richard Binari, Yanhui Hu, Sakara Randklev, Lizabeth A. Perkins, Steven P. Gygi, Norbert Perrimon
Dev Cell. Author manuscript; available in PMC 2015 Oct 13.
Published in final edited form as: Dev Cell. 2014 Oct 13; 31(1): 114–127. Published online 2014 Oct 2. doi: 10.1016/j.devcel.2014.07.027
PMCID:
PMC4208667
AbstractArticlePDF–2.4M
17.
A Functional Screen Reveals an Extensive Layer of Transcriptional and Splicing Control Underlying RAS/MAPK Signaling in Drosophila
Dariel Ashton-Beaucage, Christian M. Udell, Patrick Gendron, Malha Sahmi, Martin Lefrançois, Caroline Baril, Anne-Sophie Guenier, Jean Duchaine, Daniel Lamarre, Sébastien Lemieux, Marc Therrien
PLoS Biol. 2014 Mar; 12(3): e1001809. Published online 2014 Mar 18. doi: 10.1371/journal.pbio.1001809
PMCID:
PMC3958334
AbstractArticlePDF–4.0M
18.
Inferring Gene Function and Network Organization in Drosophila Signaling by Combined Analysis of Pleiotropy and Epistasis
Gregory W. Carter
G3 (Bethesda) 2013 May; 3(5): 807–814. Published online 2013 May 1. doi: 10.1534/g3.113.005710
PMCID:
PMC3656728
AbstractArticlePDF–1.0M
19.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
20.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M

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