PMC Links for GEO Profiles (Select 123207839) - PMC

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Items: 12

Select item 66901921.

Analyses of mRNA structure dynamics identify embryonic gene regulatory programs

Jean-Denis Beaudoin, Eva Maria Novoa, Charles E. Vejnar, Valeria Yartseva, Carter M. Takacs, Manolis Kellis, Antonio J. Giraldez

Nat Struct Mol Biol. Author manuscript; available in PMC 2019 Aug 12.

Published in final edited form as: Nat Struct Mol Biol. 2018 Aug; 25(8): 677–686. Published online 2018 Jul 30. doi: 10.1038/s41594-018-0091-z

PMCID:: PMC6690192

Abstract Article PDF–2.7M

Select item 66093952.

An evolutionary approach to recover genes predominantly expressed in the testes of the zebrafish, chicken and mouse

Sophie Fouchécourt, Floriane Picolo, Sébastien Elis, Charlotte Lécureuil, Aurore Thélie, Marina Govoroun, Mégane Brégeon, Pascal Papillier, Jean-Jacques Lareyre, Philippe Monget

BMC Evol Biol. 2019; 19: 137. Published online 2019 Jul 3. doi: 10.1186/s12862-019-1462-8

PMCID:: PMC6609395

Abstract Article PDF–1.9M

Select item 62903733.

DDX3 Participates in Translational Control of Inflammation Induced by Infections and Injuries

Yu-Chang Ku, Min-Hua Lai, Chen-Chia Lo, Yi-Chuan Cheng, Jian-Tai Qiu, Woan-Yuh Tarn, Ming-Chih Lai

Mol Cell Biol. 2019 Jan 1; 39(1): e00285-18. Prepublished online 2018 Oct 29. Published online 2018 Dec 11. doi: 10.1128/MCB.00285-18

PMCID:: PMC6290373

Abstract Article PDF–3.8M

Select item 60051584.

Identification of DEAD-Box RNA Helicase DDX41 as a Trafficking Protein That Involves in Multiple Innate Immune Signaling Pathways in a Zebrafish Model

Jun-xia Ma, Jiang-yuan Li, Dong-dong Fan, Wei Feng, Ai-fu Lin, Li-xin Xiang, Jian-zhong Shao

Front Immunol. 2018; 9: 1327. Published online 2018 Jun 11. doi: 10.3389/fimmu.2018.01327

PMCID:: PMC6005158

Abstract Article PDF–6.2M

Select item 58316945.

A hypomorphic inherited pathogenic variant in DDX3X causes male intellectual disability with additional neurodevelopmental and neurodegenerative features

Georgios Kellaris, Kamal Khan, Shahid M. Baig, I-Chun Tsai, Francisca Millan Zamora, Paul Ruggieri, Marvin R. Natowicz, Nicholas Katsanis

Hum Genomics. 2018; 12: 11. Published online 2018 Mar 1. doi: 10.1186/s40246-018-0141-y

PMCID:: PMC5831694

Abstract Article PDF–1.0M

Select item 53379746.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 48707327.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341378.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 299698810.

Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation

Rachel Lockridge Mueller, Cheng Huang, Robert K Ho

BMC Genomics. 2010; 11: 492. Published online 2010 Sep 9. doi: 10.1186/1471-2164-11-492

PMCID:: PMC2996988

Abstract Article PDF–1.5M

Select item 52895911.

Hematopoietic gene expression profile in zebrafish kidney marrow

Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen

Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101