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Items: 1 to 20 of 38

1.
E74-like factor 1 contributes to nerve trauma-induced nociceptive hypersensitivity via transcriptionally activating matrix metalloprotein-9 in dorsal root ganglion neurons
Luyao Zhang, Xiang Li, Xiaozhou Feng, Tolga Berkman, Ruining Ma, Shibin Du, Shaogen Wu, Congcong Huang, Akwasi Amponsah, Alex Bekker, Yuan-Xiang Tao
Pain. Author manuscript; available in PMC 2024 Jan 1.
Published in final edited form as: Pain. 2023 Jan 1; 164(1): 119–131. Published online 2022 May 4. doi: 10.1097/j.pain.0000000000002673
PMCID:
PMC9633582
ArticlePDF–1.9M
2.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
3.
Articular cartilage endurance and resistance to osteoarthritic changes require transcription factor Erg
Yoichi Ohta, Takahiro Okabe, Colleen Larmour, Agnese Di Rocco, Marijke Maijenburg, Amanda Phillips, Nancy A. Speck, Shigeyuki Wakitani, Takashi Nakamura, Yoshihiko Yamada, Motomi Enomoto-Iwamoto, Maurizio Pacifici, Masahiro Iwamoto
Arthritis Rheumatol. Author manuscript; available in PMC 2017 Aug 23.
Published in final edited form as: Arthritis Rheumatol. 2015 Oct; 67(10): 2679–2690. doi: 10.1002/art.39243
PMCID:
PMC5568074
AbstractArticlePDF–2.6M
4.
Increased Resistance to Intradermal Francisella tularensis LVS Infection by Inactivation of the Sts Phosphatases
Kaustubh Parashar, Erik Kopping, David Frank, Vinaya Sampath, David G. Thanassi, Nick Carpino
Infect Immun. 2017 Sep; 85(9): e00406-17. Prepublished online 2017 Jun 19. Published online 2017 Aug 18. doi: 10.1128/IAI.00406-17
PMCID:
PMC5563576
AbstractArticlePDF–1.3M
5.
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones
Neuron. Author manuscript; available in PMC 2015 Jul 16.
Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033
PMCID:
PMC4319559
AbstractArticlePDF–3.0M
6.
Fli1 Acts Downstream of Etv2 to Govern Cell Survival and Vascular Homeostasis via Positive Autoregulation
Md J. Abedin, Annie Nguyen, Nan Jiang, Cameron E. Perry, John M. Shelton, Dennis K. Watson, Anwarul Ferdous
Circ Res. Author manuscript; available in PMC 2015 May 23.
Published in final edited form as: Circ Res. 2014 May 23; 114(11): 1690–1699. Published online 2014 Apr 11. doi: 10.1161/CIRCRESAHA.1134303145
PMCID:
PMC4080722
AbstractArticlePDF–1.7M
7.
Enhanced Response of T Cells from Murine Gammaherpesvirus 68-Infected Mice Lacking the Suppressor of T Cell Receptor Signaling Molecules Sts-1 and Sts-2
Brandon Cieniewicz, Nicholas Carpino, Laurie T. Krug
PLoS One. 2014; 9(2): e90196. Published online 2014 Feb 28. doi: 10.1371/journal.pone.0090196
PMCID:
PMC3938662
AbstractArticlePDF–1.6M
8.
Transcription factor Foxp3 and its protein partners form a complex regulatory network
Dipayan Rudra, Paul deRoos, Ashutosh Chaudhry, Rachel Niec, Aaron Arvey, Robert M. Samstein, Christina Leslie, Scott A. Shaffer, David R. Goodlett, Alexander Y. Rudensky
Nat Immunol. Author manuscript; available in PMC 2013 Apr 1.
Published in final edited form as: Nat Immunol. 2012 Oct; 13(10): 1010–1019. Published online 2012 Aug 26. doi: 10.1038/ni.2402
PMCID:
PMC3448012
AbstractArticlePDF–2.6M
9.
A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract
Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith
Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130
PMCID:
PMC3439845
AbstractArticlePDF–1.4M
10.
Opposing Functions of the ETS Factor Family Define Shh Spatial Expression in Limb Buds and Underlie Polydactyly
Laura A. Lettice, Iain Williamson, John H. Wiltshire, Silvia Peluso, Paul S. Devenney, Alison E. Hill, Abdelkader Essafi, James Hagman, Richard Mort, Graeme Grimes, Carlo L. DeAngelis, Robert E. Hill
Dev Cell. 2012 Feb 14; 22(2): 459–467. doi: 10.1016/j.devcel.2011.12.010
PMCID:
PMC3314984
AbstractArticle
11.
