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Items: 1 to 20 of 97

1.
Cohesin composition and dosage independently affect early development in zebrafish
Anastasia A. Labudina, Michael Meier, Gregory Gimenez, David Tatarakis, Sarada Ketharnathan, Bridget Mackie, Thomas F. Schilling, Jisha Antony, Julia A. Horsfield
Development. 2024 Aug 1; 151(15): dev202593. Published online 2024 Aug 1. doi: 10.1242/dev.202593
PMCID:
PMC11317101
Article
2.
Deficiency of mastl, a mitotic regulator, results in cell detachment from developing tissues of zebrafish embryos
Hideko Utsumi, Taijiro Yabe, Sumito Koshida, Akira Yamashita, Shinji Takada
Front Cell Dev Biol. 2024; 12: 1375655. Published online 2024 Mar 11. doi: 10.3389/fcell.2024.1375655
PMCID:
PMC10964716
ArticlePDF–2.9M
3.
Zebrafish as a model to investigate a biallelic gain-of-function variant in MSGN1, associated with a novel skeletal dysplasia syndrome
Asuman Koparir, Caroline Lekszas, Kemal Keseroglu, Thalia Rose, Lena Rappl, Aboulfazl Rad, Reza Maroofian, Nakul Narendran, Atefeh Hasanzadeh, Ehsan Ghayoor Karimiani, Felix Boschann, Uwe Kornak, Eva Klopocki, Ertuğrul M. Özbudak, Barbara Vona, Thomas Haaf, Daniel Liedtke
Hum Genomics. 2024; 18: 23. Published online 2024 Mar 6. doi: 10.1186/s40246-024-00593-w
PMCID:
PMC10916241
ArticlePDF–1.9M
4.
Embryo-scale reverse genetics at single-cell resolution
Lauren M. Saunders, Sanjay R. Srivatsan, Madeleine Duran, Michael W. Dorrity, Brent Ewing, Tor H. Linbo, Jay Shendure, David W. Raible, Cecilia B. Moens, David Kimelman, Cole Trapnell
Nature. 2023; 623(7988): 782–791. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06720-2
PMCID:
PMC10665197
ArticlePDF–50M
5.
Bicyclic Caged Morpholino Oligonucleotides for Optical Gene Silencing
Dr. Sankha Pattanayak, Dr. Bhagyesh R. Sarode, Prof. Dr. Alexander Deiters, Prof. Dr. James K. Chen
Chembiochem. Author manuscript; available in PMC 2023 Nov 4.
Published in final edited form as: Chembiochem. 2022 Nov 4; 23(21): e202200374. Published online 2022 Oct 6. doi: 10.1002/cbic.202200374
PMCID:
PMC9637763
ArticlePDF–1.4M
6.
Eomes function is conserved between zebrafish and mouse and controls left-right organiser progenitor gene expression via interlocking feedforward loops
Conor D. Talbot, Mark D. Walsh, Stephen J. Cutty, Randa Elsayed, Eirini Vlachaki, Ashley E. E. Bruce, Fiona C. Wardle, Andrew C. Nelson
Front Cell Dev Biol. 2022; 10: 982477. Published online 2022 Aug 25. doi: 10.3389/fcell.2022.982477
PMCID:
PMC9483813
ArticlePDF–2.5M
7.
MIC-Drop: A platform for large-scale in vivo CRISPR screens
Saba Parvez, Chelsea Herdman, Manu Beerens, Korak Chakraborti, Zachary P. Harmer, Jing-Ruey J. Yeh, Calum A. MacRae, H. Joseph Yost, Randall T. Peterson
Science. Author manuscript; available in PMC 2022 May 9.
Published in final edited form as: Science. 2021 Sep 3; 373(6559): 1146–1151. Published online 2021 Aug 19. doi: 10.1126/science.abi8870
PMCID:
PMC9083377
ArticlePDF–2.4M
8.
Small Molecule Control of Morpholino Antisense Oligonucleotide Function through Staudinger Reduction
Kristie Darrah, Joshua Wesalo, Bradley Lukasak, Michael Tsang, James K. Chen, Alexander Deiters
J Am Chem Soc. Author manuscript; available in PMC 2022 Nov 10.
Published in final edited form as: J Am Chem Soc. 2021 Nov 10; 143(44): 18665–18671. Published online 2021 Oct 27. doi: 10.1021/jacs.1c08723
PMCID:
PMC9014490
ArticlePDF–1.5M
9.
Generation of Naïve Blastoderm Explants from Zebrafish Embryos
Alyssa Alaniz Emig, Margot L. K. Williams
J Vis Exp. Author manuscript; available in PMC 2022 Mar 3.
Published in final edited form as: J Vis Exp. 2021 Jul 30; (173): 10.3791/62797. Published online 2021 Jul 30. doi: 10.3791/62797
PMCID:
PMC8892589
ArticlePDF–773K
10.
