PMC Links for GEO Profiles (Select 115763066) - PMC

Select item 109176601.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 83132392.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 77931373.

Glutamatergic Dysfunction and Synaptic Ultrastructural Alterations in Schizophrenia and Autism Spectrum Disorder: Evidence from Human and Rodent Studies

Ahmed Eltokhi, Andrea Santuy, Angel Merchan-Perez, Rolf Sprengel

Int J Mol Sci. 2021 Jan; 22(1): 59. Published online 2020 Dec 23. doi: 10.3390/ijms22010059

PMCID:: PMC7793137

Abstract Article PDF–950K

Select item 67865174.

Autism candidate gene DIP2A regulates spine morphogenesis via acetylation of cortactin

Jun Ma, Lu-Qing Zhang, Zi-Xuan He, Xiao-Xiao He, Ya-Jun Wang, You-Li Jian, Xin Wang, Bin-Bin Zhang, Ce Su, Jun Lu, Bai-Qu Huang, Yu Zhang, Gui-Yun Wang, Wei-Xiang Guo, De-Lai Qiu, Lin Mei, Wen-Cheng Xiong, Yao-Wu Zheng, Xiao-Juan Zhu

PLoS Biol. 2019 Oct; 17(10): e3000461. Published online 2019 Oct 10. doi: 10.1371/journal.pbio.3000461

PMCID:: PMC6786517

Abstract Article PDF–4.0M

Select item 66195975.

Transcriptome profiling of mouse brain and lung under Dip2a regulation using RNA-sequencing

Rajiv Kumar Sah, Analn Yang, Fatoumata Binta Bah, Salah Adlat, Ameer Ali Bohio, Zin Mar Oo, Chenhao Wang, May Zun Zaw Myint, Noor Bahadar, Luqing Zhang, Xuechao Feng, Yaowu Zheng

PLoS One. 2019; 14(7): e0213702. Published online 2019 Jul 10. doi: 10.1371/journal.pone.0213702

Correction in:: PLoS One. 2019; 14(11): e0225570.

PMCID:: PMC6619597

Abstract Article PDF–1.8M

Select item 64595106.

Mouse screen reveals multiple new genes underlying mouse and human hearing loss

Neil J. Ingham, Selina A. Pearson, Valerie E. Vancollie, Victoria Rook, Morag A. Lewis, Jing Chen, Annalisa Buniello, Elisa Martelletti, Lorenzo Preite, Chi Chung Lam, Felix D. Weiss, Zӧe Powis, Pim Suwannarat, Christopher J. Lelliott, Sally J. Dawson, Jacqueline K. White, Karen P. Steel

PLoS Biol. 2019 Apr; 17(4): e3000194. Published online 2019 Apr 11. doi: 10.1371/journal.pbio.3000194

PMCID:: PMC6459510

Abstract Article PDF–5.1M

Select item 52958217.

High-throughput discovery of novel developmental phenotypes

Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray

Nature. Author manuscript; available in PMC 2017 Mar 14.

Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356

Correction in:: Nature. 2017 Nov 16; 551(7680): 398.

PMCID:: PMC5295821

Abstract Article PDF–3.0M

Select item 46595708.

Expression Patterns and Potential Biological Roles of Dip2a

Luqing Zhang, Humphrey A. Mabwi, Norberto J. Palange, Ruirui Jia, Jun Ma, Fatoumata Binta Bah, Rajiv Kumar Sah, Dan Li, Daji Wang, Fatoumata Binta Maci Bah, Jacques Togo, Honghong Jin, Luying Ban, Xuechao Feng, Yaowu Zheng

PLoS One. 2015; 10(11): e0143284. Published online 2015 Nov 25. doi: 10.1371/journal.pone.0143284

PMCID:: PMC4659570

Abstract Article PDF–12M

Select item 43724429.

Large Genomic Fragment Deletions and Insertions in Mouse Using CRISPR/Cas9

Luqing Zhang, Ruirui Jia, Norberto J. Palange, Achim Cchitvsanzwhoh Satheka, Jacques Togo, Yao An, Mabwi Humphrey, Luying Ban, Yan Ji, Honghong Jin, Xuechao Feng, Yaowu Zheng

PLoS One. 2015; 10(3): e0120396. Published online 2015 Mar 24. doi: 10.1371/journal.pone.0120396

PMCID:: PMC4372442

Abstract Article PDF–4.1M

Select item 357241010.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 300631512.

Follistatin-like 1 regulates renal IL-1β expression in cisplatin nephrotoxicity

Derek C. Adams, Michele J. Karolak, Barry W. Larman, Lucy Liaw, James D. Nolin, Leif Oxburgh

Am J Physiol Renal Physiol. 2010 Dec; 299(6): F1320–F1327. Published online 2010 Sep 29. doi: 10.1152/ajprenal.00325.2010

PMCID:: PMC3006315

Abstract Article

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098214.

Chromosome Evolution: The Junction of Mammalian Chromosomes in the Formation of Mouse Chromosome 10

Mathew T. Pletcher, Bruce A. Roe, Fang Chen, Trang Do, Ahn Do, Eda Malaj, Roger H. Reeves

Genome Res. 2000 Oct; 10(10): 1463–1467. doi: 10.1101/gr.146600

PMCID:: PMC310982

Abstract Article PDF–1.7M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 30876316.

GenePaint.org: an atlas of gene expression patterns in the mouse embryo

Axel Visel, Christina Thaller, Gregor Eichele

Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029

PMCID:: PMC308763

Abstract Article PDF–253K

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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