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Items: 16

1.
Histone demethylase KDM5D upregulation drives sex differences in colon cancer
Jiexi Li, Zhengdao Lan, Wenting Liao, James W. Horner, Xueping Xu, Jielin Liu, Yohei Yoshihama, Shan Jiang, Hong Seok Shim, Max Slotnik, Kyle A. LaBella, Chang-Jiun Wu, Kenneth Dunner, Jr., Wen-Hao Hsu, Rumi Lee, Isha Khanduri, Christopher Terranova, Kadir Akdemir, Deepavali Chakravarti, Xiaoying Shang, Denise J. Spring, Y. Alan Wang, Ronald A. DePinho
Nature. Author manuscript; available in PMC 2023 Sep 27.
Published in final edited form as: Nature. 2023 Jul; 619(7970): 632–639. Published online 2023 Jun 21. doi: 10.1038/s41586-023-06254-7
PMCID:
PMC10529424
AbstractArticlePDF–6.1M
2.
Identification of Jmjd3 as an Essential Epigenetic Regulator of Hox Gene Temporal Collinear Activation for Body Axial Patterning in Mice
Feng Zhang, Xiong Zhao, Runmin Jiang, Yuying Wang, Xinli Wang, Yu Gu, Longyong Xu, Jing Ye, Charlie Degui Chen, Shuangping Guo, Dawei Zhang, Daqing Zhao
Front Cell Dev Biol. 2021; 9: 642931. Published online 2021 Jul 21. doi: 10.3389/fcell.2021.642931
PMCID:
PMC8333871
AbstractArticlePDF–1.4M
3.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
4.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
5.
CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in mice
Yonggang Lu, Seiya Oura, Takafumi Matsumura, Asami Oji, Nobuyuki Sakurai, Yoshitaka Fujihara, Keisuke Shimada, Haruhiko Miyata, Tomohiro Tobita, Taichi Noda, Julio M Castaneda, Daiji Kiyozumi, Qian Zhang, Tamara Larasati, Samantha A M Young, Mayo Kodani, Caitlin A Huddleston, Matthew J Robertson, Cristian Coarfa, Ayako Isotani, R John Aitken, Masaru Okabe, Martin M Matzuk, Thomas X Garcia, Masahito Ikawa
Biol Reprod. 2019 Aug; 101(2): 501–511. Published online 2019 Jun 14. doi: 10.1093/biolre/ioz103
PMCID:
PMC6735960
AbstractArticlePDF–6.9M
6.
The role of Dby mRNA in early development of male mouse zygotes
Chen-Jiang Yao, Wang-Jie Xu, Xiu-Li Gong, Ying Zhou, Zhi-Qiang Yan, Zi-Jue Zhu, Zhao-Xia Wang, Qiao-Li Li, Xin-Bin Guo, Lian-Yun Wang, Duan Ma, Zhong-Dong Qiao
Asian J Androl. 2010 Jul; 12(4): 567–577. Published online 2010 Jun 14. doi: 10.1038/aja.2010.28
PMCID:
PMC3739365
AbstractArticlePDF–737K
7.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
8.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
9.
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives
Owen J Tamplin, Doris Kinzel, Brian J Cox, Christine E Bell, Janet Rossant, Heiko Lickert
BMC Genomics. 2008; 9: 511. Published online 2008 Oct 30. doi: 10.1186/1471-2164-9-511
PMCID:
PMC2605479
AbstractArticlePDF–1.7M
10.
Characterization of the mid-foregut transcriptome identifies genes regulated during lung bud induction
Guetchyn Millien, Jennifer Beane, Marc Lenburg, Po-Nien Tsao, Jining Lu, Avrum Spira, Maria I. Ramirez.
Gene Expr Patterns. Author manuscript; available in PMC 2008 Jun 26.
Published in final edited form as: Gene Expr Patterns. 2008 Jan; 8(2): 124–139. Published online 2007 Sep 26. doi: 10.1016/j.modgep.2007.09.003
PMCID:
PMC2440337
AbstractArticlePDF–2.4M
11.
Evolutionary Strata on the Mouse X Chromosome Correspond to Strata on the Human X Chromosome
Sara A. Sandstedt, Priscilla K. Tucker
Genome Res. 2004 Feb; 14(2): 267–272. doi: 10.1101/gr.1796204
PMCID:
PMC327101
AbstractArticlePDF–142K
12.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
13.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
14.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
15.
Y chromosome short arm-Sxr recombination in XSxr/Y males causes deletion of Rbm and XY female sex reversal.
S H Laval, P H Glenister, C Rasberry, C E Thornton, S K Mahadevaiah, H J Cooke, P S Burgoyne, B M Cattanach
Proc Natl Acad Sci U S A. 1995 Oct 24; 92(22): 10403–10407. doi: 10.1073/pnas.92.22.10403
PMCID:
PMC40805
SummaryPage BrowsePDF–1.4M
16.
Long-term T cell memory requires the surface expression of self-peptide/major histocompatibility complex molecules
Mary A. Markiewicz, Cristina Girao, Joseph T. Opferman, Jiling Sun, Qinghui Hu, Alexander A. Agulnik, Colin E. Bishop, Craig B. Thompson, Philip G. Ashton-Rickardt
Proc Natl Acad Sci U S A. 1998 Mar 17; 95(6): 3065–3070. doi: 10.1073/pnas.95.6.3065
PMCID:
PMC19695
AbstractArticlePDF–200K

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