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Items: 19

1.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
2.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
3.
KH domain containing RNA-binding proteins coordinate with microRNAs to regulate Caenorhabditis elegans development
Dustin Haskell, Anna Zinovyeva
G3 (Bethesda) 2021 Feb; 11(2): jkab013. Published online 2021 Jan 23. doi: 10.1093/g3journal/jkab013
PMCID:
PMC8022929
AbstractArticlePDF–1.0M
4.
ALG-1 Influences Accurate mRNA Splicing Patterns in the Caenorhabditis elegans Intestine and Body Muscle Tissues by Modulating Splicing Factor Activities
Kasuen Kotagama, Anna L. Schorr, Hannah S. Steber, Marco Mangone
Genetics. 2019 Jul; 212(3): 931–951. Published online 2019 May 9. doi: 10.1534/genetics.119.302223
PMCID:
PMC6614907
AbstractArticlePDF–2.2M
5.
Dietary restriction induces posttranscriptional regulation of longevity genes
Jarod A Rollins, Dan Shaffer, Santina S Snow, Pankaj Kapahi, Aric N Rogers
Life Sci Alliance. 2019 Aug; 2(4): e201800281. Published online 2019 Jun 28. doi: 10.26508/lsa.201800281
PMCID:
PMC6600014
AbstractArticlePDF–2.3M
6.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
7.
Switch-like regulation of tissue-specific alternative pre-mRNA processing patterns revealed by customized fluorescence reporters
Hidehito Kuroyanagi
Worm. 2013 Jul 1; 2(3): e23834. Published online 2013 Oct 25. doi: 10.4161/worm.23834
PMCID:
PMC3875643
AbstractArticlePDF–765K
8.
RNA-binding protein GLD-1/quaking genetically interacts with the mir-35 and the let-7 miRNA pathways in Caenorhabditis elegans
Alper Akay, Ashley Craig, Nicolas Lehrbach, Mark Larance, Ehsan Pourkarimi, Jane E. Wright, Angus Lamond, Eric Miska, Anton Gartner
Open Biol. 2013 Nov; 3(11): 130151. doi: 10.1098/rsob.130151
PMCID:
PMC3843822
AbstractArticlePDF–1.1M
9.
Muscle-Specific Splicing Factors ASD-2 and SUP-12 Cooperatively Switch Alternative Pre-mRNA Processing Patterns of the ADF/Cofilin Gene in Caenorhabditis elegans
Genta Ohno, Kanako Ono, Marina Togo, Yohei Watanabe, Shoichiro Ono, Masatoshi Hagiwara, Hidehito Kuroyanagi
PLoS Genet. 2012 Oct; 8(10): e1002991. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002991
PMCID:
PMC3469465
AbstractArticlePDF–7.4M
10.
Allelic Ratios and the Mutational Landscape Reveal Biologically Significant Heterozygous SNVs
Jeffrey S.-C. Chu, Robert C. Johnsen, Shu Yi Chua, Domena Tu, Mark Dennison, Marco Marra, Steven J. M. Jones, David L. Baillie, Ann M. Rose
Genetics. 2012 Apr; 190(4): 1225–1233. doi: 10.1534/genetics.111.137208
PMCID:
PMC3316639
AbstractArticlePDF–4.2M
11.
CCDC-55 is required for larval development and distal tip cell migration in C. elegans
Ismar Kovacevic, Richard Ho, Erin J. Cram
Mech Dev. Author manuscript; available in PMC 2013 Jan 20.
Published in final edited form as: Mech Dev. 2012 Jan; 128(11-12): 548–559. Published online 2012 Jan 20. doi: 10.1016/j.mod.2012.01.003
PMCID:
PMC3295921
AbstractArticlePDF–1.2M
12.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
13.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
14.
High-affinity consensus binding of target RNAs by the STAR/GSG proteins GLD-1, STAR-2 and Quaking
Andrew B Carmel, Joann Wu, Katrina A Lehmann-Blount, James R Williamson
BMC Mol Biol. 2010; 11: 48. Published online 2010 Jun 23. doi: 10.1186/1471-2199-11-48
PMCID:
PMC2905418
AbstractArticlePDF–822K
15.
STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo
Genta Ohno, Masatoshi Hagiwara, Hidehito Kuroyanagi
Genes Dev. 2008 Feb 1; 22(3): 360–374. doi: 10.1101/gad.1620608
PMCID:
PMC2216695
AbstractArticlePDF–1.2M
16.
Dynein Modifiers in C. elegans: Light Chains Suppress Conditional Heavy Chain Mutants
Sean M O'Rourke, Marc D Dorfman, J. Clayton Carter, Bruce Bowerman
PLoS Genet. 2007 Aug; 3(8): e128. Published online 2007 Aug 3. doi: 10.1371/journal.pgen.0030128
PMCID:
PMC1937013
AbstractArticlePDF–2.0M
17.
Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity
Julian Ceron, Jean-François Rual, Abha Chandra, Denis Dupuy, Marc Vidal, Sander van den Heuvel
BMC Dev Biol. 2007; 7: 30. Published online 2007 Apr 6. doi: 10.1186/1471-213X-7-30
PMCID:
PMC1863419
AbstractArticlePDF–1.4M
18.
Axon guidance genes identified in a large-scale RNAi screen using the RNAi-hypersensitive Caenorhabditis elegans strain nre-1(hd20) lin-15b(hd126)
Caroline Schmitz, Parag Kinge, Harald Hutter
Proc Natl Acad Sci U S A. 2007 Jan 16; 104(3): 834–839. Published online 2007 Jan 9. doi: 10.1073/pnas.0510527104
PMCID:
PMC1783400
AbstractArticlePDF–312K
19.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M

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