PMC Links for GEO Profiles (Select 13726818) - PMC

Select item 92934691.

The developmental hourglass model is applicable to the spinal cord based on single‐cell transcriptomes and non‐conserved cis‐regulatory elements

Katsuki Mukaigasa, Chie Sakuma, Hiroyuki Yaginuma

Dev Growth Differ. 2021 Sep; 63(7): 372–391. Published online 2021 Sep 28. doi: 10.1111/dgd.12750

PMCID:: PMC9293469

Abstract Article PDF–5.3M

Select item 89896722.

Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish

Urs L. Böhm, Yukiko Kimura, Takashi Kawashima, Misha B. Ahrens, Shin-ichi Higashijima, Florian Engert, Adam E. Cohen

Neuron. Author manuscript; available in PMC 2023 Apr 6.

Published in final edited form as: Neuron. 2022 Apr 6; 110(7): 1211–1222.e4. Published online 2022 Jan 31. doi: 10.1016/j.neuron.2022.01.001

PMCID:: PMC8989672

Abstract Article PDF–2.5M

Select item 84500013.

Vertebrate cells differentially interpret ciliary and extraciliary cAMP

Melissa E. Truong, Sara Bilekova, Semil P. Choksi, Wan Li, Lukasz J. Bugaj, Ke Xu, Jeremy F. Reiter

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 2911–2926.e18. Published online 2021 Apr 30. doi: 10.1016/j.cell.2021.04.002

PMCID:: PMC8450001

Abstract Article PDF–3.1M

Select item 60078924.

Intracellular calcium mobilization is required for Sonic hedgehog signaling

Dana Klatt Shaw, Derrick Gunther, Michael J. Jurynec, Alexis A. Chagovetz, Erin Ritchie, David Jonah Grunwald

Dev Cell. Author manuscript; available in PMC 2019 May 21.

Published in final edited form as: Dev Cell. 2018 May 21; 45(4): 512–525.e5. Published online 2018 May 10. doi: 10.1016/j.devcel.2018.04.013

PMCID:: PMC6007892

Abstract Article PDF–2.2M

Select item 56878895.

Mutations in DZIP1L, which encodes a ciliary transition zone protein, cause autosomal recessive polycystic kidney disease

Hao Lu, Maria C. Rondón Galeano, Elisabeth Ott, Geraldine Kaeslin, P. Jaya Kausalya, Carina Kramer, Nadina Ortiz-Brüchle, Nadescha Hilger, Vicki Metzis, Milan Hiersche, Shang Yew Tay, Robert Tunningley, Shubha Vij, Andrew D. Courtney, Belinda Whittle, Elke Wühl, Udo Vester, Björn Hartleben, Steffen Neuber, Valeska Frank, Melissa H. Little, Daniel Epting, Peter Papathanasiou, Andrew C. Perkins, Graham D. Wright, Walter Hunziker, Heon Yung Gee, Edgar A. Otto, Klaus Zerres, Friedhelm Hildebrandt, Sudipto Roy, Carol Wicking, Carsten Bergmann

Nat Genet. Author manuscript; available in PMC 2018 Jan 1.

Published in final edited form as: Nat Genet. 2017 Jul; 49(7): 1025–1034. Published online 2017 May 22. doi: 10.1038/ng.3871

PMCID:: PMC5687889

Abstract Article PDF–3.4M

Select item 56666076.

UbcD1 regulates Hedgehog signaling by directly modulating Ci ubiquitination and processing

Chenyu Pan, Yue Xiong, Xiangdong Lv, Yuanxin Xia, Shuo Zhang, Hao Chen, Jialin Fan, Wenqing Wu, Feng Liu, Hailong Wu, Zhaocai Zhou, Lei Zhang, Yun Zhao

EMBO Rep. 2017 Nov; 18(11): 1922–1934. Published online 2017 Sep 8. doi: 10.15252/embr.201643289

PMCID:: PMC5666607

Abstract Article PDF–7.5M

Select item 55441867.

Regulation of Gli ciliary localization and Hedgehog signaling by the PY-NLS/karyopherin-β2 nuclear import system

Yuhong Han, Yue Xiong, Xuanming Shi, Jiang Wu, Yun Zhao, Jin Jiang

PLoS Biol. 2017 Aug; 15(8): e2002063. Published online 2017 Aug 4. doi: 10.1371/journal.pbio.2002063

PMCID:: PMC5544186

Abstract Article PDF–1.8M

Select item 44926058.

Conserved Noncoding Sequences Regulate lhx5 Expression in the Zebrafish Forebrain

Liu Sun, Fengjiao Chen, Gang Peng

PLoS One. 2015; 10(7): e0132525. Published online 2015 Jul 6. doi: 10.1371/journal.pone.0132525

PMCID:: PMC4492605

Abstract Article PDF–1.5M

Select item 38287679.

