PMC Links for GEO Profiles (Select 117586851) - PMC

Select item 112370071.

Ribonuclease 4 functions as an intestinal antimicrobial protein to maintain gut microbiota and metabolite homeostasis

Jun Sun, Muxiong Chen, Zhen Hu, Ningqin Xu, Wenguang Wang, Zejun Ping, Jiayi Zhu, Desen Sun, Zhehao Zhu, Hangyu Li, Xiaolong Ge, Liang Luo, Wei Zhou, Rongpan Bai, Zhengping Xu, Jinghao Sheng

Nat Commun. 2024; 15: 5778. Published online 2024 Jul 10. doi: 10.1038/s41467-024-50223-1

PMCID:: PMC11237007

Abstract Article PDF–3.8M

Select item 92337062.

Ribonuclease 4 is associated with aggressiveness and progression of prostate cancer

Nil Vanli, Jinghao Sheng, Shuping Li, Zhengping Xu, Guo-Fu Hu

Commun Biol. 2022; 5: 625. Published online 2022 Jun 25. doi: 10.1038/s42003-022-03597-1

PMCID:: PMC9233706

Abstract Article PDF–8.7M

Select item 81748063.

Expression and function of human ribonuclease 4 in the kidney and urinary tract

Kristin Bender, Laura L. Schwartz, Ariel Cohen, Claudia Mosquera Vasquez, Matthew J. Murtha, Tad Eichler, Jason P. Thomas, Ashley Jackson, John David Spencer

Am J Physiol Renal Physiol. 2021 May 1; 320(5): F972–F983. Published online 2021 Apr 5. doi: 10.1152/ajprenal.00592.2020

PMCID:: PMC8174806

Abstract Article

Select item 81650304.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 58022035.

Identification of differentially expressed genes and regulatory relationships in Huntington's disease by bioinformatics analysis

Xiaoyu Dong, Shuyan Cong

Mol Med Rep. 2018 Mar; 17(3): 4317–4326. Published online 2018 Jan 9. doi: 10.3892/mmr.2018.8410

PMCID:: PMC5802203

Abstract Article PDF–1.6M

Select item 40074456.

Transcription of Angiogenin and Ribonuclease 4 Is Regulated by RNA Polymerase III Elements and a CCCTC Binding Factor (CTCF)-dependent Intragenic Chromatin Loop

Jinghao Sheng, Chi Luo, Yuxiang Jiang, Philip W. Hinds, Zhengping Xu, Guo-fu Hu

J Biol Chem. 2014 May 2; 289(18): 12520–12534. Published online 2014 Mar 21. doi: 10.1074/jbc.M114.551762

PMCID:: PMC4007445

Abstract Article PDF–3.2M

Select item 38616167.

The HECT Type Ubiquitin Ligase NEDL2 Is Degraded by Anaphase-promoting Complex/Cyclosome (APC/C)-Cdh1, and Its Tight Regulation Maintains the Metaphase to Anaphase Transition

Li Lu, Shaohua Hu, Rongfei Wei, Xiao Qiu, Kefeng Lu, Yesheng Fu, Hongchang Li, Guichun Xing, Dong Li, Ruiyun Peng, Fuchu He, Lingqiang Zhang

J Biol Chem. 2013 Dec 13; 288(50): 35637–35650. Published online 2013 Oct 25. doi: 10.1074/jbc.M113.472076

PMCID:: PMC3861616

Abstract Article PDF–4.4M

Select item 35827448.

Ribonuclease 4 protects neuron degeneration by promoting angiogenesis, neurogenesis, and neuronal survival under stress

Shuping Li, Jinghao Sheng, Jamie K. Hu, Wenhao Yu, Hiroko Kishikawa, Miaofen G. Hu, Kaori Shima, David Wu, Zhengping Xu, Winnie Xin, Katherine B. Sims, John E. Landers, Robert H. Brown, Jr., Guo-fu Hu

Angiogenesis. Author manuscript; available in PMC 2014 Apr 1.

Published in final edited form as: Angiogenesis. 2013 Apr; 16(2): 387–404. Published online 2012 Nov 10. doi: 10.1007/s10456-012-9322-9

PMCID:: PMC3582744

Abstract Article PDF–2.7M

Select item 35272769.

A Synthetic Interaction Screen Identifies Factors Selectively Required for Proliferation and TERT Transcription in p53-Deficient Human Cancer Cells

Li Xie, Claude Gazin, Sung Mi Park, Lihua J. Zhu, Marie-anne Debily, Ellen L. W. Kittler, Maria L. Zapp, David Lapointe, Stephane Gobeil, Ching-Man Virbasius, Michael R. Green

PLoS Genet. 2012 Dec; 8(12): e1003151. Published online 2012 Dec 20. doi: 10.1371/journal.pgen.1003151

PMCID:: PMC3527276

Abstract Article PDF–1.8M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 288055811.

Use of Genome-Wide Expression Data to Mine the “Gray Zone” of GWA Studies Leads to Novel Candidate Obesity Genes

Jussi Naukkarinen, Ida Surakka, Kirsi H. Pietiläinen, Aila Rissanen, Veikko Salomaa, Samuli Ripatti, Hannele Yki-Järvinen, Cornelia M. van Duijn, H.-Erich Wichmann, Jaakko Kaprio, Marja-Riitta Taskinen, Leena Peltonen, ENGAGE Consortium

PLoS Genet. 2010 Jun; 6(6): e1000976. Published online 2010 Jun 3. doi: 10.1371/journal.pgen.1000976

PMCID:: PMC2880558

Abstract Article PDF–216K

Select item 135612912.

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano

Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406

PMCID:: PMC1356129

Abstract Article PDF–438K

Select item 52892813.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 30738214.

Human ribonuclease 4 (RNase 4): coding sequence, chromosomal localization and identification of two distinct transcripts in human somatic tissues.

H F Rosenberg, K D Dyer

Nucleic Acids Res. 1995 Nov 11; 23(21): 4290–4295. doi: 10.1093/nar/23.21.4290

PMCID:: PMC307382

Summary Page Browse PDF–1.0M

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 6498816.

Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver

Xiang-Ru Xu, Jian Huang, Zhi-Gang Xu, Bin-Zhi Qian, Zhi-Dong Zhu, Qing Yan, Ting Cai, Xin Zhang, Hua-Sheng Xiao, Jian Qu, Feng Liu, Qiu-Hua Huang, Zhi-Hong Cheng, Neng-Gan Li, Jian-Jun Du, Wei Hu, Kun-Tang Shen, Gang Lu, Gang Fu, Ming Zhong, Shu-Hua Xu, Wen-Yi Gu, Wei Huang, Xin-Tai Zhao, Geng-Xi Hu, Jian-Ren Gu, Zhu Chen, Ze-Guang Han

Proc Natl Acad Sci U S A. 2001 Dec 18; 98(26): 15089–15094. doi: 10.1073/pnas.241522398

PMCID:: PMC64988

Abstract Article PDF–341K

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