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Items: 1 to 20 of 31

1.
Regulatory factor X1 induces macrophage M1 polarization by promoting DNA demethylation in autoimmune inflammation
Shuang Yang, Pei Du, Haobo Cui, Meiling Zheng, Wei He, Xiaofei Gao, Zhi Hu, Sujie Jia, Qianjin Lu, Ming Zhao
JCI Insight. 2023 Oct 23; 8(20): e165546. Published online 2023 Oct 23. doi: 10.1172/jci.insight.165546
PMCID:
PMC10619507
AbstractArticlePDF–5.0M
2.
Ependymoma associated protein Zfta is expressed in immature ependymal cells but is not essential for ependymal development in mice
Vicente Herranz-Pérez, Jin Nakatani, Masaki Ishii, Toshiaki Katada, Jose Manuel García-Verdugo, Shinya Ohata
Sci Rep. 2022; 12: 1493. Published online 2022 Jan 27. doi: 10.1038/s41598-022-05526-y
PMCID:
PMC8795269
AbstractArticlePDF–5.5M
3.
Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1–CoREST interactome during embryonic stem cell differentiation
Claire E. Barnes, David M. English, Megan Broderick, Mark O. Collins, Shaun M. Cowley
Mol Omics. 2022 Jan 17; 18(1): 31–44. Published online 2021 Oct 14. doi: 10.1039/d1mo00236h
PMCID:
PMC8763317
AbstractArticle
4.
Interplay of RFX transcription factors 1, 2 and 3 in motile ciliogenesis
Sylvain Lemeille, Marie Paschaki, Dominique Baas, Laurette Morlé, Jean-Luc Duteyrat, Aouatef Ait-Lounis, Emmanuèle Barras, Fabien Soulavie, Julie Jerber, Joëlle Thomas, Yong Zhang, Michael J Holtzman, W Stephen Kistler, Walter Reith, Bénédicte Durand
Nucleic Acids Res. 2020 Sep 18; 48(16): 9019–9036. Published online 2020 Jul 29. doi: 10.1093/nar/gkaa625
PMCID:
PMC7498320
AbstractArticlePDF–3.8M
5.
Dynamic changes in cis-regulatory occupancy by Six1 and its cooperative interactions with distinct cofactors drive lineage-specific gene expression programs during progressive differentiation of the auditory sensory epithelium
Jun Li, Ting Zhang, Aarthi Ramakrishnan, Bernd Fritzsch, Jinshu Xu, Elaine Y M Wong, Yong-Hwee Eddie Loh, Jianqiang Ding, Li Shen, Pin-Xian Xu
Nucleic Acids Res. 2020 Apr 6; 48(6): 2880–2896. Published online 2020 Jan 20. doi: 10.1093/nar/gkaa012
PMCID:
PMC7102962
AbstractArticlePDF–7.5M
6.
Derepression of sonic hedgehog signaling upon Gpr161 deletion unravels forebrain and ventricular abnormalities
Issei S. Shimada, Bandarigoda N. Somatilaka, Sun-Hee Hwang, Ashley G. Anderson, John M. Shelton, Veena Rajaram, Genevieve Konopka, Saikat Mukhopadhyay
Dev Biol. Author manuscript; available in PMC 2020 Jun 1.
Published in final edited form as: Dev Biol. 2019 Jun 1; 450(1): 47–62. Published online 2019 Mar 23. doi: 10.1016/j.ydbio.2019.03.011
PMCID:
PMC6497453
AbstractArticlePDF–5.3M
7.
Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors
Hyeonwoo Kim, Christiane D. Wrann, Mark Jedrychowski, Sara Vidoni, Yukiko Kitase, Kenichi Nagano, Chenhe Zhou, Joshua Chou, Virginia-Jeni A. Parkman, Scott J. Novick, Timothy S. Strutzenberg, Bruce D. Pascal, Phuong T. Le, Daniel J. Brooks, Alexander M. Roche, Kaitlyn K. Gerber, Laura Mattheis, Wenjing Chen, Hua Tu, Mary L. Bouxsein, Patrick R. Griffin, Roland Baron, Clifford J. Rosen, Lynda F. Bonewald, Bruce M. Spiegelman
Cell. Author manuscript; available in PMC 2019 Dec 13.
Published in final edited form as: Cell. 2018 Dec 13; 175(7): 1756–1768.e17. doi: 10.1016/j.cell.2018.10.025
Correction in:
Cell. 2019 Jul 11; 178(2): 507–508.
PMCID:
PMC6298040
AbstractArticlePDF–1.2M
8.
IL-6/STAT3 pathway induced deficiency of RFX1 contributes to Th17-dependent autoimmune diseases via epigenetic regulation
Ming Zhao, Yixin Tan, Qiao Peng, Cancan Huang, Yu Guo, Gongping Liang, Bochen Zhu, Yi Huang, Aiyun Liu, Zijun Wang, Mengying Li, Xiaofei Gao, Ruifang Wu, Haijing Wu, Hai Long, Qianjin Lu
Nat Commun. 2018; 9: 583. Published online 2018 Feb 8. doi: 10.1038/s41467-018-02890-0
PMCID:
PMC5805701
AbstractArticlePDF–2.6M
9.
