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Items: 1 to 20 of 24

1.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
2.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
3.
Csk-associated adaptor PAG inhibits effector T cell activation in cooperation with phosphatase PTPN22 and Dok adaptors
Dominique Davidson, Ming-Chao Zhong, Pier Paolo Pandolfi, Silvia Bolland, Ramnik J. Xavier, Brian Seed, Xin Li, Hua Gu, André Veillette
Cell Rep. Author manuscript; available in PMC 2017 Dec 6.
Published in final edited form as: Cell Rep. 2016 Dec 6; 17(10): 2776–2788. doi: 10.1016/j.celrep.2016.11.035
PMCID:
PMC5656005
AbstractArticlePDF–2.4M
4.
Differential expression of HDAC and HAT genes in atrophying skeletal muscle
Adam W. Beharry, Andrew R. Judge
Muscle Nerve. Author manuscript; available in PMC 2016 Dec 1.
Published in final edited form as: Muscle Nerve. 2015 Dec; 52(6): 1098–1101. Published online 2015 Oct 10. doi: 10.1002/mus.24912
PMCID:
PMC4715560
AbstractArticlePDF–242K
5.
The Interleukin-2-mTORc1 Axis Defines the Reciprocal Signaling, Differentiation, and Metabolism of T Helper 1 and Follicular B Helper T Cells
John P. Ray, Matthew M. Staron, Justin A. Shyer, Ping-Chih Ho, Heather D. Marshall, Simon M. Gray, Brian J. Laidlaw, Koichi Araki, Rafi Ahmed, Susan M. Kaech, Joe Craft
Immunity. Author manuscript; available in PMC 2016 Oct 20.
Published in final edited form as: Immunity. 2015 Oct 20; 43(4): 690–702. Published online 2015 Sep 22. doi: 10.1016/j.immuni.2015.08.017
PMCID:
PMC4618086
AbstractArticlePDF–2.2M
6.
Transmembrane Adaptor Protein PAG/CBP Is Involved in both Positive and Negative Regulation of Mast Cell Signaling
Lubica Draberova, Viktor Bugajev, Lucie Potuckova, Ivana Halova, Monika Bambouskova, Iva Polakovicova, Ramnik J. Xavier, Brian Seed, Petr Draber
Mol Cell Biol. 2014 Dec; 34(23): 4285–4300. doi: 10.1128/MCB.00983-14
PMCID:
PMC4248753
AbstractArticlePDF–2.4M
7.
Roles of Raft-Anchored Adaptor Cbp/PAG1 in Spatial Regulation of c-Src Kinase
Takashi Saitou, Kentaro Kajiwara, Chitose Oneyama, Takashi Suzuki, Masato Okada
PLoS One. 2014; 9(3): e93470. Published online 2014 Mar 27. doi: 10.1371/journal.pone.0093470
PMCID:
PMC3968143
AbstractArticlePDF–1.3M
8.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
9.
The Transcriptional Coactivator Cbp Regulates Self-Renewal and Differentiation in Adult Hematopoietic Stem Cells
Wai-In Chan, Rebecca L. Hannah, Mark A. Dawson, Clare Pridans, Donna Foster, Anagha Joshi, Berthold Göttgens, Jan M. Van Deursen, Brian J. P. Huntly
Mol Cell Biol. 2011 Dec; 31(24): 5046–5060. doi: 10.1128/MCB.05830-11
PMCID:
PMC3233028
AbstractArticlePDF–3.6M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Phosphoprotein Associated with Glycosphingolipid-Enriched Microdomains Differentially Modulates Src Kinase Activity in Brain Maturation
Sabine Lindquist, Diana Karitkina, Kristina Langnaese, Anita Posevitz-Fejfar, Burkhart Schraven, Ramnik Xavier, Brian Seed, Jonathan A. Lindquist
PLoS One. 2011; 6(9): e23978. Published online 2011 Sep 6. doi: 10.1371/journal.pone.0023978
PMCID:
PMC3167820
AbstractArticlePDF–2.0M
12.