Targeted inactivation and identification of targets of the Gli2a transcription factor in the zebrafish

Xingang Wang, Zhonghua Zhao, Julius Muller, Audrey Iyu, Alexis Jiaying Khng, Ernesto Guccione, Yijun Ruan, Philip W. Ingham

Biol Open. 2013 Nov 15; 2(11): 1203–1213. Published online 2013 Sep 9. doi: 10.1242/bio.20136262

PMCID:: PMC3828767

Abstract Article PDF–1.3M

Select item 321049410.

Roles of Hedgehog pathway components and retinoic acid signalling in specifying zebrafish ventral spinal cord neurons

Samantha England, Manuel F. Batista, John K. Mich, James K. Chen, Katharine E. Lewis

Development. 2011 Dec 1; 138(23): 5121–5134. doi: 10.1242/dev.066159

PMCID:: PMC3210494

Abstract Article

Select item 320489811.

Fused has evolved divergent roles in vertebrate Hedgehog signaling and motile ciliogenesis

Christopher W. Wilson, Catherine T. Nguyen, Miao-Hsueh Chen, Jehn-Hsiahn Yang, Rhodora Gacayan, Jie Huang, Jau-Nian Chen, Pao-Tien Chuang

Nature. Author manuscript; available in PMC 2011 Oct 31.

Published in final edited form as: Nature. 2009 May 7; 459(7243): 98–102. Published online 2009 Mar 22. doi: 10.1038/nature07883

PMCID:: PMC3204898

Abstract Article PDF–1.2M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 279041713.

Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphé neurones and cranial motoneurones

Will H. Norton, Maryam Mangoli, Zsolt Lele, Hans-Martin Pogoda, Brianne Diamond, Sara Mercurio, Claire Russell, Hiroki Teraoka, Heather L. Stickney, Gerd-Jörg Rauch, Carl-Philipp Heisenberg, Corinne Houart, Thomas F. Schilling, Hans-Georg Frohnhoefer, Sepand Rastegar, Carl J. Neumann, R. Mark Gardiner, Uwe Strähle, Robert Geisler, Michelle Rees, William S. Talbot, Stephen W. Wilson

Development. Author manuscript; available in PMC 2009 Dec 8.

Published in final edited form as: Development. 2005 Feb; 132(4): 645–658. doi: 10.1242/dev.01611

PMCID:: PMC2790417

Abstract Article PDF–3.0M

Select item 273036614.

Dampened Hedgehog signaling but normal Wnt signaling in zebrafish without cilia

Peng Huang, Alexander F. Schier

Development. 2009 Sep 15; 136(18): 3089–3098. Published online 2009 Aug 21. doi: 10.1242/dev.041343

PMCID:: PMC2730366

Abstract Article

Select item 265759715.

CNS-derived glia ensheath peripheral nerves and mediate motor root development

Sarah Kucenas, Norio Takada, Hae-Chul Park, Elvin Woodruff, Kendal Broadie, Bruce Appel

Nat Neurosci. Author manuscript; available in PMC 2009 Mar 18.

Published in final edited form as: Nat Neurosci. 2008 Feb; 11(2): 143–151. Published online 2008 Jan 6. doi: 10.1038/nn2025

PMCID:: PMC2657597

Abstract Article PDF–3.8M

Select item 183221916.

Jagged-mediated Notch signaling maintains proliferating neural progenitors and regulates cell diversity in the ventral spinal cord

Sang-Yeob Yeo, Ajay B. Chitnis

Proc Natl Acad Sci U S A. 2007 Apr 3; 104(14): 5913–5918. Published online 2007 Mar 26. doi: 10.1073/pnas.0607062104

PMCID:: PMC1832219

Abstract Article PDF–2.2M

Select item 160208117.

Genomewide Expression Profiling in the Zebrafish Embryo Identifies Target Genes Regulated by Hedgehog Signaling During Vertebrate Development

Jun Xu, Bhylahalli P. Srinivas, Shang Yew Tay, Alicia Mak, Xianwen Yu, Serene G. P. Lee, Henry Yang, Kunde R. Govindarajan, Bernard Leong, Guillaume Bourque, Sinnakarupan Mathavan, Sudipto Roy

Genetics. 2006 Oct; 174(2): 735–752. doi: 10.1534/genetics.106.061523

PMCID:: PMC1602081

Abstract Article PDF–5.4M

Select item 108012918.

Medial floor plate formation in zebrafish consists of two phases and requires trunk-derived Midkine-a

Matthias Schäfer, Martina Rembold, Joachim Wittbrodt, Manfred Schartl, Christoph Winkler

Genes Dev. 2005 Apr 15; 19(8): 897–902. doi: 10.1101/gad.336305

PMCID:: PMC1080129

Abstract Article PDF–372K

Select item 13924119.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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