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Items: 1 to 20 of 27

1.
The E3 ubiquitin ligase TRIM9 regulates synaptic function and actin dynamics in response to netrin-1
Laura E. McCormick, Elliot B. Evans, Natalie K. Barker, Laura E. Herring, Graham H. Diering, Stephanie L. Gupton
Mol Biol Cell. 2024 May 1; 35(5): ar67. Published online 2024 Apr 11. doi: 10.1091/mbc.E23-12-0476
PMCID:
PMC11151106
AbstractArticlePDF–8.9M
2.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
3.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
4.
The TRIM9/TRIM67 neuronal interactome reveals novel activators of morphogenesis
Shalini Menon, Dennis Goldfarb, Chris T. Ho, Erica W. Cloer, Nicholas P. Boyer, Christopher Hardie, Andrew J. Bock, Emma C. Johnson, Joel Anil, M. Ben Major, Stephanie L. Gupton
Mol Biol Cell. 2021 Feb 15; 32(4): 314–330. doi: 10.1091/mbc.E20-10-0622
PMCID:
PMC8098814
AbstractArticlePDF–7.7M
5.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
6.
A pair of E3 ubiquitin ligases compete to regulate filopodial dynamics and axon guidance
Nicholas P. Boyer, Laura E. McCormick, Shalini Menon, Fabio L. Urbina, Stephanie L. Gupton
J Cell Biol. 2020 Jan 6; 219(1): e201902088. Published online 2019 Dec 9. doi: 10.1083/jcb.201902088
PMCID:
PMC7039193
AbstractArticlePDF–6.7M
7.
Overlapping Activities of Two Neuronal Splicing Factors Switch the GABA Effect from Excitatory to Inhibitory by Regulating REST
Yoko Nakano, Susan Wiechert, Botond Bánfi
Cell Rep. Author manuscript; available in PMC 2019 Jun 9.
Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 860–871.e8. doi: 10.1016/j.celrep.2019.03.072
PMCID:
PMC6556397
AbstractArticlePDF–2.3M
8.
TRIM9-Mediated Resolution of Neuroinflammation Confers Neuroprotectionupon Ischemic Stroke in Mice
Jianxiong Zeng, Yaoming Wang, Zhifei Luo, Lin-Chun Chang, Ji Seung Yoo, Huan Yan, Younho Choi, Xiaochun Xie, Benjamin E. Deverman, Viviana Gradinaru, Stephanie L. Gupton, Berislav V. Zlokovic, Zhen Zhao, Jae U. Jung
Cell Rep. Author manuscript; available in PMC 2019 Apr 26.
Published in final edited form as: Cell Rep. 2019 Apr 9; 27(2): 549–560.e6. doi: 10.1016/j.celrep.2018.12.055
Correction in:
Cell Rep. 2023 Aug 29; 42(8): 113050.
PMCID:
PMC6485958
AbstractArticlePDF–2.3M
9.
The Trim family of genes and the retina: Expression and functional characterization
Rebecca Chowdhury, Lauren A. Laboissonniere, Andrea K. Wester, Madison Muller, Jeffrey M. Trimarchi
PLoS One. 2018; 13(9): e0202867. Published online 2018 Sep 12. doi: 10.1371/journal.pone.0202867
PMCID:
PMC6135365
AbstractArticlePDF–15M
10.
Mammalian TRIM67 Functions in Brain Development and Behavior
Nicholas P. Boyer, Caroline Monkiewicz, Shalini Menon, Sheryl S. Moy, Stephanie L. Gupton
eNeuro. 2018 May-Jun; 5(3): ENEURO.0186-18.2018. Prepublished online 2018 May 29. Published online 2018 Jun 14. doi: 10.1523/ENEURO.0186-18.2018
Correction in:
eNeuro. 2019 Jul-Aug; 6(4): ENEURO.0281-19.2019.
PMCID:
PMC6002264
AbstractArticlePDF–6.7M
11.