Down-regulation of the Tumor Suppressor C-terminal Src Kinase (Csk)-binding Protein (Cbp)/PAG1 Is Mediated by Epigenetic Histone Modifications via the Mitogen-activated Protein Kinase (MAPK)/Phosphatidylinositol 3-Kinase (PI3K) Pathway
Kei Suzuki, Chitose Oneyama, Hironobu Kimura, Shoji Tajima, Masato Okada
J Biol Chem. 2011 May 6; 286(18): 15698–15706. Published online 2011 Mar 9. doi: 10.1074/jbc.M110.195362
PMCID:
PMC3091178
AbstractArticlePDF–1.6M
13.
MAP3K4/CBP Regulated H2B Acetylation Controls Epithelial-Mesenchymal Transition in Trophoblast Stem Cells
Amy N. Abell, Nicole Vincent Jordan, Weichun Huang, Aleix Prat, Alicia A. Midland, Nancy L. Johnson, Deborah A. Granger, Piotr A. Mieczkowski, Charles M. Perou, Shawn M. Gomez, Leping Li, Gary L. Johnson
Cell Stem Cell. Author manuscript; available in PMC 2012 May 6.
Published in final edited form as: Cell Stem Cell. 2011 May 6; 8(5): 525–537. doi: 10.1016/j.stem.2011.03.008
PMCID:
PMC3091002
AbstractArticlePDF–3.3M
14.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
15.
The transmembrane protein CBP plays a role in transiently anchoring small clusters of Thy-1, a GPI-anchored protein, to the cytoskeleton
Yun Chen, Laurence Veracini, Christine Benistant, Ken Jacobson
J Cell Sci. 2009 Nov 1; 122(21): 3966–3972. Published online 2009 Oct 13. doi: 10.1242/jcs.049346
PMCID:
PMC2773195
AbstractArticle
16.
The Csk-binding protein PAG regulates PDGF-induced Src mitogenic signaling via GM1
Laurence Veracini, Valérie Simon, Véronique Richard, Burkhart Schraven, Vaclav Horejsi, Serge Roche, Christine Benistant
J Cell Biol. 2008 Aug 11; 182(3): 603–614. doi: 10.1083/jcb.200705102
PMCID:
PMC2500143
AbstractArticlePDF–2.6M
17.
Phosphoprotein Associated with Glycosphingolipid-Enriched Microdomains (Pag), a Novel Ubiquitously Expressed Transmembrane Adaptor Protein, Binds the Protein Tyrosine Kinase Csk and Is Involved in Regulation of T Cell Activation
Tomás̆ Brdic̆ka, Dagmar Pavlis̆tová, Albrecht Leo, Eddy Bruyns, Vladimír Kor̆ínek, Pavla Angelisová, Jeanette Scherer, Andrej Shevchenko, Anna Shevchenko, Ivan Hilgert, Jan C̆erný, Karel Drbal, Yasuhiro Kuramitsu, Birgit Kornacker, Václav Hor̆ejs̆í, Burkhart Schraven
J Exp Med. 2000 May 1; 191(9): 1591–1604. doi: 10.1084/jem.191.9.1591
PMCID:
PMC2213442
AbstractArticlePDF–429K
18.
The Ubiquitously Expressed Csk Adaptor Protein Cbp Is Dispensable for Embryogenesis and T-Cell Development and Function
Marc-Werner Dobenecker, Christian Schmedt, Masato Okada, Alexander Tarakhovsky
Mol Cell Biol. 2005 Dec; 25(23): 10533–10542. doi: 10.1128/MCB.25.23.10533-10542.2005
PMCID:
PMC1291250
AbstractArticlePDF–533K
19.
Cbp Deficiency Alters Csk Localization in Lipid Rafts but Does Not Affect T-Cell Development
Shengli Xu, Jianxin Huo, Joy En-Lin Tan, Kong-Peng Lam
Mol Cell Biol. 2005 Oct; 25(19): 8486–8495. doi: 10.1128/MCB.25.19.8486-8495.2005
PMCID:
PMC1265734
AbstractArticlePDF–494K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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