PMC Links for GEO Profiles (Select 13728393) - PMC

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Items: 18

Select item 110730851.

Functional screening of congenital heart disease risk loci identifies 5 genes essential for heart development in zebrafish

Jianlong Ma, Yayun Gu, Juanjuan Liu, Jingmei Song, Tao Zhou, Min Jiang, Yang Wen, Xuejiang Guo, Zuomin Zhou, Jiahao Sha, Jianbo He, Zhibin Hu, Lingfei Luo, Mingxi Liu

Cell Mol Life Sci. 2023 Jan; 80(1): 19. Published online 2022 Dec 27. doi: 10.1007/s00018-022-04669-5

PMCID:: PMC11073085

Abstract Article PDF–4.0M

Select item 94298282.

Regulatory T cells regulate blastemal proliferation during zebrafish caudal fin regeneration

Subhra P. Hui, Kotaro Sugimoto, Delicia Z. Sheng, Kazu Kikuchi

Front Immunol. 2022; 13: 981000. Published online 2022 Aug 17. doi: 10.3389/fimmu.2022.981000

PMCID:: PMC9429828

Abstract Article PDF–12M

Select item 89875093.

Zebrafish as a Vertebrate Model for Studying Nodavirus Infections

Raquel Lama, Patricia Pereiro, Antonio Figueras, Beatriz Novoa

Front Immunol. 2022; 13: 863096. Published online 2022 Mar 24. doi: 10.3389/fimmu.2022.863096

PMCID:: PMC8987509

Abstract Article PDF–17M

Select item 73517384.

Klf9 is a key feedforward regulator of the transcriptomic response to glucocorticoid receptor activity

Ian Gans, Ellen I. Hartig, Shusen Zhu, Andrea R. Tilden, Lucie N. Hutchins, Nathaniel J. Maki, Joel H. Graber, James A. Coffman

Sci Rep. 2020; 10: 11415. Published online 2020 Jul 10. doi: 10.1038/s41598-020-68040-z

PMCID:: PMC7351738

Abstract Article PDF–1.5M

Select item 72372085.

Zebrafish macrophage developmental arrest underlies depletion of microglia and reveals Csf1r-independent metaphocytes

Laura E Kuil, Nynke Oosterhof, Giuliano Ferrero, Tereza Mikulášová, Martina Hason, Jordy Dekker, Mireia Rovira, Herma C van der Linde, Paulina MH van Strien, Emma de Pater, Gerben Schaaf, Erik MJ Bindels, Valerie Wittamer, Tjakko J van Ham

eLife. 2020; 9: e53403. Published online 2020 May 5. doi: 10.7554/eLife.53403

PMCID:: PMC7237208

Abstract Article PDF–13M

Select item 70649446.

The macrophage‐expressed gene (mpeg) 1 identifies a subpopulation of B cells in the adult zebrafish

Giuliano Ferrero, Etienne Gomez, Sowmya lyer, Mireia Rovira, Magali Miserocchi, David M. Langenau, Julien Y. Bertrand, Valérie Wittamer

J Leukoc Biol. 2020 Mar; 107(3): 431–443. Published online 2020 Jan 7. doi: 10.1002/JLB.1A1119-223R

PMCID:: PMC7064944

Abstract Article PDF–3.8M

Select item 67388807.

Proinflammatory Caspase A Activation and an Antiviral State Are Induced by a Zebrafish Perforin after Possible Cellular and Functional Diversification from a Myeloid Ancestor

Mónica Varela, Gabriel Forn-Cuní, Sonia Dios, Antonio Figueras, Beatriz Novoa

J Innate Immun. 2016 Jan; 8(1): 43–56. Published online 2015 Jun 18. doi: 10.1159/000431287

PMCID:: PMC6738880

Abstract Article PDF–1.1M

Select item 64992188.

