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Select item 79387701.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 69942472.

Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells

Samudyata, Paulo P. Amaral, Pär G. Engström, Samuel C. Robson, Michael L. Nielsen, Tony Kouzarides, Gonçalo Castelo-Branco

Exp Cell Res. Author manuscript; available in PMC 2020 Aug 1.

Published in final edited form as: Exp Cell Res. 2019 Aug 1; 381(1): 129–138. Published online 2019 May 9. doi: 10.1016/j.yexcr.2019.05.006

PMCID:: PMC6994247

Abstract Article PDF–1.6M

Select item 63825883.

DNA breaks in Ig V regions are predominantly single-stranded and are generated by UNG and MSH6 DNA repair pathways

Kimberly J. Zanotti, Robert W. Maul, William Yang, Patricia J. Gearhart

J Immunol. Author manuscript; available in PMC 2020 Mar 1.

Published in final edited form as: J Immunol. 2019 Mar 1; 202(5): 1573–1581. Published online 2019 Jan 21. doi: 10.4049/jimmunol.1801183

PMCID:: PMC6382588

Abstract Article PDF–1.5M

Select item 53812264.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 51228525.

Epigenetic Enhancement of the Post-replicative DNA Mismatch Repair of Mammalian Genomes by a Hemi-^mCpG-Np95-Dnmt1 Axis

Keh-Yang Wang, Chun-Chang Chen, Shih-Feng Tsai, Che-Kun James Shen

Sci Rep. 2016; 6: 37490. Published online 2016 Nov 25. doi: 10.1038/srep37490

PMCID:: PMC5122852

Abstract Article PDF–2.3M

Select item 49561706.

Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice

Jabier Gallego-Llamas, Andrew E. Timms, Rose Pitstick, Janet Peters, George A. Carlson, David R. Beier

PLoS One. 2016; 11(7): e0159377. Published online 2016 Jul 21. doi: 10.1371/journal.pone.0159377

PMCID:: PMC4956170

Abstract Article PDF–491K

Select item 49488517.

A MutSβ-Dependent Contribution of MutSα to Repeat Expansions in Fragile X Premutation Mice?

Xiao-Nan Zhao, Rachel Lokanga, Kimaada Allette, Inbal Gazy, Di Wu, Karen Usdin

PLoS Genet. 2016 Jul; 12(7): e1006190. Published online 2016 Jul 18. doi: 10.1371/journal.pgen.1006190

PMCID:: PMC4948851

Abstract Article PDF–1.5M

Select item 46861368.

Systematic Identification of Factors for Provirus Silencing in Embryonic Stem Cells

Bin Xia Yang, Chadi A. EL Farran, Hong Chao Guo, Tao Yu, Hai Tong Fang, Hao Fei Wang, Sharon Schlesinger, Yu Fen Samantha Seah, Germaine Yen Lin Goh, Suat Peng Neo, Yinghui Li, Matthew C. Lorincz, Vinay Tergaonkar, Tit-Meng Lim, Lingyi Chen, Jayantha Gunaratne, James J. Collins, Stephen P. Goff, George Q. Daley, Hu Li, Frederic A. Bard, Yuin-Han Loh

Cell. Author manuscript; available in PMC 2015 Dec 21.

Published in final edited form as: Cell. 2015 Sep 24; 163(1): 230–245. Published online 2015 Sep 10. doi: 10.1016/j.cell.2015.08.037

PMCID:: PMC4686136

Abstract Article PDF–1.2M

Select item 45252039.

Fgf and Esrrb integrate epigenetic and transcriptional networks that regulate self-renewal of trophoblast stem cells

Paulina A. Latos, Angela Goncalves, David Oxley, Hisham Mohammed, Ernest Turro, Myriam Hemberger

Nat Commun. 2015; 6: 7776. Published online 2015 Jul 24. doi: 10.1038/ncomms8776

PMCID:: PMC4525203

Abstract Article PDF–1.9M

Select item 435840310.

Control of a neuronal morphology program by an RNA-binding zinc finger protein, Unkempt

Jernej Murn, Kathi Zarnack, Yawei J. Yang, Omer Durak, Elisabeth A. Murphy, Sihem Cheloufi, Dilenny M. Gonzalez, Marianna Teplova, Tomaž Curk, Johannes Zuber, Dinshaw J. Patel, Jernej Ule, Nicholas M. Luscombe, Li-Huei Tsai, Christopher A. Walsh, Yang Shi

Genes Dev. 2015 Mar 1; 29(5): 501–512. doi: 10.1101/gad.258483.115

PMCID:: PMC4358403

Abstract Article PDF–1.4M

Select item 407349411.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 396156312.

The MutSβ complex is a modulator of p53-driven tumorigenesis through its functions in both DNA double strand break repair and mismatch repair

Johanna M. M. van Oers, Yasmin Edwards, Richard Chahwan, Weijia Zhang, Cameron Smith, Joaquín Pechuan, Sonja Schaetzlein, Bo Jin, Yuxun Wang, Aviv Bergman, Matthew D. Scharff, Winfried Edelmann

Oncogene. Author manuscript; available in PMC 2014 Jul 25.

