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Items: 18

1.
Autophagy protein ATG-16.2 and its WD40 domain mediate the beneficial effects of inhibiting early-acting autophagy genes in C. elegans neurons
Yongzhi Yang, Meghan Lee Arnold, Caitlin M. Lange, Ling-Hsuan Sun, Michael Broussalian, Saam Doroodian, Hiroshi Ebata, Elizabeth H. Choy, Karie Poon, Tatiana M. Moreno, Anupama Singh, Monica Driscoll, Caroline Kumsta, Malene Hansen
Nat Aging. Author manuscript; available in PMC 2024 Apr 17.
Published in final edited form as: Nat Aging. 2024 Feb; 4(2): 198–212. Published online 2024 Jan 4. doi: 10.1038/s43587-023-00548-1
PMCID:
PMC11022750
AbstractArticlePDF–4.4M
2.
Autophagy Regulation Influences β-Amyloid Toxicity in Transgenic Caenorhabditis elegans
Hongru Lin, Yehui Gao, Chen Zhang, Botian Ma, Mengchen Wu, Xianghuan Cui, Hongbing Wang
Front Aging Neurosci. 2022; 14: 885145. Published online 2022 May 12. doi: 10.3389/fnagi.2022.885145
PMCID:
PMC9133694
AbstractArticlePDF–2.3M
3.
Variants in ATP6V0A1 cause progressive myoclonus epilepsy and developmental and epileptic encephalopathy
Laura C Bott, Mitra Forouhan, Maria Lieto, Ambre J Sala, Ruth Ellerington, Janel O Johnson, Alfina A Speciale, Chiara Criscuolo, Alessandro Filla, David Chitayat, Ebba Alkhunaizi, Patrick Shannon, Andrea H Nemeth, Italian Undiagnosed Diseases Network , Francesco Angelucci, Wooi Fang Lim, Pasquale Striano, Federico Zara, Ingo Helbig, Mikko Muona, Carolina Courage, Anna-Elina Lehesjoki, Samuel F Berkovic, ATPase Consortium , Kenneth H Fischbeck, Francesco Brancati, Richard I Morimoto, Matthew J A Wood, Carlo Rinaldi
Brain Commun. 2021; 3(4): fcab245. Published online 2021 Oct 18. doi: 10.1093/braincomms/fcab245
PMCID:
PMC8665645
AbstractArticlePDF–1.2M
4.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
5.
Molecular Basis of Neuronal Autophagy in Ageing: Insights from Caenorhabditis elegans
Georgios Konstantinidis, Nektarios Tavernarakis
Cells. 2021 Mar; 10(3): 694. Published online 2021 Mar 21. doi: 10.3390/cells10030694
PMCID:
PMC8004021
AbstractArticlePDF–1.0M
6.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
7.
The Role of ATG16 in Autophagy and The Ubiquitin Proteasome System
Qiuhong Xiong, Wenjing Li, Ping Li, Min Yang, Changxin Wu, Ludwig Eichinger
Cells. 2019 Jan; 8(1): 2. Published online 2018 Dec 20. doi: 10.3390/cells8010002
PMCID:
PMC6356889
AbstractArticlePDF–1.7M
8.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
9.
Molecular definitions of autophagy and related processes
Lorenzo Galluzzi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo‐San Pedro, Francesco Cecconi, Augustine M Choi, Charleen T Chu, Patrice Codogno, Maria Isabel Colombo, Ana Maria Cuervo, Jayanta Debnath, Vojo Deretic, Ivan Dikic, Eeva‐Liisa Eskelinen, Gian Maria Fimia, Simone Fulda, David A Gewirtz, Douglas R Green, Malene Hansen, J Wade Harper, Marja Jäättelä, Terje Johansen, Gabor Juhasz, Alec C Kimmelman, Claudine Kraft, Nicholas T Ktistakis, Sharad Kumar, Beth Levine, Carlos Lopez‐Otin, Frank Madeo, Sascha Martens, Jennifer Martinez, Alicia Melendez, Noboru Mizushima, Christian Münz, Leon O Murphy, Josef M Penninger, Mauro Piacentini, Fulvio Reggiori, David C Rubinsztein, Kevin M Ryan, Laura Santambrogio, Luca Scorrano, Anna Katharina Simon, Hans‐Uwe Simon, Anne Simonsen, Nektarios Tavernarakis, Sharon A Tooze, Tamotsu Yoshimori, Junying Yuan, Zhenyu Yue, Qing Zhong, Guido Kroemer
EMBO J. 2017 Jul 3; 36(13): 1811–1836. Published online 2017 Jun 8. doi: 10.15252/embj.201796697
PMCID:
PMC5494474
AbstractArticlePDF–1.0M
10.
