PMC Links for GEO Profiles (Select 13732085) - PMC

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Items: 19

Select item 89767591.

A Vegfc-Emilin2a-Cxcl8a Signaling Axis Required for Zebrafish Cardiac Regeneration

Hadil El-Sammak, Bingyuan Yang, Stefan Guenther, Wenbiao Chen, Rubén Marín-Juez, Didier Y.R. Stainier

Circ Res. Author manuscript; available in PMC 2023 Apr 1.

Published in final edited form as: Circ Res. 2022 Apr; 130(7): 1014–1029. Published online 2022 Mar 10. doi: 10.1161/CIRCRESAHA.121.319929

PMCID:: PMC8976759

Abstract Article PDF–3.6M

Select item 72372082.

Zebrafish macrophage developmental arrest underlies depletion of microglia and reveals Csf1r-independent metaphocytes

Laura E Kuil, Nynke Oosterhof, Giuliano Ferrero, Tereza Mikulášová, Martina Hason, Jordy Dekker, Mireia Rovira, Herma C van der Linde, Paulina MH van Strien, Emma de Pater, Gerben Schaaf, Erik MJ Bindels, Valerie Wittamer, Tjakko J van Ham

eLife. 2020; 9: e53403. Published online 2020 May 5. doi: 10.7554/eLife.53403

PMCID:: PMC7237208

Abstract Article PDF–13M

Select item 70399293.

Deconvoluting Wavelengths Leading to Fluorescent Light Induced Inflammation and Cellular Stress in Zebrafish (Danio rerio)

Mikki Boswell, William Boswell, Yuan Lu, Markita Savage, Ronald B. Walter

Sci Rep. 2020; 10: 3321. Published online 2020 Feb 24. doi: 10.1038/s41598-020-59502-5

PMCID:: PMC7039929

Abstract Article PDF–2.5M

Select item 64992184.

RNAseq Profiling of Leukocyte Populations in Zebrafish Larvae Reveals a cxcl11 Chemokine Gene as a Marker of Macrophage Polarization During Mycobacterial Infection

Julien Rougeot, Vincenzo Torraca, Ania Zakrzewska, Zakia Kanwal, Hans J. Jansen, Frida Sommer, Herman P. Spaink, Annemarie H. Meijer

Front Immunol. 2019; 10: 832. Published online 2019 Apr 17. doi: 10.3389/fimmu.2019.00832

Correction in:: Front Immunol. 2019; 10: 2720.

PMCID:: PMC6499218

Abstract Article PDF–3.9M

Select item 64540715.

Soybean Meal-Induced Intestinal Inflammation in Zebrafish Is T Cell-Dependent and Has a Th17 Cytokine Profile

Maximo Coronado, Camila J. Solis, Pedro P. Hernandez, Carmen G. Feijóo

Front Immunol. 2019; 10: 610. Published online 2019 Apr 2. doi: 10.3389/fimmu.2019.00610

PMCID:: PMC6454071

Abstract Article PDF–3.2M

Select item 59030306.

RIP2 Is a Critical Regulator for NLRs Signaling and MHC Antigen Presentation but Not for MAPK and PI3K/Akt Pathways

Xiao Man Wu, Wen Qin Chen, Yi Wei Hu, Lu Cao, Pin Nie, Ming Xian Chang

Front Immunol. 2018; 9: 726. Published online 2018 Apr 10. doi: 10.3389/fimmu.2018.00726

PMCID:: PMC5903030

Abstract Article PDF–11M

Select item 55780247.

Transcriptome Analysis Reveals Increases in Visceral Lipogenesis and Storage and Activation of the Antigen Processing and Presentation Pathway during the Mouth-Opening Stage in Zebrafish Larvae

Hao Xu, Enxiu Liu, Yun Li, Xiaojie Li, Chenyu Ding

Int J Mol Sci. 2017 Aug; 18(8): 1634. Published online 2017 Jul 31. doi: 10.3390/ijms18081634

PMCID:: PMC5578024

Abstract Article PDF–4.6M

Select item 55601288.

