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Select item 108667141.

SHR and SCR coordinate root patterning and growth early in the cell cycle

Cara M. Winter, Pablo Szekely, Vladimir Popov, Heather Belcher, Raina Carter, Matthew Jones, Scott E. Fraser, Thai V. Truong, Philip N. Benfey

Nature. 2024; 626(7999): 611–616. Published online 2024 Jan 31. doi: 10.1038/s41586-023-06971-z

PMCID:: PMC10866714

Abstract Article PDF–11M

Select item 106429692.

The Arabidopsis SHORTROOT network coordinates shoot apical meristem development with auxin-dependent lateral organ initiation

Elmehdi Bahafid, Imke Bradtmöller, Ann M Thies, Thi TON Nguyen, Crisanto Gutierrez, Bénédicte Desvoyes, Yvonne Stahl, Ikram Blilou, Rüdiger GW Simon

eLife. 2023; 12: e83334. Published online 2023 Oct 20. doi: 10.7554/eLife.83334

PMCID:: PMC10642969

Abstract Article PDF–6.7M

Select item 72039413.

SHORTROOT-Mediated Intercellular Signals Coordinate Phloem Development in Arabidopsis Roots

Hyoujin Kim, Jing Zhou, Deepak Kumar, Geupil Jang, Kook Hui Ryu, Jose Sebastian, Shunsuke Miyashima, Ykä Helariutta, Ji-Young Lee

Plant Cell. 2020 May; 32(5): 1519–1535. Published online 2020 Feb 28. doi: 10.1105/tpc.19.00455

PMCID:: PMC7203941

Abstract Article PDF–4.4M

Select item 57618014.

KinG Is a Plant-Specific Kinesin That Regulates Both Intra- and Intercellular Movement of SHORT-ROOT

Ziv Spiegelman, Chin-Mei Lee, Kimberly L. Gallagher

Plant Physiol. 2018 Jan; 176(1): 392–405. Published online 2017 Nov 9. doi: 10.1104/pp.17.01518

PMCID:: PMC5761801

Abstract Article PDF–2.9M

Select item 56399365.

Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD

Yoshinori Hirano, Masahiro Nakagawa, Tomoe Suyama, Kohji Murase, Maya Shirakawa, Seiji Takayama, Tai-ping Sun, Toshio Hakoshima

Nat Plants. Author manuscript; available in PMC 2017 Oct 13.

Published in final edited form as: Nat Plants. 2017 Feb 17; 3: 17010. Published online 2017 Feb 17. doi: 10.1038/nplants.2017.10

PMCID:: PMC5639936

Abstract Article PDF–887K

Select item 53493236.

Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors

Erin E. Sparks, Colleen Drapek, Allison Gaudinier, Song Li, Mitra Ansariola, Ning Shen, Jessica H. Hennacy, Jingyuan Zhang, Gina Turco, Jalean J. Petricka, Jessica Foret, Alexander J. Hartemink, Raluca Gordân, Molly Megraw, Siobhan M. Brady, Philip N. Benfey

Dev Cell. Author manuscript; available in PMC 2017 Dec 5.

Published in final edited form as: Dev Cell. 2016 Dec 5; 39(5): 585–596. Published online 2016 Oct 27. doi: 10.1016/j.devcel.2016.09.031

PMCID:: PMC5349323

Abstract Article PDF–2.4M

Select item 50066987.

SHORT-ROOT Deficiency Alleviates the Cell Death Phenotype of the Arabidopsis catalase2 Mutant under Photorespiration-Promoting Conditions

Cezary Waszczak, Pavel I. Kerchev, Per Mühlenbock, Frank A. Hoeberichts, Katrien Van Der Kelen, Amna Mhamdi, Patrick Willems, Jordi Denecker, Robert P. Kumpf, Graham Noctor, Joris Messens, Frank Van Breusegem

Plant Cell. 2016 Aug; 28(8): 1844–1859. Published online 2016 Jul 18. doi: 10.1105/tpc.16.00038

Correction in:: Plant Cell. 2020 Jan; 32(1): 285.

