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Items: 16

1.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
2.
ssDNA reeling is an intermediate step in the reiterative DNA unwinding activity of the WRN-1 helicase
Son Truong Le, Seoyun Choi, Seung-Won Lee, Hajin Kim, Byungchan Ahn
J Biol Chem. 2023 Sep; 299(9): 105081. Published online 2023 Jul 24. doi: 10.1016/j.jbc.2023.105081
PMCID:
PMC10480542
AbstractArticlePDF–5.3M
3.
R-loop-induced irreparable DNA damage evades checkpoint detection in the C. elegans germline
Tara Hicks, Emily Koury, Caleb McCabe, Cameron Williams, Caroline Crahan, Sarit Smolikove
Nucleic Acids Res. 2022 Aug 12; 50(14): 8041–8059. Published online 2022 Jul 25. doi: 10.1093/nar/gkac621
PMCID:
PMC9371901
AbstractArticlePDF–8.9M
4.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
5.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
6.
RPA complexes in Caenorhabditis elegans meiosis; unique roles in replication, meiotic recombination and apoptosis
Adam Hefel, Masayoshi Honda, Nicholas Cronin, Kailey Harrell, Pooja Patel, Maria Spies, Sarit Smolikove
Nucleic Acids Res. 2021 Feb 26; 49(4): 2005–2026. Published online 2021 Jan 21. doi: 10.1093/nar/gkaa1293
Correction in:
Nucleic Acids Res. 2021 Sep 7; 49(15): 9003.
PMCID:
PMC7913698
AbstractArticlePDF–5.1M
7.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
8.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
9.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
10.
DNA double-strand break repair in Caenorhabditis elegans
Bennie B. L. G. Lemmens, Marcel Tijsterman
Chromosoma. 2011; 120(1): 1–21. Published online 2010 Nov 5. doi: 10.1007/s00412-010-0296-3
Correction in:
Chromosoma. 2011 Jun; 120(3): 321.
PMCID:
PMC3028100
AbstractArticlePDF–676K
11.
A soma-to-germline transformation in long-lived C. elegans mutants
Sean P. Curran, Xiaoyun Wu, Christian G. Riedel, Gary Ruvkun
Nature. Author manuscript; available in PMC 2009 Dec 25.
Published in final edited form as: Nature. 2009 Jun 25; 459(7250): 1079–1084. Published online 2009 Jun 7. doi: 10.1038/nature08106
PMCID:
PMC2716045
AbstractArticlePDF–1.2M
12.
Biochemical Characterization of the WRN-1 RecQ Helicase of Caenorhabditis elegans
Moonjung Hyun, Vilhelm A. Bohr, Byungchan Ahn
Biochemistry. Author manuscript; available in PMC 2008 Nov 17.
Published in final edited form as: Biochemistry. 2008 Jul 15; 47(28): 7583–7593. Published online 2008 Jun 18. doi: 10.1021/bi800197m
PMCID:
PMC2583433
AbstractArticlePDF–1.1M
13.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M
14.
RAD-51-Dependent and -Independent Roles of a Caenorhabditis elegans BRCA2-Related Protein during DNA Double-Strand Break Repair
Julie S. Martin, Nicole Winkelmann, Mark I. R. Petalcorin, Michael J. McIlwraith, Simon J. Boulton
Mol Cell Biol. 2005 Apr; 25(8): 3127–3139. doi: 10.1128/MCB.25.8.3127-3139.2005
PMCID:
PMC1069622
AbstractArticlePDF–1.4M
15.
Enzymatic properties of the Caenorhabditis elegans Dna2 endonuclease/helicase and a species-specific interaction between RPA and Dna2
Do-Hyung Kim, Kyoung-Hwa Lee, Jeong-Hoon Kim, Gi-Hyuck Ryu, Sung-Ho Bae, Byung-Chul Lee, Kyeong-Yeop Moon, Si-Myung Byun, Hyeon-Sook Koo, Yeon-Soo Seo
Nucleic Acids Res. 2005; 33(4): 1372–1383. Published online 2005 Mar 3. doi: 10.1093/nar/gki255
PMCID:
PMC552954
AbstractArticlePDF–505K
16.
Identification of genes that protect the C. elegans genome against mutations by genome-wide RNAi
Joris Pothof, Gijs van Haaften, Karen Thijssen, Ravi S. Kamath, Andrew G. Fraser, Julie Ahringer, Ronald H.A. Plasterk, Marcel Tijsterman
Genes Dev. 2003 Feb 15; 17(4): 443–448. doi: 10.1101/gad.1060703
PMCID:
PMC195995
AbstractArticlePDF–297K

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