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Items: 19

1.
The Dispensable Roles of X-Linked Ubl4a and Its Autosomal Counterpart Ubl4b in Spermatogenesis Represent a New Evolutionary Type of X-Derived Retrogenes
Changping Yu, Runjie Diao, Ranjha Khan, Cheng Deng, Hui Ma, Zhijie Chang, Xiaohua Jiang, Qinghua Shi
Front Genet. 2021; 12: 689902. Published online 2021 Jun 25. doi: 10.3389/fgene.2021.689902
PMCID:
PMC8267814
AbstractArticlePDF–10M
2.
Ubl4A is critical for mitochondrial fusion process under nutrient deprivation stress
Huaiyuan Zhang, Yu Zhao, Qi Yao, Zijing Ye, Adriana Mañas, Jialing Xiang
PLoS One. 2020; 15(11): e0242700. Published online 2020 Nov 19. doi: 10.1371/journal.pone.0242700
PMCID:
PMC7676689
AbstractArticlePDF–5.7M
3.
The C-terminus of Ubl4A is critical for pro-death activity and association with the Arp2/3 complex
Qi Yao, Huaiyuan Zhang, Yu Zhao, Zijing Ye, Young Jae Lee, Jialing Xiang
Biochem Biophys Res Commun. Author manuscript; available in PMC 2020 Apr 6.
Published in final edited form as: Biochem Biophys Res Commun. 2018 Sep 18; 503(4): 3192–3197. Published online 2018 Aug 24. doi: 10.1016/j.bbrc.2018.08.123
PMCID:
PMC7132635
AbstractArticlePDF–1.3M
4.
Absence of GdX/UBL4A Protects against Inflammatory Diseases by Regulating NF-кB Signaling in Macrophages and Dendritic Cells
Chunxiao Liu, Yifan Zhou, Mengdi Li, Ying Wang, Liu Yang, Shigao Yang, Yarui Feng, Yinyin Wang, Yangmeng Wang, Fangli Ren, Jun Li, Zhongjun Dong, Y. Eugene Chin, Xinyuan Fu, Li Wu, Zhijie Chang
Theranostics. 2019; 9(5): 1369–1384. Published online 2019 Feb 14. doi: 10.7150/thno.32451
PMCID:
PMC6401509
AbstractArticlePDF–3.2M
5.
Ubl4A is required for insulin-induced Akt plasma membrane translocation through promotion of Arp2/3-dependent actin branching
Yu Zhao, Yuting Lin, Honghong Zhang, Adriana Mañas, Wenwen Tang, Yuzhu Zhang, Dianqing Wu, Anning Lin, Jialing Xiang
Proc Natl Acad Sci U S A. 2015 Aug 4; 112(31): 9644–9649. Published online 2015 Jul 20. doi: 10.1073/pnas.1508647112
PMCID:
PMC4534221
AbstractArticlePDF–1.5M
6.
Structure of a BAG6 (Bcl-2-associated Athanogene 6)-Ubl4a (Ubiquitin-like Protein 4a) Complex Reveals a Novel Binding Interface That Functions in Tail-anchored Protein Biogenesis
Naoyuki Kuwabara, Ryosuke Minami, Naoto Yokota, Hirofumi Matsumoto, Toshiya Senda, Hiroyuki Kawahara, Ryuichi Kato
J Biol Chem. 2015 Apr 10; 290(15): 9387–9398. Published online 2015 Feb 20. doi: 10.1074/jbc.M114.631804
PMCID:
PMC4392246
AbstractArticlePDF–3.0M
7.
Bag6 complex contains a minimal tail-anchor–targeting module and a mock BAG domain
Jee-Young Mock, Justin William Chartron, Ma’ayan Zaslaver, Yue Xu, Yihong Ye, William Melvon Clemons, Jr.
Proc Natl Acad Sci U S A. 2015 Jan 6; 112(1): 106–111. Published online 2014 Dec 22. doi: 10.1073/pnas.1402745112
PMCID:
PMC4291651
AbstractArticlePDF–1.3M
8.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
9.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
10.
Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency
Galih Kunarso, Kee-Yew Wong, Lawrence W Stanton, Leonard Lipovich
BMC Genomics. 2008; 9: 155. Published online 2008 Apr 9. doi: 10.1186/1471-2164-9-155
PMCID:
PMC2375908
AbstractArticlePDF–933K
11.
Ubl4b, an X-derived retrogene, is specifically expressed in post-meiotic germ cells in mammals
Fang Yang, Helen Skaletsky, P. Jeremy Wang
Gene Expr Patterns. Author manuscript; available in PMC 2007 Jan 1.
Published in final edited form as: Gene Expr Patterns. 2007 Jan; 7(1-2): 131–136. Published online 2006 Jun 14. doi: 10.1016/j.modgep.2006.06.002
PMCID:
PMC1647293
AbstractArticlePDF–1.0M
12.
Construction of a detailed molecular map of the mouse X chromosome by microcloning and interspecific crosses.
N Brockdorff, E M Fisher, J S Cavanna, M F Lyon, S D Brown
EMBO J. 1987 Nov; 6(11): 3291–3297. doi: 10.1002/j.1460-2075.1987.tb02648.x
PMCID:
PMC553782
SummaryPage BrowsePDF–1.1M
13.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
14.
Localization of the mdx mutation within the mouse dystrophin gene.
A S Ryder-Cook, P Sicinski, K Thomas, K E Davies, R G Worton, E A Barnard, M G Darlison, P J Barnard
EMBO J. 1988 Oct; 7(10): 3017–3021. doi: 10.1002/j.1460-2075.1988.tb03165.x
PMCID:
PMC454686
SummaryPage BrowsePDF–1.0M
15.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
16.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
17.
Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention
Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands
Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100
Correction in:
Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.
PMCID:
PMC283554
AbstractArticlePDF–481K
18.
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome
Jens Hansen, Thomas Floss, Petra Van Sloun, Ernst-Martin Füchtbauer, Franz Vauti, Hans-Hennig Arnold, Frank Schnütgen, Wolfgang Wurst, Harald von Melchner, Patricia Ruiz
Proc Natl Acad Sci U S A. 2003 Aug 19; 100(17): 9918–9922. Published online 2003 Aug 6. doi: 10.1073/pnas.1633296100
PMCID:
PMC187885
AbstractArticlePDF–287K
19.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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