ETS-Dependent Regulation of a Distal Gata4 Cardiac Enhancer
William Schachterle, Anabel Rojas, Shan-Mei Xu, Brian L. Black
Dev Biol. Author manuscript; available in PMC 2013 Jan 15.
Published in final edited form as: Dev Biol. 2012 Jan 15; 361(2): 439–449. Published online 2011 Oct 26. doi: 10.1016/j.ydbio.2011.10.023
PMCID:
PMC3246565
AbstractArticlePDF–4.4M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
14.
Sts-2 Is a Phosphatase That Negatively Regulates Zeta-associated Protein (ZAP)-70 and T Cell Receptor Signaling Pathways
Boris San Luis, Ben Sondgeroth, Nicolas Nassar, Nick Carpino
J Biol Chem. 2011 May 6; 286(18): 15943–15954. Published online 2011 Mar 10. doi: 10.1074/jbc.M110.177634
PMCID:
PMC3091203
AbstractArticlePDF–1.6M
15.
Differential requirements for the Ets transcription factor Elf-1 in the development of NKT cells and NK cells
Hak-Jong Choi, Yanbiao Geng, Hoonsik Cho, Sha Li, Pramod Kumar Giri, Kyrie Felio, Chyung-Ru Wang
Blood. 2011 Feb 10; 117(6): 1880–1887. Prepublished online 2010 Dec 10. doi: 10.1182/blood-2010-09-309468
PMCID:
PMC3056637
AbstractArticle
16.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
17.
Transcriptional regulation of Elf-1: locus-wide analysis reveals four distinct promoters, a tissue-specific enhancer, control by PU.1 and the importance of Elf-1 downregulation for erythroid maturation
Fernando J. Calero-Nieto, Andrew D. Wood, Nicola K. Wilson, Sarah Kinston, Josette-Renée Landry, Berthold Göttgens
Nucleic Acids Res. 2010 Oct; 38(19): 6363–6374. Published online 2010 Jun 4. doi: 10.1093/nar/gkq490
PMCID:
PMC2965225
AbstractArticlePDF–1.6M
18.
The 1.35 Å resolution structure of the phosphatase domain of the suppressor of T-cell receptor signaling protein in complex with sulfate
Jean Jakoncic, Benjamin Sondgeroth, Nick Carpino, Nicolas Nassar
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1; 66(Pt 6): 643–647. Published online 2010 May 25. doi: 10.1107/S1744309110014259
PMCID:
PMC2882760
AbstractArticlePDF–755K
19.
Uncovering early response of gene regulatory networks in ES cells by systematic induction of transcription factors
Akira Nishiyama, Li Xin, Alexei A. Sharov, Marshall Thomas, Gregory Mowrer, Emily Meyers, Yulan Piao, Samir Mehta, Sarah Yee, Yuhki Nakatake, Carole Stagg, Lioudmila Sharova, Lina S. Correa-Cerro, Uwem Bassey, Hien Hoang, Eugene Kim, Richard Tapnio, Yong Qian, Dawood Dudekula, Michal Zalzman, Manxiang Li, Geppino Falco, Hsih-Te Yang, Sung-Lim Lee, Manuela Monti, Ilaria Stanghellini, Md. Nurul Islam, Ramaiah Nagaraja, Ilya Goldberg, Weidong Wang, Dan L. Longo, David Schlessinger, Minoru S. H. Ko
Cell Stem Cell. Author manuscript; available in PMC 2010 Oct 2.
Published in final edited form as: Cell Stem Cell. 2009 Oct 2; 5(4): 420–433. doi: 10.1016/j.stem.2009.07.012
PMCID:
PMC2770715
AbstractArticlePDF–2.6M
20.
The Sts proteins target tyrosine phosphorylated, ubiquitinated proteins within TCR signaling pathways
Nick Carpino, Yunting Chen, Nicolas Nassar, Hye-Won Oh
Mol Immunol. Author manuscript; available in PMC 2010 Oct 1.
Published in final edited form as: Mol Immunol. 2009 Oct; 46(16): 3224–3231. Published online 2009 Sep 5. doi: 10.1016/j.molimm.2009.08.015
PMCID:
PMC2757469
AbstractArticlePDF–684K

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