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Select item 106264191.

DONSON is required for CMG helicase assembly in the mammalian cell cycle

Cecile Evrin, Vanesa Alvarez, Johanna Ainsworth, Ryo Fujisawa, Constance Alabert, Karim PM Labib

EMBO Rep. 2023 Nov; 24(11): e57677. Published online 2023 Oct 2. doi: 10.15252/embr.202357677

PMCID:: PMC10626419

Abstract Article PDF–1.5M

Select item 105700262.

DONSON facilitates Cdc45 and GINS chromatin association and is essential for DNA replication initiation

Georgia Kingsley, Aggeliki Skagia, Paolo Passaretti, Cyntia Fernandez-Cuesta, Alicja Reynolds-Winczura, Kinga Koscielniak, Agnieszka Gambus

Nucleic Acids Res. 2023 Oct 13; 51(18): 9748–9763. Published online 2023 Aug 28. doi: 10.1093/nar/gkad694

PMCID:: PMC10570026

Abstract Article PDF–2.2M

Select item 104761733.

Novel role of DONSON in CMG helicase assembly during vertebrate DNA replication initiation

Yoshitami Hashimoto, Kota Sadano, Nene Miyata, Haruka Ito, Hirofumi Tanaka

EMBO J. 2023 Sep; 42(17): e114131. Published online 2023 Jul 17. doi: 10.15252/embj.2023114131

PMCID:: PMC10476173

Abstract Article PDF–9.5M

Select item 104607324.

The RNA binding protein MEX3A promotes tumor progression of breast cancer by post-transcriptional regulation of IGFBP4

Wenhu Chen, Liqiang Hu, Xuemei Lu, Xiaofei Wang, Changan Zhao, Chen Guo, Xiaoyan Li, Yuqin Ding, Hongguang Zhao, Dongdong Tong, Lifang Wang, Chen Huang

Breast Cancer Res Treat. 2023; 201(3): 353–366. Published online 2023 Jul 11. doi: 10.1007/s10549-023-07028-5

PMCID:: PMC10460732

Abstract Article PDF–5.6M

Select item 91197365.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 83529646.

Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer

Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger

Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y

PMCID:: PMC8352964

Abstract Article PDF–4.5M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 74148518.

DONSON and FANCM associate with different replisomes distinguished by replication timing and chromatin domain

Jing Zhang, Marina A. Bellani, Ryan C. James, Durga Pokharel, Yongqing Zhang, John J. Reynolds, Gavin S. McNee, Andrew P. Jackson, Grant S. Stewart, Michael M. Seidman

Nat Commun. 2020; 11: 3951. Published online 2020 Aug 7. doi: 10.1038/s41467-020-17449-1

PMCID:: PMC7414851

Abstract Article PDF–5.9M

Select item 71568889.

Replisome genes regulation by antitumor miR‐101‐5p in clear cell renal cell carcinoma

Yasutaka Yamada, Nijiro Nohata, Akifumi Uchida, Mayuko Kato, Takayuki Arai, Shogo Moriya, Keiko Mizuno, Satoko Kojima, Kazuto Yamazaki, Yukio Naya, Tomohiko Ichikawa, Naohiko Seki

Cancer Sci. 2020 Apr; 111(4): 1392–1406. Published online 2020 Feb 22. doi: 10.1111/cas.14327

PMCID:: PMC7156888

Abstract Article PDF–2.5M

Select item 704296810.

Linked-read genome sequencing identifies biallelic pathogenic variants in DONSON as a novel cause of Meier-Gorlin syndrome

Karen M Knapp, Rosie Sullivan, Jennie Murray, Gregory Gimenez, Pamela Arn, Precilla D'Souza, Alper Gezdirici, William G Wilson, Andrew P Jackson, Carlos Ferreira, Louise S Bicknell

J Med Genet. 2020 Mar; 57(3): 195–202. Published online 2019 Nov 29. doi: 10.1136/jmedgenet-2019-106396

PMCID:: PMC7042968

Abstract Article PDF–1.8M

Select item 693624911.

Biallelic and De Novo Variants in DONSON Reveal a Clinical Spectrum of Cell Cycle-opathies with Microcephaly, Dwarfism and Skeletal Abnormalities

Ender Karaca, Jennifer E. Posey, Bret Bostwick, Pengfei Liu, Alper Gezdirici, Gozde Yesil, Zeynep Coban Akdemir, Yavuz Bayram, Frederike Leonie Harms, Peter Meinecke, Malik Alawi, Carlos A. Bacino, V. Reid Sutton, Fanny Kortum, James. R. Lupski

Am J Med Genet A. Author manuscript; available in PMC 2020 Oct 1.

Published in final edited form as: Am J Med Genet A. 2019 Oct; 179(10): 2056–2066. Published online 2019 Aug 13. doi: 10.1002/ajmg.a.61315

PMCID:: PMC6936249

Abstract Article PDF–874K

Select item 687113212.

Differentiation of MISSLA and Fanconi anaemia by computer-aided image analysis and presentation of two novel MISSLA siblings

Magdalena Danyel, Zhuo Cheng, Christine Jung, Felix Boschann, Jean Tori Pantel, Nurulhuda Hajjir, Ricarda Flöttmann, Solveig Schulz, Ilja Demuth, Eamonn Sheridan, Stefan Mundlos, Denise Horn, Martin A. Mensah

Eur J Hum Genet. 2019 Dec; 27(12): 1827–1835. Published online 2019 Jul 18. doi: 10.1038/s41431-019-0469-3

PMCID:: PMC6871132

Abstract Article PDF–1.4M

Select item 642645513.

