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Items: 1 to 20 of 23

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
FAN1’s protection against CGG repeat expansion requires its nuclease activity and is FANCD2-independent
Xiaonan Zhao, Huiyan Lu, Karen Usdin
Nucleic Acids Res. 2021 Nov 18; 49(20): 11643–11652. Published online 2021 Oct 28. doi: 10.1093/nar/gkab899
PMCID:
PMC8599916
AbstractArticlePDF–1.5M
3.
FAN1 controls mismatch repair complex assembly via MLH1 retention to stabilize CAG repeat expansion in Huntington’s disease
Robert Goold, Joseph Hamilton, Thomas Menneteau, Michael Flower, Emma L. Bunting, Sarah G. Aldous, Antonio Porro, José R. Vicente, Nicholas D. Allen, Hilary Wilkinson, Gillian P. Bates, Alessandro A. Sartori, Konstantinos Thalassinos, Gabriel Balmus, Sarah J. Tabrizi
Cell Rep. 2021 Aug 31; 36(9): 109649. Published online 2021 Aug 31. doi: 10.1016/j.celrep.2021.109649
PMCID:
PMC8424649
AbstractArticlePDF–2.9M
4.
Promotion of somatic CAG repeat expansion by Fan1 knock-out in Huntington’s disease knock-in mice is blocked by Mlh1 knock-out
Jacob M Loupe, Ricardo Mouro Pinto, Kyung-Hee Kim, Tammy Gillis, Jayalakshmi S Mysore, Marissa A Andrew, Marina Kovalenko, Ryan Murtha, IhnSik Seong, James F Gusella, Seung Kwak, David Howland, Ramee Lee, Jong-Min Lee, Vanessa C Wheeler, Marcy E MacDonald
Hum Mol Genet. 2020 Sep 15; 29(18): 3044–3053. Published online 2020 Sep 2. doi: 10.1093/hmg/ddaa196
PMCID:
PMC7645713
AbstractArticlePDF–952K
5.
DNA crosslink repair safeguards genomic stability during pre-meiotic germ cell development
Ross J Hill, Gerry P Crossan
Nat Genet. Author manuscript; available in PMC 2020 Jan 31.
Published in final edited form as: Nat Genet. 2019 Jul 4; 51(8): 1283–1294. Published online 2019 Jul 31. doi: 10.1038/s41588-019-0471-2
PMCID:
PMC6675612
AbstractArticlePDF–3.5M
6.
Mouse Model of Chromosome 15q13.3 Microdeletion Syndrome Demonstrates Features Related to Autism Spectrum Disorder
Jeffrey H. Kogan, Adam K. Gross, Robert E. Featherstone, Rick Shin, Qian Chen, Carrie L. Heusner, Megumi Adachi, Amy Lin, Noah M. Walton, Sosuke Miyoshi, Shinichi Miyake, Katsunori Tajinda, Hiroyuki Ito, Steven J. Siegel, Mitsuyuki Matsumoto
J Neurosci. 2015 Dec 9; 35(49): 16282–16294. doi: 10.1523/JNEUROSCI.3967-14.2015
PMCID:
PMC6605504
AbstractArticlePDF–2.8M
7.
FAN1 protects against repeat expansions in a Fragile X mouse model.
Xiao-Nan Zhao, Karen Usdin
DNA Repair (Amst) Author manuscript; available in PMC 2019 Sep 1.
Published in final edited form as: DNA Repair (Amst). 2018 Sep; 69: 1–5. Published online 2018 Jul 5. doi: 10.1016/j.dnarep.2018.07.001
PMCID:
PMC6119480
AbstractArticlePDF–1.0M
8.
High-throughput discovery of novel developmental phenotypes
Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray
Nature. Author manuscript; available in PMC 2017 Mar 14.
Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356
Correction in:
Nature. 2017 Nov 16; 551(7680): 398.
PMCID:
PMC5295821
AbstractArticlePDF–3.0M
9.
