PMC Links for GEO Profiles (Select 129979962) - PMC

Koichiro Ono, Kenji Hata, Eriko Nakamura, Shota Ishihara, Sachi Kobayashi, Masako Nakanishi, Michiko Yoshida, Yoshifumi Takahata, Tomohiko Murakami, Seiichi Takenoshita, Toshihisa Komori, Riko Nishimura, Toshiyuki Yoneda

Commun Biol. 2021; 4: 326. Published online 2021 Mar 11. doi: 10.1038/s42003-021-01848-1

PMCID:: PMC7952723

Abstract Article PDF–2.3M

Select item 79387704.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 74857255.

Dynamics of telomeric repeat-containing RNA expression in early embryonic cleavage stages with regards to maternal age

Paweł Kordowitzki, Isabel López de Silanes, Ana Guío-Carrión, Maria A. Blasco

Aging (Albany NY) 2020 Aug 31; 12(16): 15906–15917. Published online 2020 Aug 29. doi: 10.18632/aging.103922

PMCID:: PMC7485725

Abstract Article PDF–1.1M

Select item 69544206.

Heterochromatin protein 1α interacts with parallel RNA and DNA G-quadruplexes

Ruby J Roach, Miguel Garavís, Carlos González, Geoffrey B Jameson, Vyacheslav V Filichev, Tracy K Hale

Nucleic Acids Res. 2020 Jan 24; 48(2): 682–693. Published online 2019 Dec 4. doi: 10.1093/nar/gkz1138

PMCID:: PMC6954420

Abstract Article PDF–2.1M

Select item 67019277.

TERRA regulate the transcriptional landscape of pluripotent cells through TRF1-dependent recruitment of PRC2

Rosa María Marión, Juan J Montero, Isabel López de Silanes, Osvaldo Graña-Castro, Paula Martínez, Stefan Schoeftner, José Alejandro Palacios-Fábrega, Maria A Blasco

eLife. 2019; 8: e44656. Published online 2019 Aug 20. doi: 10.7554/eLife.44656

PMCID:: PMC6701927

Abstract Article PDF–3.4M

Select item 64830568.

Characterization of telomeric repeat-containing RNA (TERRA) localization and protein interactions in primordial germ cells of the mouse

Miguel A Brieño-Enríquez, Steffanie L Moak, Anyul Abud-Flores, Paula E Cohen

Biol Reprod. 2019 Apr; 100(4): 950–962. Published online 2018 Nov 13. doi: 10.1093/biolre/ioy243

PMCID:: PMC6483056

Abstract Article PDF–4.2M

Select item 63267839.

Telomere shortening by transgenerational transmission of TNF-α-induced TERRA via ATF7

Binbin Liu, Toshio Maekawa, Keisuke Yoshida, Nhung Hong Ly, Kimiko Inoue, Ayumi Hasegawa, Bruno Chatton, Atsuo Ogura, Shunsuke Ishii

Nucleic Acids Res. 2019 Jan 10; 47(1): 283–298. Published online 2018 Nov 8. doi: 10.1093/nar/gky1149

PMCID:: PMC6326783

Abstract Article PDF–5.3M

Select item 572738910.

CTCF driven TERRA transcription facilitates completion of telomere DNA replication

Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M. Lieberman

Nat Commun. 2017; 8: 2114. Published online 2017 Dec 13. doi: 10.1038/s41467-017-02212-w

PMCID:: PMC5727389

Abstract Article PDF–5.2M

Select item 509445311.

Corticothalamic projection neuron development beyond subtype specification: Fog2 and intersectional controls regulate intra-class neuronal diversity

Maria J. Galazo, Jason G. Emsley, Jeffrey D. Macklis

Neuron. Author manuscript; available in PMC 2017 Jul 6.

Published in final edited form as: Neuron. 2016 Jul 6; 91(1): 90–106. Published online 2016 Jun 16. doi: 10.1016/j.neuron.2016.05.024

PMCID:: PMC5094453

Abstract Article PDF–1.6M

Select item 379774812.

The AERO System: A 3D-Like Approach for Recording Gene Expression Patterns in the Whole Mouse Embryo

Hirohito Shimizu, Atsushi Kubo, Kenta Uchibe, Megumi Hashimoto, Shigetoshi Yokoyama, Shuji Takada, Kazuhiko Mitsuoka, Hiroshi Asahara

PLoS One. 2013; 8(10): e75754. Published online 2013 Oct 16. doi: 10.1371/journal.pone.0075754

PMCID:: PMC3797748

Abstract Article PDF–564K

Select item 352368713.

Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice

Lisa S. Andersson, Martin Larhammar, Fatima Memic, Hanna Wootz, Doreen Schwochow, Carl-Johan Rubin, Kalicharan Patra, Thorvaldur Arnason, Lisbeth Wellbring, Göran Hjälm, Freyja Imsland, Jessica L. Petersen, Molly E. McCue, James R. Mickelson, Gus Cothran, Nadav Ahituv, Lars Roepstorff, Sofia Mikko, Anna Vallstedt, Gabriella Lindgren, Leif Andersson, Klas Kullander

Nature. Author manuscript; available in PMC 2012 Dec 17.

Published in final edited form as: Nature. 2012 Aug 30; 488(7413): 642–646. doi: 10.1038/nature11399

PMCID:: PMC3523687

Abstract Article PDF–2.6M

Select item 323510514.

Global Gene Expression Analysis of Murine Limb Development

Leila Taher, Nicole M. Collette, Deepa Murugesh, Evan Maxwell, Ivan Ovcharenko, Gabriela G. Loots

PLoS One. 2011; 6(12): e28358. Published online 2011 Dec 9. doi: 10.1371/journal.pone.0028358

PMCID:: PMC3235105

Abstract Article PDF–4.5M

Select item 317805915.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015116.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 302253417.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 301097818.

Left-Right Function of dmrt2 Genes Is Not Conserved between Zebrafish and Mouse

Raquel Lourenço, Susana S. Lopes, Leonor Saúde

PLoS One. 2010; 5(12): e14438. Published online 2010 Dec 28. doi: 10.1371/journal.pone.0014438

PMCID:: PMC3010978

Abstract Article PDF–350K

Select item 284855319.

A Pax3/Dmrt2/Myf5 Regulatory Cascade Functions at the Onset of Myogenesis

Takahiko Sato, Didier Rocancourt, Luís Marques, Sólveig Thorsteinsdóttir, Margaret Buckingham

PLoS Genet. 2010 Apr; 6(4): e1000897. Published online 2010 Apr 1. doi: 10.1371/journal.pgen.1000897

PMCID:: PMC2848553

Abstract Article PDF–2.8M

Select item 196477220.

Deletion of Ultraconserved Elements Yields Viable Mice

Nadav Ahituv, Yiwen Zhu, Axel Visel, Amy Holt, Veena Afzal, Len A Pennacchio, Edward M Rubin

PLoS Biol. 2007 Sep; 5(9): e234. Published online 2007 Sep 4. doi: 10.1371/journal.pbio.0050234

PMCID:: PMC1964772

Abstract Article PDF–311K

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