PMCID:: PMC5006698

Abstract Article PDF–1.8M

Select item 47751218.

SEUSS Integrates Gibberellin Signaling with Transcriptional Inputs from the SHR-SCR-SCL3 Module to Regulate Middle Cortex Formation in the Arabidopsis Root

Xue Gong, Miguel A. Flores-Vergara, Jing Han Hong, Huangwei Chu, Jun Lim, Robert G. Franks, Zhongchi Liu, Jian Xu

Plant Physiol. 2016 Mar; 170(3): 1675–1683. Published online 2016 Jan 27. doi: 10.1104/pp.15.01501

PMCID:: PMC4775121

Abstract Article PDF–1.8M

Select item 43465839.

PHABULOSA Controls the Quiescent Center-Independent Root Meristem Activities in Arabidopsis thaliana

Jose Sebastian, Kook Hui Ryu, Jing Zhou, Danuše Tarkowská, Petr Tarkowski, Young-Hee Cho, Sang-Dong Yoo, Eun-Sol Kim, Ji-Young Lee

PLoS Genet. 2015 Mar; 11(3): e1004973. Published online 2015 Mar 2. doi: 10.1371/journal.pgen.1004973

PMCID:: PMC4346583

Abstract Article PDF–9.2M

Select item 434329210.

Arabidopsis SHR and SCR transcription factors and AUX1 auxin influx carrier control the switch between adventitious rooting and xylogenesis in planta and in in vitro cultured thin cell layers

F. Della Rovere, L. Fattorini, S. D’Angeli, A. Veloccia, S. Del Duca, G. Cai, G. Falasca, M. M. Altamura

Ann Bot. 2015 Mar; 115(4): 617–628. Published online 2015 Jan 22. doi: 10.1093/aob/mcu258

PMCID:: PMC4343292

Abstract Article PDF–2.3M

Select item 433372211.

An Arabidopsis Gene Regulatory Network for Secondary Cell Wall Synthesis

M Taylor-Teeples, L Lin, M de Lucas, G Turco, TW Toal, A Gaudinier, NF Young, GM Trabucco, MT Veling, R Lamothe, PP Handakumbura, G Xiong, C Wang, J Corwin, A Tsoukalas, L Zhang, D Ware, M Pauly, DJ Kliebenstein, K Dehesh, I Tagkopoulos, G Breton, JL Pruneda-Paz, SE Ahnert, SA Kay, SP Hazen, SM Brady

Nature. Author manuscript; available in PMC 2015 Jul 29.

Published in final edited form as: Nature. 2015 Jan 29; 517(7536): 571–575. Published online 2014 Dec 24. doi: 10.1038/nature14099

PMCID:: PMC4333722

Abstract Article PDF–3.2M

Select item 423458412.

A plausible mechanism, based upon SHORT-ROOT movement, for regulating the number of cortex cell layers in roots

Shuang Wu, Chin-Mei Lee, Tomomi Hayashi, Simara Price, Fanchon Divol, Sophia Henry, Germain Pauluzzi, Christophe Perin, Kimberly L. Gallagher

Proc Natl Acad Sci U S A. 2014 Nov 11; 111(45): 16184–16189. Published online 2014 Oct 28. doi: 10.1073/pnas.1407371111

PMCID:: PMC4234584

Abstract Article PDF–1.1M

Select item 357889513.

SCARECROW reinforces SHORT-ROOT signaling and inhibits periclinal cell divisions in the ground tissue by maintaining SHR at high levels in the endodermis

Koji Koizumi, Tomomi Hayashi, Kimberly L. Gallagher

Plant Signal Behav. 2012 Dec 1; 7(12): 1573–1577. doi: 10.4161/psb.22437

PMCID:: PMC3578895

Abstract Article PDF–2.1M

Select item 350039914.