Ex vivo tools for the clonal analysis of zebrafish hematopoiesis

Ondrej Svoboda, David L Stachura, Olga Machonova, Leonard I Zon, David Traver, Petr Bartunek

Nat Protoc. Author manuscript; available in PMC 2017 Aug 17.

Published in final edited form as: Nat Protoc. 2016 May; 11(5): 1007–1020. Published online 2016 Apr 28. doi: 10.1038/nprot.2016.053

PMCID:: PMC5560128

Abstract Article PDF–1.0M

Select item 54627769.

NOD1 deficiency impairs CD44a/Lck as well as PI3K/Akt pathway

Yi Wei Hu, Xiao Man Wu, Shi Si Ren, Lu Cao, Pin Nie, Ming Xian Chang

Sci Rep. 2017; 7: 2979. Published online 2017 Jun 7. doi: 10.1038/s41598-017-03258-y

PMCID:: PMC5462776

Abstract Article PDF–5.5M

Select item 487073210.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 463413711.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 421934712.

Comprehensive analysis of MHC class II genes in teleost fish genomes reveals dispensability of the peptide-loading DM system in a large part of vertebrates

Johannes M Dijkstra, Unni Grimholt, Jong Leong, Ben F Koop, Keiichiro Hashimoto

BMC Evol Biol. 2013; 13: 260. Published online 2013 Nov 26. doi: 10.1186/1471-2148-13-260

PMCID:: PMC4219347

Abstract Article PDF–1.7M

Select item 378630413.

Olfactory imprinting is triggered by MHC peptide ligands

Cornelia Hinz, ri Namekawa, Jasminca Behrmann-Godel, Claus Oppelt, Aaron Jaeschke, Anke Müller, Rainer W. Friedrich, Gabriele Gerlach

Sci Rep. 2013; 3: 2800. Published online 2013 Sep 30. doi: 10.1038/srep02800

Correction in:: Sci Rep. 2014; 4: 3385.

PMCID:: PMC3786304

Abstract Article PDF–1.3M

Select item 360045914.

Zebrafish model for allogeneic hematopoietic cell transplantation not requiring preconditioning

Isabell Hess, Norimasa Iwanami, Michael Schorpp, Thomas Boehm

Proc Natl Acad Sci U S A. 2013 Mar 12; 110(11): 4327–4332. Published online 2013 Feb 19. doi: 10.1073/pnas.1219847110

PMCID:: PMC3600459

Abstract Article PDF–1.1M

Select item 358317115.

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish

Dahai Yang, Qin Liu, Minjun Yang, Haizhen Wu, Qiyao Wang, Jingfan Xiao, Yuanxing Zhang

BMC Genomics. 2012; 13: 319. Published online 2012 Jul 17. doi: 10.1186/1471-2164-13-319

PMCID:: PMC3583171

Abstract Article PDF–1.7M

Select item 351963116.

Influence of Kinship and MHC Class II Genotype on Visual Traits in Zebrafish Larvae (Danio rerio)

Cornelia Hinz, Katharina Gebhardt, Alexander K. Hartmann, Lauren Sigman, Gabriele Gerlach

PLoS One. 2012; 7(12): e51182. Published online 2012 Dec 10. doi: 10.1371/journal.pone.0051182

PMCID:: PMC3519631

Abstract Article PDF–519K

Select item 317805917.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 298154318.

Eosinophils in the zebrafish: prospective isolation, characterization, and eosinophilia induction by helminth determinants

Keir M. Balla, Geanncarlo Lugo-Villarino, Jan M. Spitsbergen, David L. Stachura, Yan Hu, Karina Bañuelos, Octavio Romo-Fewell, Raffi V. Aroian, David Traver

Blood. 2010 Nov 11; 116(19): 3944–3954. Prepublished online 2010 Aug 16. doi: 10.1182/blood-2010-03-267419