A cell non-autonomous role of BEC-1/Beclin1 in coordinating cell cycle progression and stem cell proliferation during germline development
K. Ames, D.S. Da Cunha, B. Gonzalez, M. Konta, F. Lin, G. Schechter, L. Starikov, S. Wong, H.E. Bülow, A. Meléndez
Curr Biol. Author manuscript; available in PMC 2018 Mar 20.
Published in final edited form as: Curr Biol. 2017 Mar 20; 27(6): 905–913. Published online 2017 Mar 9. doi: 10.1016/j.cub.2017.02.015
PMCID:
PMC5389117
AbstractArticlePDF–1.7M
11.
Graded Proteasome Dysfunction in Caenorhabditis elegans Activates an Adaptive Response Involving the Conserved SKN-1 and ELT-2 Transcription Factors and the Autophagy-Lysosome Pathway
Scott A. Keith, Sarah K. Maddux, Yayu Zhong, Meghna N. Chinchankar, Annabel A. Ferguson, Arjumand Ghazi, Alfred L. Fisher
PLoS Genet. 2016 Feb; 12(2): e1005823. Published online 2016 Feb 1. doi: 10.1371/journal.pgen.1005823
PMCID:
PMC4734690
AbstractArticlePDF–15M
12.
INNATE HOST DEFENSE REQUIRES TFEB-MEDIATED TRANSCRIPTION OF CYTOPROTECTIVE AND ANTIMICROBIAL GENES
Orane Visvikis, Nnamdi Ihuegbu, Sid A. Labed, Lyly G. Luhachack, Anna-Maria F. Alves, Amanda C. Wollenberg, Lynda M. Stuart, Gary D. Stormo, Javier E. Irazoqui
Immunity. Author manuscript; available in PMC 2015 Jun 19.
Published in final edited form as: Immunity. 2014 Jun 19; 40(6): 896–909. Published online 2014 May 29. doi: 10.1016/j.immuni.2014.05.002
PMCID:
PMC4104614
AbstractArticlePDF–2.4M
13.
The two C. elegans ATG-16 homologs have partially redundant functions in the basal autophagy pathway
Hui Zhang, Fan Wu, Xingwei Wang, Hongwei Du, Xiaochen Wang, Hong Zhang
Autophagy. 2013 Dec 1; 9(12): 1965–1974. Published online 2013 Sep 5. doi: 10.4161/auto.26095
PMCID:
PMC4028341
AbstractArticlePDF–2.7M
14.
ω-6 Polyunsaturated fatty acids extend life span through the activation of autophagy
Eyleen J. O'Rourke, Petric Kuballa, Ramnik Xavier, Gary Ruvkun
Genes Dev. 2013 Feb 15; 27(4): 429–440. doi: 10.1101/gad.205294.112
PMCID:
PMC3589559
AbstractArticlePDF–1.6M
15.
Autophagy and lipid metabolism coordinately modulate lifespan in germline-less C. elegans
Louis R. Lapierre, Sara Gelino, Alicia Meléndez, Malene Hansen
Curr Biol. Author manuscript; available in PMC 2012 Sep 27.
Published in final edited form as: Curr Biol. 2011 Sep 27; 21(18): 1507–1514. Published online 2011 Sep 8. doi: 10.1016/j.cub.2011.07.042
PMCID:
PMC3191188
AbstractArticlePDF–1014K
16.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
17.
An Integrated Strategy to Study Muscle Development and Myofilament Structure in Caenorhabditis elegans
Barbara Meissner, Adam Warner, Kim Wong, Nicholas Dube, Adam Lorch, Sheldon J. McKay, Jaswinder Khattra, Teresa Rogalski, Aruna Somasiri, Iasha Chaudhry, Rebecca M. Fox, David M. Miller, III, David L. Baillie, Robert A. Holt, Steven J. M. Jones, Marco A. Marra, Donald G. Moerman
PLoS Genet. 2009 Jun; 5(6): e1000537. Published online 2009 Jun 26. doi: 10.1371/journal.pgen.1000537
PMCID:
PMC2694363
AbstractArticlePDF–1.3M
18.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M

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