TRIM9-dependent ubiquitination of DCC constrains kinase signaling, exocytosis, and axon branching
Melissa Plooster, Shalini Menon, Cortney C. Winkle, Fabio L. Urbina, Caroline Monkiewicz, Kristen D. Phend, Richard J. Weinberg, Stephanie L. Gupton
Mol Biol Cell. 2017 Sep 1; 28(18): 2374–2385. doi: 10.1091/mbc.E16-08-0594
PMCID:
PMC5576901
AbstractArticlePDF–4.7M
12.
Trim9 Deletion Alters the Morphogenesis of Developing and Adult-Born Hippocampal Neurons and Impairs Spatial Learning and Memory
Cortney C. Winkle, Reid H. J. Olsen, Hyojin Kim, Sheryl S. Moy, Juan Song, Stephanie L. Gupton
J Neurosci. 2016 May 4; 36(18): 4940–4958. doi: 10.1523/JNEUROSCI.3876-15.2016
PMCID:
PMC4854964
AbstractArticlePDF–9.7M
13.
The E3 ubiquitin ligase TRIM9 is a filopodia off switch required for netrin dependent axon guidance
Shalini Menon, Nicholas Patrick Boyer, Cortney Chelise Winkle, Leslie Marie McClain, Christopher Carey Hanlin, Dharmendra Pandey, Simon Rothenfußer, Anne Marion Taylor, Stephanie Lynn Gupton
Dev Cell. Author manuscript; available in PMC 2016 Dec 21.
Published in final edited form as: Dev Cell. 2015 Dec 21; 35(6): 698–712. doi: 10.1016/j.devcel.2015.11.022
PMCID:
PMC4707677
AbstractArticlePDF–1.1M
14.
A novel Netrin-1–sensitive mechanism promotes local SNARE-mediated exocytosis during axon branching
Cortney C. Winkle, Leslie M. McClain, Juli G. Valtschanoff, Charles S. Park, Christopher Maglione, Stephanie L. Gupton
J Cell Biol. 2014 Apr 28; 205(2): 217–232. doi: 10.1083/jcb.201311003
PMCID:
PMC4003241
AbstractArticlePDF–4.9M
15.
A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract
Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith
Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130
PMCID:
PMC3439845
AbstractArticlePDF–1.4M
16.
TRIM67 Protein Negatively Regulates Ras Activity through Degradation of 80K-H and Induces Neuritogenesis
Hiroaki Yaguchi, Fumihiko Okumura, Hidehisa Takahashi, Takahiro Kano, Hiroyuki Kameda, Motokazu Uchigashima, Shinya Tanaka, Masahiko Watanabe, Hidenao Sasaki, Shigetsugu Hatakeyama
J Biol Chem. 2012 Apr 6; 287(15): 12050–12059. Published online 2012 Feb 15. doi: 10.1074/jbc.M111.307678
PMCID:
PMC3320951
AbstractArticlePDF–1.9M
17.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
18.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
19.
TRIM9, a novel brain-specific E3 ubiquitin ligase, is repressed in the brain of Parkinson’s disease and dementia with Lewy bodies
Kunikazu Tanji, Tetsu Kamitani, Fumiaki Mori, Akiyoshi Kakita, Hitoshi Takahashi, Koichi Wakabayashi
Neurobiol Dis. Author manuscript; available in PMC 2011 May 1.
Published in final edited form as: Neurobiol Dis. 2010 May; 38(2): 210–218. Published online 2010 Jan 18. doi: 10.1016/j.nbd.2010.01.007
PMCID:
PMC2942959
AbstractArticlePDF–1.8M
20.
Regulatory Pathway Analysis by High-Throughput In Situ Hybridization
Axel Visel, James Carson, Judit Oldekamp, Marei Warnecke, Vladimira Jakubcakova, Xunlei Zhou, Chad A Shaw, Gonzalo Alvarez-Bolado, Gregor Eichele
PLoS Genet. 2007 Oct; 3(10): e178. Published online 2007 Oct 19. doi: 10.1371/journal.pgen.0030178
PMCID:
PMC2041993
AbstractArticlePDF–2.4M

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