Upregulation of μ3A Drives Homeostatic Plasticity by Re-Routing AMPAR into the Recycling Endosomal Pathway
Celine C. Steinmetz, Vedakumar Tatavarty, Ken Sugino, Yasuyuki Shima, Anne Joseph, Heather Lin, Michael Rutlin, Mary Lambo, Chris M. Hempel, Benjamin W. Okaty, Suzanne Paradis, Sacha B. Nelson, Gina G. Turrigiano
Cell Rep. Author manuscript; available in PMC 2017 Jan 11.
Published in final edited form as: Cell Rep. 2016 Sep 6; 16(10): 2711–2722. Published online 2016 Aug 25. doi: 10.1016/j.celrep.2016.08.009
PMCID:
PMC5226429
AbstractArticlePDF–2.1M
10.
A FANCD2/FANCI-Associated Nuclease 1-Knockout Model Develops Karyomegalic Interstitial Nephritis
Rannar Airik, Markus Schueler, Merlin Airik, Jang Cho, Jonathan D. Porath, Elina Mukherjee, Sunder Sims-Lucas, Friedhelm Hildebrandt
J Am Soc Nephrol. 2016 Dec; 27(12): 3552–3559. Published online 2016 Mar 29. doi: 10.1681/ASN.2015101108
PMCID:
PMC5118483
AbstractArticle
11.
Fan1 deficiency results in DNA interstrand cross-link repair defects, enhanced tissue karyomegaly, and organ dysfunction
Supawat Thongthip, Marina Bellani, Siobhan Q. Gregg, Sunandini Sridhar, Brooke A. Conti, Yanglu Chen, Michael M. Seidman, Agata Smogorzewska
Genes Dev. 2016 Mar 15; 30(6): 645–659. doi: 10.1101/gad.276261.115
PMCID:
PMC4803051
AbstractArticlePDF–1.3M
12.
Karyomegalic interstitial nephritis and DNA damage-induced polyploidy in Fan1 nuclease-defective knock-in mice
Christophe Lachaud, Meghan Slean, Francesco Marchesi, Claire Lock, Edward Odell, Dennis Castor, Rachel Toth, John Rouse
Genes Dev. 2016 Mar 15; 30(6): 639–644. doi: 10.1101/gad.276287.115
PMCID:
PMC4803050
AbstractArticlePDF–446K
13.
Ubiquitinated Fancd2 recruits Fan1 to stalled replication forks to prevent genome instability
Christophe Lachaud, Alberto Moreno, Francesco Marchesi, Rachel Toth, J. Julian Blow, John Rouse
Science. Author manuscript; available in PMC 2016 Aug 19.
Published in final edited form as: Science. 2016 Feb 19; 351(6275): 846–849. Published online 2016 Jan 21. doi: 10.1126/science.aad5634
PMCID:
PMC4770513
AbstractArticlePDF–1.3M
14.
FAN1 Activity on Asymmetric Repair Intermediates Is Mediated by an Atypical Monomeric Virus-type Replication-Repair Nuclease Domain
Simon Pennell, Anne-Cécile Déclais, Jiejin Li, Lesley F. Haire, Wioletta Berg, José W. Saldanha, Ian A. Taylor, John Rouse, David M.J. Lilley, Stephen J. Smerdon
Cell Rep. 2014 Jul 10; 8(1): 84–93. Published online 2014 Jun 26. doi: 10.1016/j.celrep.2014.06.001
PMCID:
PMC4103454
AbstractArticle
15.
Fine-mapping quantitative trait loci affecting murine external ear tissue regeneration in the LG/J by SM/J advanced intercross line
J M Cheverud, H A Lawson, K Bouckaert, A V Kossenkov, L C Showe, L Cort, E P Blankenhorn, K Bedelbaeva, D Gourevitch, Y Zhang, E Heber-Katz
Heredity (Edinb) 2014 May; 112(5): 508–518. Published online 2014 Feb 26. doi: 10.1038/hdy.2013.133
PMCID:
PMC3998788
AbstractArticlePDF–1.8M
16.
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data
Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen Parkinson
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D802–D809. Published online 2013 Nov 3. doi: 10.1093/nar/gkt977
PMCID:
PMC3964955
AbstractArticlePDF–5.7M
17.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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