PMC Links for GEO Profiles (Select 117102731) - PMC

Select item 106176261.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 90650842.

Functional identification of microRNA-centered complexes in C. elegans

Shilpa Hebbar, Ganesh Panzade, Ajay A. Vashisht, James A. Wohlschlegel, Isana Veksler-Lublinsky, Anna Y. Zinovyeva

Sci Rep. 2022; 12: 7133. Published online 2022 May 3. doi: 10.1038/s41598-022-10771-2

PMCID:: PMC9065084

Abstract Article PDF–2.2M

Select item 83311833.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951764.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 62165905.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 53679256.

A Sterile 20-family kinase and its co-factor CCM-3 regulate contractile ring proteins on germline intercellular bridges

Kathryn Rehain-Bell, Andrew Love, Michael E. Werner, Ian MacLeod, John R. Yates, III, Amy Shaub Maddox

Curr Biol. Author manuscript; available in PMC 2018 Mar 20.

Published in final edited form as: Curr Biol. 2017 Mar 20; 27(6): 860–867. Published online 2017 Mar 9. doi: 10.1016/j.cub.2017.01.058

PMCID:: PMC5367925

Abstract Article PDF–1.3M

Select item 49426127.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 43810828.

The ribonucleotidyl transferase USIP-1 acts with SART3 to promote U6 snRNA recycling

Stefan Rüegger, Takashi S. Miki, Daniel Hess, Helge Großhans

Nucleic Acids Res. 2015 Mar 31; 43(6): 3344–3357. Published online 2015 Mar 9. doi: 10.1093/nar/gkv196

PMCID:: PMC4381082

Abstract Article PDF–4.8M

Select item 41321849.

Proteomic Analysis Reveals CACN-1 Is a Component of the Spliceosome in Caenorhabditis elegans

Michael F. Doherty, Guillaume Adelmant, Alyssa D. Cecchetelli, Jarrod A. Marto, Erin J. Cram

G3 (Bethesda) 2014 Aug; 4(8): 1555–1564. Published online 2014 Jun 19. doi: 10.1534/g3.114.012013

PMCID:: PMC4132184

Abstract Article PDF–1.3M

Select item 367501110.

RSR-2, the Caenorhabditis elegans Ortholog of Human Spliceosomal Component SRm300/SRRM2, Regulates Development by Influencing the Transcriptional Machinery

Laura Fontrodona, Montserrat Porta-de-la-Riva, Tomás Morán, Wei Niu, Mònica Díaz, David Aristizábal-Corrales, Alberto Villanueva, Simó Schwartz, Jr, Valerie Reinke, Julián Cerón

PLoS Genet. 2013 Jun; 9(6): e1003543. Published online 2013 Jun 6. doi: 10.1371/journal.pgen.1003543

PMCID:: PMC3675011

Abstract Article PDF–3.0M

Select item 333735711.

Sm protein down-regulation leads to defects in nuclear pore complex disassembly and distribution in C. elegans embryos

Daphna Joseph-Strauss, Mátyás Gorjánácz, Rachel Santarella-Mellwig, Ekaterina Voronina, Anjon Audhya, Orna Cohen-Fix

Dev Biol. Author manuscript; available in PMC 2013 May 15.

Published in final edited form as: Dev Biol. 2012 May 15; 365(2): 445–457. Published online 2012 Mar 8. doi: 10.1016/j.ydbio.2012.02.036

PMCID:: PMC3337357

Abstract Article PDF–3.2M

Select item 310207712.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 305792313.

Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network

Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2011 Mar 15.

Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279

PMCID:: PMC3057923

Abstract Article PDF–3.0M

Select item 259647814.

A protein domain-based interactome network for C. elegans early embryogenesis

Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D. Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A. Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P. Roth, Lilia M. Iakoucheva, A. Keith Dunker, Richard Bonneau, Kristin C. Gunsalus, David E. Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A. Hyman, Marc Vidal

Cell. Author manuscript; available in PMC 2009 Aug 8.

Published in final edited form as: Cell. 2008 Aug 8; 134(3): 534–545. doi: 10.1016/j.cell.2008.07.009

Correction in:: volume 151 on page 1633

PMCID:: PMC2596478

Abstract Article PDF–4.0M

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