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Select item 106591621.

MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images

Yuyang Huang, Gufeng Yu, Yang Yang

PLoS Comput Biol. 2023 Nov; 19(11): e1011623. Published online 2023 Nov 8. doi: 10.1371/journal.pcbi.1011623

PMCID:: PMC10659162

Abstract Article PDF–2.4M

Select item 102207402.

Temporal Exposure to Bt Insecticide Causes Oxidative Stress in Larval Midgut Tissue

Biko K. Muita, Simon W. Baxter

Toxins (Basel) 2023 May; 15(5): 323. Published online 2023 May 7. doi: 10.3390/toxins15050323

PMCID:: PMC10220740

Abstract Article PDF–3.2M

Select item 100722753.

Drosophila SPG12 ortholog, reticulon-like 1, governs presynaptic ER organization and Ca²⁺ dynamics

Juan José Pérez-Moreno, Rebecca C. Smith, Megan K. Oliva, Filomena Gallo, Shainy Ojha, Karin H. Müller, Cahir J. O’Kane

J Cell Biol. 2023 Jun 5; 222(6): e202112101. Published online 2023 Mar 23. doi: 10.1083/jcb.202112101

PMCID:: PMC10072275

Abstract Article PDF–12M

Select item 95771024.

Convergence of secretory, endosomal, and autophagic routes in trans-Golgi–associated lysosomes

Lingjian Zhou, Xutong Xue, Ke Yang, Zhi Feng, Min Liu, José C. Pastor-Pareja

J Cell Biol. 2023 Jan 2; 222(1): e202203045. Published online 2022 Oct 14. doi: 10.1083/jcb.202203045

PMCID:: PMC9577102

Abstract Article PDF–15M

Select item 86644865.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 84085956.

Torsin and NEP1R1‐CTDNEP1 phosphatase affect interphase nuclear pore complex insertion by lipid‐dependent and lipid‐independent mechanisms

Julie Jacquemyn, Joyce Foroozandeh, Katlijn Vints, Jef Swerts, Patrik Verstreken, Natalia V Gounko, Sandra F Gallego, Rose Goodchild

EMBO J. 2021 Sep 1; 40(17): e106914. Published online 2021 Jul 27. doi: 10.15252/embj.2020106914

PMCID:: PMC8408595

Abstract Article PDF–11M

Select item 83190817.

Vmp1, Vps13D and Marf/Mfn2 function in a conserved pathway to regulate mitochondria and ER contact in development and disease

James L. Shen, Tina M. Fortier, Yan G. Zhao, Ruoxi Wang, Margit Burmeister, Eric H. Baehrecke

Curr Biol. Author manuscript; available in PMC 2022 Jul 26.

Published in final edited form as: Curr Biol. 2021 Jul 26; 31(14): 3028–3039.e7. Published online 2021 May 20. doi: 10.1016/j.cub.2021.04.062

PMCID:: PMC8319081

Abstract Article PDF–2.2M

Select item 82596418.

The Basolateral Polarity Module Promotes Slit Diaphragm Formation in Drosophila Nephrocytes, a Model of Vertebrate Podocytes

Michael Mysh, John S. Poulton

J Am Soc Nephrol. 2021 Jun; 32(6): 1409–1424. Published online 2021 Jun 1. doi: 10.1681/ASN.2020071050

PMCID:: PMC8259641

Abstract Article

Select item 79002249.

Rapid subcellular calcium responses and dynamics by calcium sensor G-CatchER⁺

Florence N. Reddish, Cassandra L. Miller, Xiaonan Deng, Bin Dong, Atit A. Patel, Mohammad A. Ghane, Barbara Mosca, Cheyenne McBean, Shengnan Wu, Kyril M. Solntsev, You Zhuo, Giovanni Gadda, Ning Fang, Daniel N. Cox, Angela M. Mabb, Susan Treves, Francesco Zorzato, Jenny J. Yang

iScience. 2021 Mar 19; 24(3): 102129. Published online 2021 Feb 3. doi: 10.1016/j.isci.2021.102129

PMCID:: PMC7900224

Abstract Article PDF–8.9M

Select item 754627810.

An Efficient Screen for Cell-Intrinsic Factors Identifies the Chaperonin CCT and Multiple Conserved Mechanisms as Mediating Dendrite Morphogenesis

Ying-Hsuan Wang, Zhao-Ying Ding, Ying-Ju Cheng, Cheng-Ting Chien, Min-Lang Huang

Front Cell Neurosci. 2020; 14: 577315. Published online 2020 Sep 25. doi: 10.3389/fncel.2020.577315

PMCID:: PMC7546278

Abstract Article PDF–7.7M

Select item 744614311.

