PMC Links for GEO Profiles (Select 118457128) - PMC

Hiroto Horiguchi, Haiming Xu, Beatrice Duvert, Felicia Ciuculescu, Qiuming Yao, Amit Sinha, Meaghan McGuinness, Chad Harris, Christian Brendel, Anja Troeger, Roberto Chiarle, David A. Williams

Small GTPases. 2022; 13(1): 267–281. Published online 2022 Jan 5. doi: 10.1080/21541248.2021.2019503

PMCID:: PMC8741284

Abstract Article PDF–4.0M

Select item 84065364.

ZBTB20 is crucial for the specification of a subset of callosal projection neurons and astrocytes in the mammalian neocortex

Jéssica Alves Medeiros de Araújo, Soraia Barão, Isabel Mateos-White, Ana Espinosa, Marcos Romualdo Costa, Cristina Gil-Sanz, Ulrich Müller

Development. 2021 Aug 15; 148(16): dev196642. Published online 2021 Aug 19. doi: 10.1242/dev.196642

PMCID:: PMC8406536

Abstract Article

Select item 79689255.

TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation

Xiaochen Fan, V Pragathi Masamsetti, Jane QJ Sun, Kasper Engholm-Keller, Pierre Osteil, Joshua Studdert, Mark E Graham, Nicolas Fossat, Patrick PL Tam

eLife. 2021; 10: e62873. Published online 2021 Feb 8. doi: 10.7554/eLife.62873

PMCID:: PMC7968925

Abstract Article PDF–4.0M

Select item 63957706.

Regulation of Cathepsin E gene expression by the transcription factor Kaiso in MRL/lpr mice derived CD4+ T cells

Sumie Hiramatsu, Katsue S Watanabe, Sonia Zeggar, Yosuke Asano, Yoshia Miyawaki, Yuriko Yamamura, Eri Katsuyama, Takayuki Katsuyama, Haruki Watanabe, Mariko Takano-Narazaki, Yoshinori Matsumoto, Tomoko Kawabata, Ken-Ei Sada, Jun Wada

Sci Rep. 2019; 9: 3054. Published online 2019 Feb 28. doi: 10.1038/s41598-019-38809-y

PMCID:: PMC6395770

Abstract Article PDF–1.6M

Select item 62194987.

DeSUMOylation switches Kaiso from activator to repressor upon hyperosmotic stress

Svetlana Zhenilo, Igor Deyev, Ekaterina Litvinova, Nadezhda Zhigalova, Daria Kaplun, Alexey Sokolov, Alexander Mazur, Egor Prokhortchouk

Cell Death Differ. 2018 Nov; 25(11): 1938–1951. Published online 2018 Feb 22. doi: 10.1038/s41418-018-0078-7

PMCID:: PMC6219498

Abstract Article PDF–1.6M

Select item 47868708.

Dual regulatory switch through interactions of Tcf7l2/Tcf4 with stage-specific partners propels oligodendroglial maturation

Chuntao Zhao, Yaqi Deng, Lei Liu, Kun Yu, Liguo Zhang, Haibo Wang, Xuelian He, Jincheng Wang, Changqing Lu, Laiman N Wu, Qinjie Weng, Meng Mao, Jianrong Li, Johan H van Es, Mei Xin, Lee Parry, Steven A Goldman, Hans Clevers, Q. Richard Lu

Nat Commun. 2016; 7: 10883. Published online 2016 Mar 9. doi: 10.1038/ncomms10883

PMCID:: PMC4786870

Abstract Article PDF–4.3M

Select item 43813369.

Nuclear p120-catenin regulates the anoikis resistance of mouse lobular breast cancer cells through Kaiso-dependent Wnt11 expression

Robert A. H. van de Ven, Milou Tenhagen, Wouter Meuleman, Jeske J. G. van Riel, Ron C. J. Schackmann, Patrick W. B. Derksen

Dis Model Mech. 2015 Apr; 8(4): 373–384. Published online 2015 Feb 20. doi: 10.1242/dmm.018648

PMCID:: PMC4381336

Abstract Article

Select item 431955910.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 421032011.

KAISO, a critical regulator of p53-mediated transcription of CDKN1A and apoptotic genes

Dong-In Koh, Dohyun Han, Hoon Ryu, Won-Il Choi, Bu-Nam Jeon, Min-Kyeong Kim, Youngsoo Kim, Jin Young Kim, Lee Parry, Alan R. Clarke, Albert B. Reynolds, Man-Wook Hur

Proc Natl Acad Sci U S A. 2014 Oct 21; 111(42): 15078–15083. Published online 2014 Oct 6. doi: 10.1073/pnas.1318780111

Correction in:: Proc Natl Acad Sci U S A. 2021 Jul 6; 118(27): e2109163118.

PMCID:: PMC4210320

Abstract Article PDF–1.2M

Select item 376406412.

The POZ-ZF Transcription Factor Kaiso (ZBTB33) Induces Inflammation and Progenitor Cell Differentiation in the Murine Intestine

Roopali Chaudhary, Christina C. Pierre, Kyster Nanan, Daria Wojtal, Simona Morone, Christopher Pinelli, Geoffrey A. Wood, Sylvie Robine, Juliet M. Daniel

PLoS One. 2013; 8(9): e74160. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0074160

PMCID:: PMC3764064

Abstract Article PDF–7.4M

Select item 344801213.

Transcription factor Foxp3 and its protein partners form a complex regulatory network

Dipayan Rudra, Paul deRoos, Ashutosh Chaudhry, Rachel Niec, Aaron Arvey, Robert M. Samstein, Christina Leslie, Scott A. Shaffer, David R. Goodlett, Alexander Y. Rudensky

Nat Immunol. Author manuscript; available in PMC 2013 Apr 1.

Published in final edited form as: Nat Immunol. 2012 Oct; 13(10): 1010–1019. Published online 2012 Aug 26. doi: 10.1038/ni.2402

PMCID:: PMC3448012

Abstract Article PDF–2.6M

Select item 343984514.

A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract

Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith

Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130

PMCID:: PMC3439845

Abstract Article PDF–1.4M

Select item 342851815.

Identification of Imprinting Regulators at the Meg3 Differentially Methylated Region

Erin N. McMurray, Jennifer V. Schmidt

Genomics. Author manuscript; available in PMC 2013 Sep 1.

Published in final edited form as: Genomics. 2012 Sep; 100(3): 184–194. Published online 2012 Jun 15. doi: 10.1016/j.ygeno.2012.06.001

PMCID:: PMC3428518

Abstract Article PDF–2.5M

Select item 335312216.

Dishevelled Proteins Regulate Cell Adhesion in Mouse Blastocyst and Serve to Monitor Changes in Wnt Signaling

Jie Na, Karin Lykke-Andersen, Maria Elena Torres Padilla, Sigolene Meihac, Magdalena Zernicka-Goetz

Dev Biol. Author manuscript; available in PMC 2012 May 16.

Published in final edited form as: Dev Biol. 2007 Feb 1; 302(1): 40–49. Published online 2006 Aug 22. doi: 10.1016/j.ydbio.2006.08.036

PMCID:: PMC3353122

Abstract Article PDF–2.1M

Select item 317805917.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015118.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 302253419.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 283626720.

An atlas of combinatorial transcriptional regulation in mouse and man

The FANTOM consortium and RIKEN Omics Science Center

Cell. Author manuscript; available in PMC 2011 Mar 5.

Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044

Correction in:: volume 141 on page 369

PMCID:: PMC2836267

Abstract Article PDF–2.2M

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