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Items: 1 to 20 of 27

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
3.
Single‐cell RNA‐Seq reveals a highly coordinated transcriptional program in mouse germ cells during primordial follicle formation
Yuanlin He, Qiuzhen Chen, Juncheng Dai, Yiqiang Cui, Chi Zhang, Xidong Wen, Jiazhao Li, Yue Xiao, Xiaoxu Peng, Mingxi Liu, Bin Shen, Jiahao Sha, Zhibin Hu, Jing Li, Wenjie Shu
Aging Cell. 2021 Jul; 20(7): e13424. Published online 2021 Jun 26. doi: 10.1111/acel.13424
PMCID:
PMC8282241
AbstractArticlePDF–3.6M
4.
The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation
Jeannine M. Basta, Ajeet P. Singh, Lynn Robbins, Lisa Stout, Michelle Pherson, Michael Rauchman
Dev Biol. Author manuscript; available in PMC 2020 Sep 27.
Published in final edited form as: Dev Biol. 2020 Aug 15; 464(2): 176–187. Published online 2020 Jun 3. doi: 10.1016/j.ydbio.2020.05.008
PMCID:
PMC7520014
AbstractArticlePDF–2.6M
5.
HRP2–DPF3a–BAF complex coordinates histone modification and chromatin remodeling to regulate myogenic gene transcription
Xu Zhu, Bingxue Lan, Xianfu Yi, Chaoran He, Lin Dang, Xingquan Zhou, Yumei Lu, Yongzhan Sun, Zhiheng Liu, Xue Bai, Kai Zhang, Bing Li, Mulin Jun Li, Yupeng Chen, Lirong Zhang
Nucleic Acids Res. 2020 Jul 9; 48(12): 6563–6582. Published online 2020 May 27. doi: 10.1093/nar/gkaa441
PMCID:
PMC7337902
AbstractArticlePDF–9.5M
6.
The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1
Gina E. Elsen, Francesco Bedogni, Rebecca D. Hodge, Theo K. Bammler, James W. MacDonald, Susan Lindtner, John L. R. Rubenstein, Robert F. Hevner
Front Neurosci. 2018; 12: 571. Published online 2018 Aug 22. doi: 10.3389/fnins.2018.00571
PMCID:
PMC6113890
AbstractArticlePDF–4.8M
7.
EBF2 transcriptionally regulates brown adipogenesis via the histone reader DPF3 and the BAF chromatin remodeling complex
Suzanne N. Shapira, Hee-Woong Lim, Sona Rajakumari, Alexander P. Sakers, Jeff Ishibashi, Matthew J. Harms, Kyoung-Jae Won, Patrick Seale
Genes Dev. 2017 Apr 1; 31(7): 660–673. doi: 10.1101/gad.294405.116
PMCID:
PMC5411707
AbstractArticlePDF–932K
8.
Fibroblast growth factor receptor–Frs2α signaling is critical for nephron progenitors
Valeria Di Giovanni, Kenneth A. Walker, Daniel Bushnell, Caitlin Schaefer, Sunder Sims-Lucas, Pawan Puri, Carlton M. Bates
Dev Biol. Author manuscript; available in PMC 2016 Apr 1.
Published in final edited form as: Dev Biol. 2015 Apr 1; 400(1): 82–93. Published online 2015 Jan 30. doi: 10.1016/j.ydbio.2015.01.018
PMCID:
PMC4361332
AbstractArticlePDF–3.3M
9.
Profiling, Bioinformatic, and Functional Data on the Developing Olfactory/GnRH System Reveal Cellular and Molecular Pathways Essential for This Process and Potentially Relevant for the Kallmann Syndrome
Giulia Garaffo, Paolo Provero, Ivan Molineris, Patrizia Pinciroli, Clelia Peano, Cristina Battaglia, Daniela Tomaiuolo, Talya Etzion, Yoav Gothilf, Massimo Santoro, Giorgio R. Merlo
Front Endocrinol (Lausanne) 2013; 4: 203. Prepublished online 2013 Dec 9. Published online 2013 Dec 31. doi: 10.3389/fendo.2013.00203
PMCID:
PMC3876029
AbstractArticlePDF–5.4M
10.