Drosophila Snazarus regulates a lipid droplet population at plasma membrane-droplet contacts in adipocytes

Rupali Ugrankar, Jade Bowerman, Hanaa Hariri, Mintu Chandra, Kevin Chen, Marie-France Bossanyi, Sanchari Datta, Sean Rogers, Kaitlyn M. Eckert, Gonçalo Vale, Alexia Victoria, Joseph Fresquez, Jeffrey G. McDonald, Steve Jean, Brett M. Collins, W. Mike Henne

Dev Cell. Author manuscript; available in PMC 2020 Aug 25.

Published in final edited form as: Dev Cell. 2019 Sep 9; 50(5): 557–572.e5. Published online 2019 Aug 15. doi: 10.1016/j.devcel.2019.07.021

PMCID:: PMC7446143

Abstract Article PDF–1.9M

Select item 743884912.

Endoplasmic Reticulum Lumenal Indicators in Drosophila Reveal Effects of HSP-Related Mutations on Endoplasmic Reticulum Calcium Dynamics

Megan K. Oliva, Juan José Pérez-Moreno, Jillian O’Shaughnessy, Trevor J. Wardill, Cahir J. O’Kane

Front Neurosci. 2020; 14: 816. Published online 2020 Aug 10. doi: 10.3389/fnins.2020.00816

PMCID:: PMC7438849

Abstract Article PDF–2.2M

Select item 728959513.

FoxO suppresses endoplasmic reticulum stress to inhibit growth of Tsc1-deficient tissues under nutrient restriction

Avantika Gupta, Hugo Stocker

eLife. 2020; 9: e53159. Published online 2020 Jun 11. doi: 10.7554/eLife.53159

PMCID:: PMC7289595

Abstract Article PDF–3.5M

Select item 696157814.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 691785915.

Mutations in ANKLE2, a ZIKA virus target, disrupt an asymmetric cell division pathway in Drosophila neuroblasts to cause microcephaly.

Nichole Link, Hyunglok Chung, Angad Jolly, Marjorie Withers, Burak Tepe, Benjamin R. Arenkiel, Priya S. Shah, Nevan J. Krogan, Hatip Aydin, Bilgen B. Geckinli, Tulay Tos, Sedat Isikay, Beyhan Tuysuz, Ganesh H. Mochida, Ajay X. Thomas, Robin D. Clark, Ghayda M. Mirzaa, James R. Lupski, Hugo J. Bellen

Dev Cell. Author manuscript; available in PMC 2020 Dec 16.

Published in final edited form as: Dev Cell. 2019 Dec 16; 51(6): 713–729.e6. Published online 2019 Nov 14. doi: 10.1016/j.devcel.2019.10.009

PMCID:: PMC6917859

Abstract Article PDF–2.8M

Select item 647201616.

In vivo assembly and trafficking of olfactory Ionotropic Receptors

Liliane Abuin, Lucia L. Prieto-Godino, Haiyun Pan, Craig Gutierrez, Lan Huang, Rongsheng Jin, Richard Benton

BMC Biol. 2019; 17: 34. Published online 2019 Apr 17. doi: 10.1186/s12915-019-0651-7

PMCID:: PMC6472016

Abstract Article PDF–5.0M

Select item 638599017.

GAL4 Drivers Specific for Type Ib and Type Is Motor Neurons in Drosophila

Juan J. Pérez-Moreno, Cahir J. O’Kane

G3 (Bethesda) 2019 Feb; 9(2): 453–462. Published online 2018 Dec 10. doi: 10.1534/g3.118.200809

PMCID:: PMC6385990

Abstract Article PDF–2.3M

Select item 607860418.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 605134719.

A genome-wide RNAi screen identifies MASK as a positive regulator of cytokine receptor stability

Katherine H. Fisher, Maria Fragiadaki, Dhamayanthi Pugazhendhi, Nina Bausek, Maria A. Arredondo, Sally J. Thomas, Stephen Brown, Martin P. Zeidler

J Cell Sci. 2018 Jul 1; 131(13): jcs209551. Published online 2018 Jul 6. doi: 10.1242/jcs.209551

PMCID:: PMC6051347

Abstract Article

Select item 581265220.

Comparative transcriptomics reveals CrebA as a novel regulator of infection tolerance in D. melanogaster

Katia Troha, Joo Hyun Im, Jonathan Revah, Brian P. Lazzaro, Nicolas Buchon

PLoS Pathog. 2018 Feb; 14(2): e1006847. Published online 2018 Feb 2. doi: 10.1371/journal.ppat.1006847

PMCID:: PMC5812652

Abstract Article PDF–7.4M

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