Mapping the genetic landscape of human cells

Max A. Horlbeck, Albert Xu, Min Wang, Neal K. Bennett, Chong Y. Park, Derek Bogdanoff, Britt Adamson, Eric D. Chow, Martin Kampmann, Tim R. Peterson, Ken Nakamura, Michael A. Fischbach, Jonathan S. Weissman, Luke A. Gilbert

Cell. Author manuscript; available in PMC 2019 Aug 9.

Published in final edited form as: Cell. 2018 Aug 9; 174(4): 953–967.e22. Published online 2018 Jul 19. doi: 10.1016/j.cell.2018.06.010

PMCID:: PMC6426455

Abstract Article PDF–3.6M

Select item 553854914.

Integrated genome and transcriptome sequencing identifies a noncoding mutation in the genome replication factor DONSON as the cause of microcephaly-micromelia syndrome

Gilad D. Evrony, Dwight R. Cordero, Jun Shen, Jennifer N. Partlow, Timothy W. Yu, Rachel E. Rodin, R. Sean Hill, Michael E. Coulter, Anh-Thu N. Lam, Divya Jayaraman, Dianne Gerrelli, Diana G. Diaz, Chloe Santos, Victoria Morrison, Antonella Galli, Ulrich Tschulena, Stefan Wiemann, M. Jocelyne Martel, Betty Spooner, Steven C. Ryu, Princess C. Elhosary, Jillian M. Richardson, Danielle Tierney, Christopher A. Robinson, Rajni Chibbar, Dana Diudea, Rebecca Folkerth, Sheldon Wiebe, A. James Barkovich, Ganeshwaran H. Mochida, James Irvine, Edmond G. Lemire, Patricia Blakley, Christopher A. Walsh

Genome Res. 2017 Aug; 27(8): 1323–1335. doi: 10.1101/gr.219899.116

PMCID:: PMC5538549

Abstract Article PDF–587K

Select item 545090715.

Mutations in DONSON disrupt replication fork stability and cause microcephalic dwarfism

John J Reynolds, Louise S Bicknell, Paula Carroll, Martin R Higgs, Ranad Shaheen, Jennie E Murray, Dimitrios K Papadopoulos, Andrea Leitch, Olga Murina, Žygimantė Tarnauskaitė, Sarah R Wessel, Anastasia Zlatanou, Audrey Vernet, Alex von Kriegsheim, Rachel MA Mottram, Clare V Logan, Hannah Bye, Yun Li, Alexander Brean, Sateesh Maddirevula, Rachel C Challis, Kassiani Skouloudaki, Agaadir Almoisheer, Hessa S Alsaif, Ariella Amar, Natalie J Prescott, Michael B Bober, Angela Duker, Eissa Faqeih, Mohammed Zain Seidahmed, Saeed Al Tala, Abdulrahman Alswaid, Saleem Ahmed, Jumana Yousuf Al-Aama, Janine Altmüller, Mohammed Al Balwi, Angela F Brady, Luciana Chessa, Helen Cox, Rita Fischetto, Raoul Heller, Bertram D Henderson, Emma Hobson, Peter Nürnberg, E Ferda Percin, Angela Peron, Luigina Spaccini, Alan J Quigley, Seema Thakur, Carol A Wise, Grace Yoon, Maha Alnemer, Pavel Tomancak, Gökhan Yigit, A Malcolm R Taylor, Martin AM Reijns, Michael A Simpson, David Cortez, Fowzan S Alkuraya, Christopher G Mathew, Andrew P Jackson, Grant S Stewart

Nat Genet. Author manuscript; available in PMC 2017 Oct 1.

Published in final edited form as: Nat Genet. 2017 Apr; 49(4): 537–549. Published online 2017 Feb 13. doi: 10.1038/ng.3790

PMCID:: PMC5450907

Abstract Article PDF–1.5M

Select item 317805916.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 221282017.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

The ENCODE Project Consortium

Nature. Author manuscript; available in PMC 2008 Jan 24.

Published in final edited form as: Nature. 2007 Jun 14; 447(7146): 799–816. doi: 10.1038/nature05874

PMCID:: PMC2212820

Abstract Article PDF–2.0M

Select item 189133518.

Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions

France Denoeud, Philipp Kapranov, Catherine Ucla, Adam Frankish, Robert Castelo, Jorg Drenkow, Julien Lagarde, Tyler Alioto, Caroline Manzano, Jacqueline Chrast, Sujit Dike, Carine Wyss, Charlotte N. Henrichsen, Nancy Holroyd, Mark C. Dickson, Ruth Taylor, Zahra Hance, Sylvain Foissac, Richard M. Myers, Jane Rogers, Tim Hubbard, Jennifer Harrow, Roderic Guigó, Thomas R. Gingeras, Stylianos E. Antonarakis, Alexandre Reymond

Genome Res. 2007 Jun; 17(6): 746–759. doi: 10.1101/gr.5660607

PMCID:: PMC1891335

Abstract Article PDF–1.2M

Select item 52892819.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 39575220.

An unappreciated role for RNA surveillance

R Tyler Hillman, Richard E Green, Steven E Brenner

Genome Biol. 2004; 5(2): R8. Published online 2004 Feb 2. doi: 10.1186/gb-2004-5-2-r8

PMCID:: PMC395752

Abstract Article PDF–378K

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