PMC Links for GEO Profiles (Select 13727162) - PMC

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Items: 14

Select item 98783201.

An environmentally relevant concentration of antibiotics impairs the immune system of zebrafish (Danio rerio) and increases susceptibility to virus infection

Patricia Pereiro, Magalí Rey-Campos, Antonio Figueras, Beatriz Novoa

Front Immunol. 2022; 13: 1100092. Published online 2023 Jan 12. doi: 10.3389/fimmu.2022.1100092

PMCID:: PMC9878320

Abstract Article PDF–7.8M

Select item 75182432.

Cell type specific gene expression profiling reveals a role for complement component C3 in neutrophil responses to tissue damage

Ruth A. Houseright, Emily E. Rosowski, Pui-Ying Lam, Sebastien J. M. Tauzin, Oscar Mulvaney, Colin N. Dewey, Anna Huttenlocher

Sci Rep. 2020; 10: 15716. Published online 2020 Sep 24. doi: 10.1038/s41598-020-72750-9

PMCID:: PMC7518243

Abstract Article PDF–6.5M

Select item 53379743.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 48707324.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 48132065.

Molecular Characterization and Expression Analyses of the Complement Component C8α, C8β and C9 Genes in Yellow Catfish (Pelteobagrusfulvidraco) after the Aeromonashydrophila Challenge

Huan Zheng, Wei Ji, Gui-Rong Zhang, Xiao-Ting Zhang, Ze-Chao Shi, Kai-Jian Wei, Rui-Bin Yang, Jonathan P. A. Gardner

Int J Mol Sci. 2016 Mar; 17(3): 345. Published online 2016 Mar 8. doi: 10.3390/ijms17030345

PMCID:: PMC4813206

Abstract Article PDF–9.0M

Select item 46341376.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 35831717.

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish

Dahai Yang, Qin Liu, Minjun Yang, Haizhen Wu, Qiyao Wang, Jingfan Xiao, Yuanxing Zhang

BMC Genomics. 2012; 13: 319. Published online 2012 Jul 17. doi: 10.1186/1471-2164-13-319

PMCID:: PMC3583171

Abstract Article PDF–1.7M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 29970119.

Zebrafish fin immune responses during high mortality infections with viral haemorrhagic septicemia rhabdovirus. A proteomic and transcriptomic approach

Paloma Encinas, Miguel A Rodriguez-Milla, Beatriz Novoa, Amparo Estepa, Antonio Figueras, Julio Coll

BMC Genomics. 2010; 11: 518. Published online 2010 Sep 27. doi: 10.1186/1471-2164-11-518

PMCID:: PMC2997011

Abstract Article PDF–675K

Select item 273526810.

Enhanced transcription of complement and coagulation genes in the absence of adaptive immunity

Dereje D. Jima, Radhika N. Shah, Timothy M. Orcutt, Deepa Joshi, J. McHugh Law, Gary W. Litman, Nikolaus S. Trede, Jeffrey A. Yoder

Mol Immunol. Author manuscript; available in PMC 2010 Apr 1.

Published in final edited form as: Mol Immunol. 2009 Apr; 46(7): 1505–1516. Published online 2009 Feb 5. doi: 10.1016/j.molimm.2008.12.021

PMCID:: PMC2735268

Abstract Article PDF–1.8M

Select item 244222311.

Zebrafish Whole-Adult-Organism Chemogenomics for Large-Scale Predictive and Discovery Chemical Biology

Siew Hong Lam, Sinnakarupan Mathavan, Yan Tong, Haixia Li, R. Krishna Murthy Karuturi, Yilian Wu, Vinsensius B. Vega, Edison T. Liu, Zhiyuan Gong

PLoS Genet. 2008 Jul; 4(7): e1000121. Published online 2008 Jul 11. doi: 10.1371/journal.pgen.1000121

PMCID:: PMC2442223

Abstract Article PDF–2.0M

Select item 119954612.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305