RNAseq Profiling of Leukocyte Populations in Zebrafish Larvae Reveals a cxcl11 Chemokine Gene as a Marker of Macrophage Polarization During Mycobacterial Infection

Julien Rougeot, Vincenzo Torraca, Ania Zakrzewska, Zakia Kanwal, Hans J. Jansen, Frida Sommer, Herman P. Spaink, Annemarie H. Meijer

Front Immunol. 2019; 10: 832. Published online 2019 Apr 17. doi: 10.3389/fimmu.2019.00832

Correction in:: Front Immunol. 2019; 10: 2720.

PMCID:: PMC6499218

Abstract Article PDF–3.9M

Select item 59834169.

Pituitary adenylate cyclase–activating polypeptide (PACAP-38) plays an inhibitory role against inflammation induced by chemical damage to zebrafish hair cells

Natalia Kasica-Jarosz, Piotr Podlasz, Jerzy Kaleczyc

PLoS One. 2018; 13(6): e0198180. Published online 2018 Jun 1. doi: 10.1371/journal.pone.0198180

PMCID:: PMC5983416

Abstract Article PDF–3.2M

Select item 572549810.

Single-cell RNA-sequencing uncovers transcriptional states and fate decisions in haematopoiesis

Emmanouil I. Athanasiadis, Jan G. Botthof, Helena Andres, Lauren Ferreira, Pietro Lio, Ana Cvejic

Nat Commun. 2017; 8: 2045. Published online 2017 Dec 11. doi: 10.1038/s41467-017-02305-6

PMCID:: PMC5725498

Abstract Article PDF–2.4M

Select item 562640611.

Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single-cell resolution using RNA sequencing

Qin Tang, Sowmya Iyer, Riadh Lobbardi, John C. Moore, Huidong Chen, Caleb Lareau, Christine Hebert, McKenzie L. Shaw, Cyril Neftel, Mario L. Suva, Craig J. Ceol, Andre Bernards, Martin Aryee, Luca Pinello, Iain A. Drummond, David M. Langenau

J Exp Med. 2017 Oct 2; 214(10): 2875–2887. doi: 10.1084/jem.20170976

PMCID:: PMC5626406

Abstract Article PDF–2.2M

Select item 556012812.

Ex vivo tools for the clonal analysis of zebrafish hematopoiesis

Ondrej Svoboda, David L Stachura, Olga Machonova, Leonard I Zon, David Traver, Petr Bartunek

Nat Protoc. Author manuscript; available in PMC 2017 Aug 17.

Published in final edited form as: Nat Protoc. 2016 May; 11(5): 1007–1020. Published online 2016 Apr 28. doi: 10.1038/nprot.2016.053

PMCID:: PMC5560128

Abstract Article PDF–1.0M

Select item 546590313.

Loss of the homologous recombination gene rad51 leads to Fanconi anemia-like symptoms in zebrafish

Jan Gregor Botthof, Ewa Bielczyk-Maczyńska, Lauren Ferreira, Ana Cvejic

Proc Natl Acad Sci U S A. 2017 May 30; 114(22): E4452–E4461. Published online 2017 May 16. doi: 10.1073/pnas.1620631114

PMCID:: PMC5465903

Abstract Article PDF–1.5M

Select item 500461814.

Cortisol-treated zebrafish embryos develop into pro-inflammatory adults with aberrant immune gene regulation

Ellen I. Hartig, Shusen Zhu, Benjamin L. King, James A. Coffman

Biol Open. 2016 Aug 15; 5(8): 1134–1141. Published online 2016 Jul 21. doi: 10.1242/bio.020065

PMCID:: PMC5004618

Abstract Article PDF–863K

Select item 463413715.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 417874616.

Cellular Visualization of Macrophage Pyroptosis and Interleukin-1β Release in a Viral Hemorrhagic Infection in Zebrafish Larvae

Mónica Varela, Alejandro Romero, Sonia Dios, Michiel van der Vaart, Antonio Figueras, Annemarie H. Meijer, Beatriz Novoa

J Virol. 2014 Oct; 88(20): 12026–12040. doi: 10.1128/JVI.02056-14

PMCID:: PMC4178746

Abstract Article PDF–4.5M

Select item 317805917.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 52895918.

Hematopoietic gene expression profile in zebrafish kidney marrow

Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen

Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101