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Items: 1 to 20 of 24

1.
PHF2 regulates genome topology and DNA replication in neural stem cells via cohesin
Jia Feng, You Heng Chuah, Yajing Liang, Nadia Omega Cipta, Yingying Zeng, Tushar Warrier, Gamal Ahmed Rashed Elsayed Elfar, Jeehyun Yoon, Oleg V Grinchuk, Emmy Xue Yun Tay, Ker-Zhing Lok, Zong-Qing Zheng, Zi Jian Khong, Zheng-Shan Chong, Jackie Teo, Emma May Sanford, Cheryl Jia Yi Neo, Hsin Yao Chiu, Jia Yu Leung, Loo Chien Wang, Yan Ting Lim, Tianyun Zhao, Radoslaw M Sobota, Karen Carmelina Crasta, Vinay Tergaonkar, Reshma Taneja, Shi-Yan Ng, Chit Fang Cheok, Shuo-Chien Ling, Yuin-Han Loh, Derrick Sek Tong Ong
Nucleic Acids Res. 2024 Jul 8; 52(12): 7063–7080. Published online 2024 May 29. doi: 10.1093/nar/gkae457
PMCID:
PMC11229317
AbstractArticlePDF–3.1M
2.
PHF2 regulates sarcomeric gene transcription in myogenesis
Taku Fukushima, Yuka Hasegawa, Sachi Kuse, Taiju Fujioka, Takeshi Nikawa, Satoru Masubuchi, Iori Sakakibara
PLoS One. 2024; 19(5): e0301690. Published online 2024 May 3. doi: 10.1371/journal.pone.0301690
PMCID:
PMC11068198
AbstractArticlePDF–2.0M
3.
Identification of Jmjd3 as an Essential Epigenetic Regulator of Hox Gene Temporal Collinear Activation for Body Axial Patterning in Mice
Feng Zhang, Xiong Zhao, Runmin Jiang, Yuying Wang, Xinli Wang, Yu Gu, Longyong Xu, Jing Ye, Charlie Degui Chen, Shuangping Guo, Dawei Zhang, Daqing Zhao
Front Cell Dev Biol. 2021; 9: 642931. Published online 2021 Jul 21. doi: 10.3389/fcell.2021.642931
PMCID:
PMC8333871
AbstractArticlePDF–1.4M
4.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
5.
TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation
Xiaochen Fan, V Pragathi Masamsetti, Jane QJ Sun, Kasper Engholm-Keller, Pierre Osteil, Joshua Studdert, Mark E Graham, Nicolas Fossat, Patrick PL Tam
eLife. 2021; 10: e62873. Published online 2021 Feb 8. doi: 10.7554/eLife.62873
PMCID:
PMC7968925
AbstractArticlePDF–4.0M
6.
PHF2 histone demethylase prevents DNA damage and genome instability by controlling cell cycle progression of neural progenitors
Stella Pappa, Natalia Padilla, Simona Iacobucci, Marta Vicioso, Elena Álvarez de la Campa, Claudia Navarro, Elia Marcos, Xavier de la Cruz, Marian A. Martínez-Balbás
Proc Natl Acad Sci U S A. 2019 Sep 24; 116(39): 19464–19473. Published online 2019 Sep 5. doi: 10.1073/pnas.1903188116
PMCID:
PMC6765295
AbstractArticlePDF–2.0M
7.
Histone demethylase PHF2 activates CREB and promotes memory consolidation
Hye‐Jin Kim, Sung Won Hur, Jun Bum Park, Jieun Seo, Jae Jin Shin, Seon‐Young Kim, Myoung‐Hwan Kim, Do Hyun Han, Jong‐Wan Park, Joo Min Park, Sang Jeong Kim, Yang‐Sook Chun
EMBO Rep. 2019 Sep; 20(9): e45907. Published online 2019 Jul 30. doi: 10.15252/embr.201845907
PMCID:
PMC6726911
AbstractArticlePDF–1.8M
8.
The histone demethylase Phf2 acts as a molecular checkpoint to prevent NAFLD progression during obesity
Julien Bricambert, Marie-Clotilde Alves-Guerra, Pauline Esteves, Carina Prip-Buus, Justine Bertrand-Michel, Hervé Guillou, Christopher J. Chang, Mark N. Vander Wal, François Canonne-Hergaux, Philippe Mathurin, Violeta Raverdy, François Pattou, Jean Girard, Catherine Postic, Renaud Dentin
Nat Commun. 2018; 9: 2092. Published online 2018 May 29. doi: 10.1038/s41467-018-04361-y
PMCID:
PMC5974278
AbstractArticlePDF–4.6M
9.
Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression
Lori Borgal, Markus M. Rinschen, Claudia Dafinger, Valérie I. Liebrecht, Hinrich Abken, Thomas Benzing, Bernhard Schermer
Cell Cycle. 2016; 15(8): 1034–1045. Published online 2016 Feb 26. doi: 10.1080/15384101.2016.1152429
PMCID:
PMC4889251
AbstractArticlePDF–1.1M
10.
The Histone Demethylase PHF2 Promotes Fat Cell Differentiation as an Epigenetic Activator of Both C/EBPα and C/EBPδ
Kyoung-Hwa Lee, Uk-Il Ju, Jung-Yup Song, Yang-Sook Chun
Mol Cells. 2014 Oct 31; 37(10): 734–741. Published online 2014 Sep 29. doi: 10.14348/molcells.2014.0180
PMCID:
PMC4213764
AbstractArticlePDF–1.1M
11.
Plant homeodomain finger protein 2 promotes bone formation by demethylating and activating Runx2 for osteoblast differentiation
Hye-Jin Kim, Jong-Wan Park, Kyoung-Hwa Lee, Haejin Yoon, Dong Hoon Shin, Uk-Il Ju, Seung Hyeok Seok, Seung Hyeon Lim, Zang Hee Lee, Hong-Hee Kim, Yang-Sook Chun
Cell Res. 2014 Oct; 24(10): 1231–1249. Published online 2014 Sep 26. doi: 10.1038/cr.2014.127
PMCID:
PMC4185351
AbstractArticlePDF–1.4M
12.
Epigenetic Regulation of Adipogenesis by PHF2 Histone Demethylase
Yosuke Okuno, Fumiaki Ohtake, Katsuhide Igarashi, Jun Kanno, Takahiro Matsumoto, Ichiro Takada, Shigeaki Kato, Yuuki Imai
Diabetes. 2013 May; 62(5): 1426–1434. Published online 2013 Apr 16. doi: 10.2337/db12-0628
PMCID:
PMC3636657
AbstractArticlePDF–1.3M
13.
Control of Pro-Inflammatory Gene Programs by Regulated Trimethylation and Demethylation of Histone H4K20
Joshua D. Stender, Gabriel Pascual, Wen Liu, Minna U. Kaikkonen, Kevin Do, Nathanael J Spann, Michael Boutros, Norbert Perrimon, Michael G. Rosenfeld, Christopher K. Glass
Mol Cell. Author manuscript; available in PMC 2013 Oct 12.
Published in final edited form as: Mol Cell. 2012 Oct 12; 48(1): 28–38. Published online 2012 Aug 23. doi: 10.1016/j.molcel.2012.07.020
PMCID:
PMC3472359
AbstractArticlePDF–1.5M
14.
Network Organization of the Huntingtin Proteomic Interactome in Mammalian Brain
Dyna I. Shirasaki, Erin R. Greiner, Ismael Al-Ramahi, Michelle Gray, Pinmanee Boontheung, Daniel H. Geschwind, Juan Botas, Giovanni Coppola, Steve Horvath, Joseph A. Loo, X. William Yang
Neuron. Author manuscript; available in PMC 2013 Jul 12.
Published in final edited form as: Neuron. 2012 Jul 12; 75(1): 41–57. doi: 10.1016/j.neuron.2012.05.024
PMCID:
PMC3432264
AbstractArticlePDF–4.9M
15.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
16.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
17.
Recognition of Histone H3K4 Trimethylation by the Plant Homeodomain of PHF2 Modulates Histone Demethylation
Hong Wen, Jingzhi Li, Tanjing Song, Ming Lu, Pu-Yeh Kan, Min Gyu Lee, Bingdong Sha, Xiaobing Shi
J Biol Chem. 2010 Mar 26; 285(13): 9322–9326. Published online 2010 Feb 2. doi: 10.1074/jbc.C109.097667
PMCID:
PMC2843180
AbstractArticlePDF–1.3M
18.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
19.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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