Published in final edited form as: Oncogene. 2014 Jul 24; 33(30): 3939–3946. Published online 2013 Sep 9. doi: 10.1038/onc.2013.365

PMCID:: PMC3961563

Abstract Article PDF–1.1M

Select item 376929213.

Functional Analysis in Mouse Embryonic Stem Cells Reveals Wild-Type Activity for Three Msh6 Variants Found in Suspected Lynch Syndrome Patients

Eva A. L. Wielders, Hellen Houlleberghs, Gözde Isik, Hein te Riele

PLoS One. 2013; 8(9): e74766. Published online 2013 Sep 10. doi: 10.1371/journal.pone.0074766

PMCID:: PMC3769292

Abstract Article PDF–1.5M

Select item 374619814.

A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal

Alessia Gagliardi, Nicholas P Mullin, Zi Ying Tan, Douglas Colby, Anastasia I Kousa, Florian Halbritter, Jason T Weiss, Anastasia Felker, Karel Bezstarosti, Rebecca Favaro, Jeroen Demmers, Silvia K Nicolis, Simon R Tomlinson, Raymond A Poot, Ian Chambers

EMBO J. 2013 Aug 14; 32(16): 2231–2247. Published online 2013 Jul 26. doi: 10.1038/emboj.2013.161

PMCID:: PMC3746198

Abstract Article PDF–2.9M

Select item 365306915.

Ribonucleotides Misincorporated into DNA Act as Strand-Discrimination Signals in Eukaryotic Mismatch Repair

Medini Manohar Ghodgaonkar, Federico Lazzaro, Maite Olivera-Pimentel, Mariela Artola-Borán, Petr Cejka, Martin A. Reijns, Andrew P. Jackson, Paolo Plevani, Marco Muzi-Falconi, Josef Jiricny

Mol Cell. 2013 May 9; 50(3): 323–332. doi: 10.1016/j.molcel.2013.03.019

PMCID:: PMC3653069

Abstract Article

Select item 355778816.

Alkylation induced colon tumorigenesis in mice deficient in the Mgmt and Msh6 proteins

James M. Bugni, Lisiane B. Meira, Leona D. Samson

Oncogene. Author manuscript; available in PMC 2013 Jan 29.

Published in final edited form as: Oncogene. 2009 Feb 5; 28(5): 734–741. Published online 2008 Nov 24. doi: 10.1038/onc.2008.426

PMCID:: PMC3557788

Abstract Article PDF–500K

Select item 355664517.

The mismatch repair system protects against intergenerational GAA repeat instability in a Friedreich ataxia mouse model

Vahid Ezzatizadeh, Ricardo Mouro Pinto, Chiranjeevi Sandi, Madhavi Sandi, Sahar Al-Mahdawi, Hein te Riele, Mark A. Pook

Neurobiol Dis. Author manuscript; available in PMC 2013 Apr 1.

Published in final edited form as: Neurobiol Dis. 2012 Apr; 46(1): 165–171. Published online 2012 Jan 20. doi: 10.1016/j.nbd.2012.01.002

PMCID:: PMC3556645

Abstract Article PDF–1.8M

Select item 346949018.

Pms2 Suppresses Large Expansions of the (GAA·TTC)_n Sequence in Neuronal Tissues

Rebecka L. Bourn, Irene De Biase, Ricardo Mouro Pinto, Chiranjeevi Sandi, Sahar Al-Mahdawi, Mark A. Pook, Sanjay I. Bidichandani

PLoS One. 2012; 7(10): e47085. Published online 2012 Oct 11. doi: 10.1371/journal.pone.0047085

PMCID:: PMC3469490

Abstract Article PDF–1.2M

Select item 344801219.

Transcription factor Foxp3 and its protein partners form a complex regulatory network

Dipayan Rudra, Paul deRoos, Ashutosh Chaudhry, Rachel Niec, Aaron Arvey, Robert M. Samstein, Christina Leslie, Scott A. Shaffer, David R. Goodlett, Alexander Y. Rudensky

Nat Immunol. Author manuscript; available in PMC 2013 Apr 1.

Published in final edited form as: Nat Immunol. 2012 Oct; 13(10): 1010–1019. Published online 2012 Aug 26. doi: 10.1038/ni.2402

PMCID:: PMC3448012

Abstract Article PDF–2.6M

Select item 325246520.

Oct4 links multiple epigenetic pathways to the pluripotency network

Junjun Ding, Huilei Xu, Francesco Faiola, Avi Ma'ayan, Jianlong Wang

Cell Res. 2012 Jan; 22(1): 155–167. Published online 2011 Nov 15. doi: 10.1038/cr.2011.179

PMCID:: PMC3252465

Abstract Article PDF–2.7M

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