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Items: 1 to 20 of 35

1.
Secretion of endoplasmic reticulum protein VAPB/ALS8 requires topological inversion
Kosuke Kamemura, Rio Kozono, Mizuki Tando, Misako Okumura, Daisuke Koga, Satoshi Kusumi, Kanako Tamai, Aoi Okumura, Sayaka Sekine, Daichi Kamiyama, Takahiro Chihara
Nat Commun. 2024; 15: 8777. Published online 2024 Oct 10. doi: 10.1038/s41467-024-53097-5
PMCID:
PMC11467184
AbstractArticlePDF–3.2M
2.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
3.
Transcription Factor Acj6 Controls Dendrite Targeting via A Combinatorial Cell-Surface Code
Qijing Xie, Jiefu Li, Hongjie Li, Namrata D Udeshi, Tanya Svinkina, Daniel Orlin, Sayeh Kohani, Ricardo Guajardo, DR Mani, Chuanyun Xu, Tongchao Li, Shuo Han, Wei Wei, S Andrew Shuster, David J Luginbuhl, Stephen R. Quake, Swetha E. Murthy, Alice Y Ting, Steven A Carr, Liqun Luo
Neuron. Author manuscript; available in PMC 2023 Jul 20.
Published in final edited form as: Neuron. 2022 Jul 20; 110(14): 2299–2314.e8. Published online 2022 May 24. doi: 10.1016/j.neuron.2022.04.026
PMCID:
PMC9308693
AbstractArticlePDF–3.9M
4.
Toxicities of amyloid-beta and tau protein are reciprocally enhanced in the Drosophila model
Zhen-Dong Sun, Jia-Xin Hu, Jia-Rui Wu, Bing Zhou, Yun-Peng Huang
Neural Regen Res. 2022 Oct; 17(10): 2286–2292. Published online 2022 Feb 28. doi: 10.4103/1673-5374.336872
PMCID:
PMC9083152
AbstractArticlePDF–5.9M
5.
Identification and bioinformatic analysis of neprilysin and neprilysin-like metalloendopeptidases in Drosophila melanogaster
Heiko Meyer, Annika Buhr, Patrick Callaerts, Ronja Schiemann, Mariana F. Wolfner, Steven J. Marygold
MicroPubl Biol. 2021; 2021: 10.17912/micropub.biology.000410. Published online 2021 Jun 23. doi: 10.17912/micropub.biology.000410
PMCID:
PMC8223033
AbstractArticlePDF–296K
6.
Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators
Jiefu Li, Shuo Han, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina, D. R. Mani, Chuanyun Xu, Ricardo Guajardo, Qijing Xie, Tongchao Li, David J. Luginbuhl, Bing Wu, Colleen N. McLaughlin, Anthony Xie, Pornchai Kaewsapsak, Stephen R. Quake, Steven A. Carr, Alice Y. Ting, Liqun Luo
Cell. Author manuscript; available in PMC 2021 Jan 23.
Published in final edited form as: Cell. 2020 Jan 23; 180(2): 373–386.e15. Published online 2020 Jan 16. doi: 10.1016/j.cell.2019.12.029
PMCID:
PMC7072036
AbstractArticlePDF–2.8M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
Drosophila Neprilysins Are Involved in Middle-Term and Long-Term Memory
Oriane Turrel, Aurélie Lampin-Saint-Amaux, Thomas Préat, Valérie Goguel
J Neurosci. 2016 Sep 14; 36(37): 9535–9546. doi: 10.1523/JNEUROSCI.3730-15.2016
PMCID:
PMC6601947
AbstractArticlePDF–2.6M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
11.
EDEM function in ERAD protects against chronic ER proteinopathy and age-related physiological decline in Drosophila
Michiko Sekiya, Akiko Maruko-Otake, Stephen Hearn, Yasufumi Sakakibara, Naoki Fujisaki, Emiko Suzuki, Kanae Ando, Koichi M. Iijima
Dev Cell. Author manuscript; available in PMC 2018 Jun 19.
Published in final edited form as: Dev Cell. 2017 Jun 19; 41(6): 652–664.e5. doi: 10.1016/j.devcel.2017.05.019
PMCID:
PMC5559287
AbstractArticlePDF–1.1M
12.
Nociceptor-enriched genes required for normal thermal nociception
Ken Honjo, Stephanie E. Mauthner, Yu Wang, J.H. Pate Skene, W. Daniel Tracey, Jr.
Cell Rep. Author manuscript; available in PMC 2017 Mar 2.
Published in final edited form as: Cell Rep. 2016 Jul 12; 16(2): 295–303. Published online 2016 Jun 23. doi: 10.1016/j.celrep.2016.06.003
PMCID:
PMC5333372
AbstractArticlePDF–1.6M
13.
Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis
Wei-Hsiang Lin, Carlo N. G. Giachello, Richard A. Baines
Dis Model Mech. 2017 Feb 1; 10(2): 141–150. doi: 10.1242/dmm.027045
PMCID:
PMC5312004
AbstractArticle
14.
Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes
Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili
Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062
PMCID:
PMC4738005
AbstractArticlePDF–205K
15.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
16.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
19.
Neprilysins: An Evolutionarily Conserved Family of Metalloproteases That Play Important Roles in Reproduction in Drosophila
Jessica L. Sitnik, Carmen Francis, Korneel Hens, Roger Huybrechts, Mariana F. Wolfner, Patrick Callaerts
Genetics. 2014 Mar; 196(3): 781–797. Published online 2014 Jan 6. doi: 10.1534/genetics.113.160945
PMCID:
PMC3948806
AbstractArticlePDF–4.1M
20.
Inhibition of human high affinity copper importer Ctr1 orthologous in the nervous system of Drosophila ameliorates Aβ42-induced alzheimer’s disease-like symptoms
Minglin Lang, Qiangwang Fan, Lei Wang, Yajun Zheng, Guiran Xiao, Xiaoxi Wang, Wei Wang, Yi Zhong, Bing Zhou
Neurobiol Aging. Author manuscript; available in PMC 2014 Nov 1.
Published in final edited form as: Neurobiol Aging. 2013 Nov; 34(11): 2604–2612. Published online 2013 Jul 2. doi: 10.1016/j.neurobiolaging.2013.05.029
PMCID:
PMC3770863
AbstractArticlePDF–3.5M

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