Kinetic Analysis of npBAF to nBAF Switching Reveals Exchange of SS18 with CREST and Integration with Neural Developmental Pathways
Brett T. Staahl, Jiong Tang, Wei Wu, Alfred Sun, Aaron D. Gitler, Andrew S. Yoo, Gerald R. Crabtree
J Neurosci. 2013 Jun 19; 33(25): 10348–10361. doi: 10.1523/JNEUROSCI.1258-13.2013
PMCID:
PMC3685834
AbstractArticlePDF–3.6M
11.
mSWI/SNF (BAF) Complexes Facilitate Decatentation of DNA by Topoisomerase IIa
Emily C. Dykhuizen, Diana C. Hargreaves, Erik Miller, Kairong Cui, Andrey Korshunov, Marcel Kool, Stefan Pfister, Yoon-Jae Cho, Keji Zhao, Gerald R. Crabtree
Nature. Author manuscript; available in PMC 2013 Nov 30.
Published in final edited form as: Nature. 2013 May 30; 497(7451): 624–627. Published online 2013 May 22. doi: 10.1038/nature12146
PMCID:
PMC3668793
AbstractArticlePDF–1.6M
12.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
13.
A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract
Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith
Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130
PMCID:
PMC3439845
AbstractArticlePDF–1.4M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
16.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
17.
High-resolution gene expression analysis of the developing mouse kidney defines novel cellular compartments within the nephron progenitor population
Joshua W. Mugford, Jing Yu, Akio Kobayashi, Andrew P. McMahon
Dev Biol. Author manuscript; available in PMC 2010 Sep 15.
Published in final edited form as: Dev Biol. 2009 Sep 15; 333(2): 312–323. Published online 2009 Jul 8. doi: 10.1016/j.ydbio.2009.06.043
PMCID:
PMC2748313
AbstractArticlePDF–5.4M
18.
An Essential Switch in Subunit Composition of a Chromatin Remodeling Complex during Neural Development
Julie Lessard, Jiang I. Wu, Jeffrey A. Ranish, Mimi Wan, Monte M. Winslow, Brett T. Staahl, Hai Wu, Ruedi Aebersold, Isabella A. Graef, Gerald R. Crabtree
Neuron. Author manuscript; available in PMC 2009 Apr 27.
Published in final edited form as: Neuron. 2007 Jul 19; 55(2): 201–215. doi: 10.1016/j.neuron.2007.06.019
PMCID:
PMC2674110
AbstractArticlePDF–6.2M
19.
Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex
Martin Lange, Bogac Kaynak, Ulrike B. Forster, Martje Tönjes, Jenny J. Fischer, Christina Grimm, Jenny Schlesinger, Steffen Just, Ilona Dunkel, Tammo Krueger, Siegrun Mebus, Hans Lehrach, Rudi Lurz, Johan Gobom, Wolfgang Rottbauer, Salim Abdelilah-Seyfried, Silke Sperling
Genes Dev. 2008 Sep 1; 22(17): 2370–2384. doi: 10.1101/gad.471408
PMCID:
PMC2532927
AbstractArticlePDF–999K
20.
Mammalian SWI/SNF complexes facilitate DNA double-strand break repair by promoting γ-H2AX induction
Ji-Hye Park, Eun-Jung Park, Han-Sae Lee, So Jung Kim, Shin-Kyoung Hur, Anthony N Imbalzano, Jongbum Kwon
EMBO J. 2006 Sep 6; 25(17): 3986–3997. Published online 2006 Aug 24. doi: 10.1038/sj.emboj.7601291
PMCID:
PMC1560357
AbstractArticlePDF–681K

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