Somite morphogenesis is required for axial blood vessel formation during zebrafish embryogenesis
Eric Paulissen, Nicholas J Palmisano, Joshua S Waxman, Benjamin L Martin
eLife. 2022; 11: e74821. Published online 2022 Feb 9. doi: 10.7554/eLife.74821
PMCID:
PMC8863375
ArticlePDF–21M
11.
Smad4 controls signaling robustness and morphogenesis by differentially contributing to the Nodal and BMP pathways
Luca Guglielmi, Claire Heliot, Sunil Kumar, Yuriy Alexandrov, Ilaria Gori, Foteini Papaleonidopoulou, Christopher Barrington, Philip East, Andrew D. Economou, Paul M. W. French, James McGinty, Caroline S. Hill
Nat Commun. 2021; 12: 6374. Published online 2021 Nov 4. doi: 10.1038/s41467-021-26486-3
PMCID:
PMC8569018
ArticlePDF–15M
12.
A simple and effective F0 knockout method for rapid screening of behaviour and other complex phenotypes
François Kroll, Gareth T Powell, Marcus Ghosh, Gaia Gestri, Paride Antinucci, Timothy J Hearn, Hande Tunbak, Sumi Lim, Harvey W Dennis, Joseph M Fernandez, David Whitmore, Elena Dreosti, Stephen W Wilson, Ellen J Hoffman, Jason Rihel
eLife. 2021; 10: e59683. Published online 2021 Jan 8. doi: 10.7554/eLife.59683
PMCID:
PMC7793621
ArticlePDF–2.8M
13.
A deep learning approach for staging embryonic tissue isolates with small data
Adam Joseph Ronald Pond, Seongwon Hwang, Berta Verd, Benjamin Steventon
PLoS One. 2021; 16(1): e0244151. Published online 2021 Jan 8. doi: 10.1371/journal.pone.0244151
PMCID:
PMC7793293
ArticlePDF–1.1M
14.
Hox13 genes are required for mesoderm formation and axis elongation during early zebrafish development
Zhi Ye, David Kimelman
Development. 2020 Nov 15; 147(22): dev185298. Published online 2020 Nov 27. doi: 10.1242/dev.185298
PMCID:
PMC7710019
Article
15.
Sox2 and Canonical Wnt Signaling Interact to Activate a Developmental Checkpoint Coordinating Morphogenesis with Mesoderm Fate Acquisition
Brian A. Kinney, Arwa Al Anber, Richard H. Row, Yu-Jung Tseng, Maxwell D. Weidmann, Holger Knaut, Benjamin L. Martin
Cell Rep. Author manuscript; available in PMC 2020 Nov 10.
Published in final edited form as: Cell Rep. 2020 Oct 27; 33(4): 108311. doi: 10.1016/j.celrep.2020.108311
PMCID:
PMC7653682
ArticlePDF–2.0M
16.
Nodal signaling establishes a competency window for stochastic cell fate switching
Andrew D. Economou, Luca Guglielmi, Philip East, Caroline S. Hill
Dev Cell. Author manuscript; available in PMC 2023 Oct 26.
Published in final edited form as: Dev Cell. 2022 Dec 5; 57(23): 2604–2622.e5. doi: 10.1016/j.devcel.2022.11.008
PMCID:
PMC7615190
ArticlePDF–17M
17.
Axis Specification in Zebrafish Is Robust to Cell Mixing and Reveals a Regulation of Pattern Formation by Morphogenesis
Timothy Fulton, Vikas Trivedi, Andrea Attardi, Kerim Anlas, Chaitanya Dingare, Alfonso Martinez Arias, Benjamin Steventon
Curr Biol. 2020 Aug 3; 30(15): 2984–2994.e3. doi: 10.1016/j.cub.2020.05.048
Correction in:
Curr Biol. 2020 Aug 3; 30(15): 3063–3064.
PMCID:
PMC7416079
Article
18.
Nodal and planar cell polarity signaling cooperate to regulate zebrafish convergence and extension gastrulation movements
Margot LK Williams, Lilianna Solnica-Krezel
eLife. 2020; 9: e54445. Published online 2020 Apr 22. doi: 10.7554/eLife.54445
PMCID:
PMC7250581
ArticlePDF–9.7M
19.
Fgf-driven Tbx protein activities directly induce myf5 and myod to initiate zebrafish myogenesis
Daniel P. S. Osborn, Kuoyu Li, Stephen J. Cutty, Andrew C. Nelson, Fiona C. Wardle, Yaniv Hinits, Simon M. Hughes
Development. 2020 Apr 15; 147(8): dev184689. Published online 2020 Apr 28. doi: 10.1242/dev.184689
PMCID:
PMC7197714
Article
20.
Chromatin accessibility established by Pou5f3, Sox19b and Nanog primes genes for activity during zebrafish genome activation
Máté Pálfy, Gunnar Schulze, Eivind Valen, Nadine L. Vastenhouw
PLoS Genet. 2020 Jan; 16(1): e1008546. Published online 2020 Jan 15. doi: 10.1371/journal.pgen.1008546
PMCID:
PMC6986763
ArticlePDF–2.7M

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