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Items: 13

1.
Three-dimensional molecular architecture of mouse organogenesis
Fangfang Qu, Wenjia Li, Jian Xu, Ruifang Zhang, Jincan Ke, Xiaodie Ren, Xiaogao Meng, Lexin Qin, Jingna Zhang, Fangru Lu, Xin Zhou, Xi Luo, Zhen Zhang, Minhan Wang, Guangming Wu, Duanqing Pei, Jiekai Chen, Guizhong Cui, Shengbao Suo, Guangdun Peng
Nat Commun. 2023; 14: 4599. Published online 2023 Jul 31. doi: 10.1038/s41467-023-40155-7
PMCID:
PMC10390492
AbstractArticlePDF–13M
2.
Single-cell transcriptomic signatures and gene regulatory networks modulated by Wls in mammalian midline facial formation and clefts
Ran Gu, Shuwen Zhang, Subbroto Kumar Saha, Yu Ji, Kurt Reynolds, Moira McMahon, Bo Sun, Mohammad Islam, Paul A. Trainor, YiPing Chen, Ying Xu, Yang Chai, Diana Burkart-Waco, Chengji J. Zhou
Development. 2022 Jul 15; 149(14): dev200533. Published online 2022 Jul 22. doi: 10.1242/dev.200533
PMCID:
PMC9382898
AbstractArticle
3.
Variation in Activity State, Axonal Projection, and Position Define the Transcriptional Identity of Individual Neocortical Projection Neurons
Maxime Chevée, Johanna De Jong Robertson, Gabrielle Heather Cannon, Solange Pezon Brown, Loyal Andrew Goff
Cell Rep. Author manuscript; available in PMC 2018 Mar 22.
Published in final edited form as: Cell Rep. 2018 Jan 9; 22(2): 441–455. doi: 10.1016/j.celrep.2017.12.046
PMCID:
PMC5863578
AbstractArticlePDF–1.3M
4.
Gene expression analysis of the embryonic subplate
Franziska M. Oeschger, Wei-Zhi Wang, Sheena Lee, Fernando García-Moreno, André M. Goffinet, Mariona Arbones, Sonia Rakic, Zoltán Molnár
Cereb Cortex. Author manuscript; available in PMC 2016 Aug 3.
Published in final edited form as: Cereb Cortex. 2012 Jun; 22(6): 1343–1359. Published online 2011 Aug 22. doi: 10.1093/cercor/bhr197
PMCID:
PMC4972418
AbstractArticlePDF–7.1M
5.
Dlx genes pattern mammalian jaw primordium by regulating both lower jaw-specific and upper jaw-specific genetic programs
Juhee Jeong, Xue Li, Robert J. McEvilly, Michael G. Rosenfeld, Thomas Lufkin, John L. R. Rubenstein
Development. Author manuscript; available in PMC 2016 Jun 20.
Published in final edited form as: Development. 2008 Sep; 135(17): 2905–2916. doi: 10.1242/dev.019778
PMCID:
PMC4913551
AbstractArticlePDF–1005K
6.
Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain
Loyal A. Goff, Abigail F. Groff, Martin Sauvageau, Zachary Trayes-Gibson, Diana B. Sanchez-Gomez, Michael Morse, Ryan D. Martin, Lara E. Elcavage, Stephen C. Liapis, Meryem Gonzalez-Celeiro, Olivia Plana, Eric Li, Chiara Gerhardinger, Giulio S. Tomassy, Paola Arlotta, John L. Rinn
Proc Natl Acad Sci U S A. 2015 Jun 2; 112(22): 6855–6862. Published online 2015 Jun 1. doi: 10.1073/pnas.1411263112
PMCID:
PMC4460505
AbstractArticlePDF–2.4M
7.
Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs
Ka-Man Venus Lai, Guochun Gong, Amanda Atanasio, José Rojas, Joseph Quispe, Julita Posca, Derek White, Mei Huang, Daria Fedorova, Craig Grant, Lawrence Miloscio, Gustavo Droguett, William T. Poueymirou, Wojtek Auerbach, George D. Yancopoulos, David Frendewey, John Rinn, David M. Valenzuela
PLoS One. 2015; 10(4): e0125522. Published online 2015 Apr 24. doi: 10.1371/journal.pone.0125522
PMCID:
PMC4409293
AbstractArticlePDF–20M
8.
The Vertebrate Genome Annotation browser 10 years on
Jennifer L. Harrow, Charles A. Steward, Adam Frankish, James G. Gilbert, Jose M. Gonzalez, Jane E. Loveland, Jonathan Mudge, Dan Sheppard, Mark Thomas, Stephen Trevanion, Laurens G. Wilming
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D771–D779. Published online 2013 Dec 6. doi: 10.1093/nar/gkt1241
PMCID:
PMC3964964
AbstractArticlePDF–11M
9.
Multiple knockout mouse models reveal lincRNAs are required for life and brain development
Martin Sauvageau, Loyal A Goff, Simona Lodato, Boyan Bonev, Abigail F Groff, Chiara Gerhardinger, Diana B Sanchez-Gomez, Ezgi Hacisuleyman, Eric Li, Matthew Spence, Stephen C Liapis, William Mallard, Michael Morse, Mavis R Swerdel, Michael F D’Ecclessis, Jennifer C Moore, Venus Lai, Guochun Gong, George D Yancopoulos, David Frendewey, Manolis Kellis, Ronald P Hart, David M Valenzuela, Paola Arlotta, John L Rinn
eLife. 2013; 2: e01749. Published online 2013 Dec 31. doi: 10.7554/eLife.01749
PMCID:
PMC3874104
AbstractArticlePDF–4.6M
10.
Spatial and Temporal Analysis of Gene Expression during Growth and Fusion of the Mouse Facial Prominences
Weiguo Feng, Sonia M. Leach, Hannah Tipney, Tzulip Phang, Mark Geraci, Richard A. Spritz, Lawrence E. Hunter, Trevor Williams
PLoS One. 2009; 4(12): e8066. Published online 2009 Dec 16. doi: 10.1371/journal.pone.0008066
PMCID:
PMC2789411
AbstractArticlePDF–3.6M
11.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
12.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
13.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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