A Bistable Circuit Involving SCARECROW-RETINOBLASTOMA Integrates Cues to Inform Asymmetric Stem Cell Division

Alfredo Cruz-Ramírez, Sara Díaz-Triviño, Ikram Blilou, Verônica A. Grieneisen, Rosangela Sozzani, Christos Zamioudis, Pál Miskolczi, Jeroen Nieuwland, René Benjamins, Pankaj Dhonukshe, Juan Caballero-Pérez, Beatrix Horvath, Yuchen Long, Ari Pekka Mähönen, Hongtao Zhang, Jian Xu, James A.H. Murray, Philip N. Benfey, Laszlo Bako, Athanasius F.M. Marée, Ben Scheres

Cell. Author manuscript; available in PMC 2013 Aug 31.

Published in final edited form as: Cell. 2012 Aug 31; 150(5): 1002–1015. Published online 2012 Aug 23. doi: 10.1016/j.cell.2012.07.017

PMCID:: PMC3500399

Abstract Article PDF–5.3M

Select item 344390915.

SHORT-ROOT regulates vascular patterning, but not apical meristematic activity in the Arabidopsis root through cytokinin homeostasis

Yueling Hao, Hongchang Cui

Plant Signal Behav. 2012 Mar 1; 7(3): 314–317. doi: 10.4161/psb.19118

PMCID:: PMC3443909

Abstract Article PDF–730K

Select item 342020416.

The SHORT-ROOT protein acts as a mobile, dose-dependent signal in patterning the ground tissue

Koji Koizumi, Tomomi Hayashi, Shuang Wu, Kimberly L. Gallagher

Proc Natl Acad Sci U S A. 2012 Aug 7; 109(32): 13010–13015. Published online 2012 Jul 23. doi: 10.1073/pnas.1205579109

PMCID:: PMC3420204

Abstract Article PDF–713K

Select item 325217117.

Genome-Wide Direct Target Analysis Reveals a Role for SHORT-ROOT in Root Vascular Patterning through Cytokinin Homeostasis

Hongchang Cui, Yueling Hao, Mikhail Kovtun, Viktor Stolc, Xing-Wang Deng, Hitoshi Sakakibara, Mikiko Kojima

Plant Physiol. 2011 Nov; 157(3): 1221–1231. Published online 2011 Sep 27. doi: 10.1104/pp.111.183178

PMCID:: PMC3252171

Abstract Article PDF–1.5M

Select item 323756218.

Reduced Expression of the SHORT-ROOT Gene Increases the Rates of Growth and Development in Hybrid Poplar and Arabidopsis

Jiehua Wang, Sara Andersson-Gunnerås, Ioana Gaboreanu, Magnus Hertzberg, Matthew R. Tucker, Bo Zheng, Joanna Leśniewska, Ewa J. Mellerowicz, Thomas Laux, Göran Sandberg, Brian Jones

PLoS One. 2011; 6(12): e28878. Published online 2011 Dec 14. doi: 10.1371/journal.pone.0028878

PMCID:: PMC3237562

Abstract Article PDF–5.1M

Select item 307578419.

SHORT-ROOT Regulates Primary, Lateral, and Adventitious Root Development in Arabidopsis

Mikaël Lucas, Ranjan Swarup, Ivan A. Paponov, Kamal Swarup, Ilda Casimiro, David Lake, Benjamin Peret, Susan Zappala, Stefan Mairhofer, Morag Whitworth, Jiehua Wang, Karin Ljung, Alan Marchant, Goran Sandberg, Michael J. Holdsworth, Klaus Palme, Tony Pridmore, Sacha Mooney, Malcolm J. Bennett

Plant Physiol. 2011 Jan; 155(1): 384–398. Published online 2010 Oct 27. doi: 10.1104/pp.110.165126

PMCID:: PMC3075784

Abstract Article PDF–2.6M

Select item 297159820.

SHORT-ROOT and SCARECROW Regulate Leaf Growth in Arabidopsis by Stimulating S-Phase Progression of the Cell Cycle

Stijn Dhondt, Frederik Coppens, Freya De Winter, Kamal Swarup, Roeland M.H. Merks, Dirk Inzé, Malcolm J. Bennett, Gerrit T.S. Beemster

Plant Physiol. 2010 Nov; 154(3): 1183–1195. Published online 2010 Aug 25. doi: 10.1104/pp.110.158857

PMCID:: PMC2971598

Abstract Article PDF–819K

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