RFX transcription factors are essential for hearing in mice
Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano
Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549
PMCID:
PMC4634137
AbstractArticlePDF–5.5M
10.
Evolutionarily Dynamic Alternative Splicing of GPR56 Regulates Regional Cerebral Cortical Patterning
Byoung-Il Bae, Ian Tietjen, Kutay D. Atabay, Gilad D. Evrony, Matthew B. Johnson, Ebenezer Asare, Peter P. Wang, Ayako Y. Murayama, Kiho Im, Steven N. Lisgo, Lynne Overman, Nenad Šestan, Bernard S. Chang, A. James Barkovich, P. Ellen Grant, Meral Topçu, Jeffrey Politsky, Hideyuki Okano, Xianhua Piao, Christopher A. Walsh
Science. Author manuscript; available in PMC 2015 Jun 25.
Published in final edited form as: Science. 2014 Feb 14; 343(6172): 764–768. doi: 10.1126/science.1244392
PMCID:
PMC4480613
AbstractArticlePDF–1.6M
11.
Regulatory Factor X Transcription Factors Control Musashi1 Transcription in Mouse Neural Stem/Progenitor Cells
Satoshi Kawase, Kenichiro Kuwako, Takao Imai, Francois Renault-Mihara, Kunio Yaguchi, Shigeyoshi Itohara, Hideyuki Okano
Stem Cells Dev. 2014 Sep 15; 23(18): 2250–2261. Published online 2014 Jul 24. doi: 10.1089/scd.2014.0219
PMCID:
PMC4155420
AbstractArticlePDF–1.0M
12.
Regulatory factor X1 is a new tumor suppressive transcription factor that acts via direct downregulation of CD44 in glioblastoma
Chenzhuo Feng, Ying Zhang, Jinbo Yin, Jun Li, Roger Abounader, Zhiyi Zuo
Neuro Oncol. 2014 Aug; 16(8): 1078–1085. Published online 2014 Feb 12. doi: 10.1093/neuonc/nou010
PMCID:
PMC4096175
AbstractArticlePDF–639K
13.
Spermatogenesis Associated 4 Promotes Sertoli Cell Proliferation Modulated Negatively by Regulatory Factor X1
Junjun Jiang, Nannan Zhang, Hiroshi Shiba, Liyuan Li, Zhao Wang
PLoS One. 2013; 8(10): e75933. Published online 2013 Oct 11. doi: 10.1371/journal.pone.0075933
PMCID:
PMC3795713
AbstractArticlePDF–3.0M
14.
PRC1 and PRC2 Are Not Required for Targeting of H2A.Z to Developmental Genes in Embryonic Stem Cells
Robert S. Illingworth, Catherine H. Botting, Graeme R. Grimes, Wendy A. Bickmore, Ragnhild Eskeland
PLoS One. 2012; 7(4): e34848. Published online 2012 Apr 9. doi: 10.1371/journal.pone.0034848
PMCID:
PMC3322156
AbstractArticlePDF–1.5M
15.
Expression of the transcription factor regulatory factor X1 in mouse brain
Chenzhuo Feng, Jiejie Li, Zhiyi Zuo
Folia Histochem Cytobiol. Author manuscript; available in PMC 2011 Nov 18.
Published in final edited form as: Folia Histochem Cytobiol. 2011; 49(2): 344–351. doi: 10.5603/fhc.2011.0047
PMCID:
PMC3220163
AbstractArticlePDF–2.1M
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
Study of FoxA Pioneer Factor at Silent Genes Reveals Rfx-Repressed Enhancer at Cdx2 and a Potential Indicator of Esophageal Adenocarcinoma Development
Jason A. Watts, Chaolin Zhang, Andres J. Klein-Szanto, Jay D. Kormish, Jian Fu, Michael Q. Zhang, Kenneth S. Zaret
PLoS Genet. 2011 Sep; 7(9): e1002277. Published online 2011 Sep 15. doi: 10.1371/journal.pgen.1002277
PMCID:
PMC3174211
AbstractArticlePDF–1.2M
18.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
19.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
20.
Rfx6 Directs Islet Formation and Insulin Production in Mice and Humans
Stuart B. Smith, Hui-Qi Qu, Nadine Taleb, Nina Kishimoto, David W. Scheel, Yang Lu, Ann-Marie Patch, Rosemary Grabs, Juehu Wang, Francis C. Lynn, Takeshi Miyatsuka, John Mitchell, Rina Seerke, Julie Désir, Serge Vanden Eijnden, Marc Abramowicz, Nadine Kacet, Jacques Weill, Marie-Éve Renard, Mattia Gentile, Inger Hansen, Ken Dewar, Andrew T. Hattersley, Rennian Wang, Maria E. Wilson, Jeffrey D. Johnson, Constantin Polychronakos, Michael S. German
Nature. Author manuscript; available in PMC 2010 Aug 11.
Published in final edited form as: Nature. 2010 Feb 11; 463(7282): 775–780. doi: 10.1038/nature08748
PMCID:
PMC2896718
AbstractArticlePDF–933K

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