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Select item 101549991.

Dynamic 3D Chromatin Architecture Contributes to Enhancer Specificity and Limb Morphogenesis

Bjørt K. Kragesteen, Malte Spielmann, Christina Paliou, Verena Heinrich, Robert Schöpflin, Andrea Esposito, Carlo Annunziatella, Simona Bianco, Andrea M. Chiariello, Ivana Jerković, Izabela Harabula, Philine Guckelberger, Michael Pechstein, Lars Wittler, Wing-Lee Chan, Martin Franke, Darío G. Lupiáñez, Katerina Kraft, Bernd Timmermann, Martin Vingron, Axel Visel, Mario Nicodemi, Stefan Mundlos, Guillaume Andrey

Nat Genet. Author manuscript; available in PMC 2023 May 3.

Published in final edited form as: Nat Genet. 2018 Oct; 50(10): 1463–1473. Published online 2018 Sep 27. doi: 10.1038/s41588-018-0221-x

PMCID:: PMC10154999

Abstract Article PDF–4.1M

Select item 89401772.

Control of spinal motor neuron terminal differentiation through sustained Hoxc8 gene activity

Catarina Catela, Yihan Chen, Yifei Weng, Kailong Wen, Paschalis Kratsios

eLife. 2022; 11: e70766. Published online 2022 Mar 22. doi: 10.7554/eLife.70766

PMCID:: PMC8940177

Abstract Article PDF–6.0M

Select item 87657553.

PRC1 sustains the integrity of neural fate in the absence of PRC2 function

Ayana Sawai, Sarah Pfennig, Milica Bulajić, Alexander Miller, Alireza Khodadadi-Jamayran, Esteban O Mazzoni, Jeremy S Dasen

eLife. 2022; 11: e72769. Published online 2022 Jan 7. doi: 10.7554/eLife.72769

PMCID:: PMC8765755

Abstract Article PDF–7.5M

Select item 85563484.

Fli1 Promotes Vascular Morphogenesis by Regulating Endothelial Potential of Multipotent Myogenic Progenitors

Anwarul Ferdous, Sarvjeet Singh, Yuxuan Luo, Md. J. Abedin, Nan Jiang, Cameron E. Perry, Bret M. Evers, Thomas G. Gillette, Michael Kyba, Maria Trojanowska, Joseph A. Hill

Circ Res. Author manuscript; available in PMC 2022 Oct 29.

Published in final edited form as: Circ Res. 2021 Oct 29; 129(10): 949–964. Published online 2021 Sep 21. doi: 10.1161/CIRCRESAHA.121.318986

PMCID:: PMC8556348

Abstract Article PDF–1.9M

Select item 83856165.

HOXC10 Suppresses Browning to Maintain White Adipocyte Identity

H.Y. Angeline Tan, M.F. Michelle Sim, Shi-Xiong Tan, Yvonne Ng, Sin Yee Gan, Hongyu Li, Suat Peng Neo, Jayantha Gunaratne, Feng Xu, Weiping Han

Diabetes. 2021 Aug; 70(8): 1654–1663. Published online 2021 May 14. doi: 10.2337/db21-0114

PMCID:: PMC8385616

Abstract Article PDF–1.5M

Select item 77100206.

Differential abilities to engage inaccessible chromatin diversify vertebrate Hox binding patterns

Milica Bulajić, Divyanshi Srivastava, Jeremy S. Dasen, Hynek Wichterle, Shaun Mahony, Esteban O. Mazzoni

Development. 2020 Nov 15; 147(22): dev194761. Published online 2020 Nov 23. doi: 10.1242/dev.194761

PMCID:: PMC7710020

Abstract Article

Select item 77046667.

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster

Yoshiki Higashijima, Nao Nagai, Masamichi Yamamoto, Taro Kitazawa, Yumiko K. Kawamura, Akashi Taguchi, Natsuko Nakada, Masaomi Nangaku, Tetsushi Furukawa, Hiroyuki Aburatani, Hiroki Kurihara, Youichiro Wada, Yasuharu Kanki

Commun Biol. 2020; 3: 725. Published online 2020 Nov 30. doi: 10.1038/s42003-020-01456-5

PMCID:: PMC7704666

Abstract Article PDF–1.3M

Select item 73241598.

A Tgfbr1/Snai1-dependent developmental module at the core of vertebrate axial elongation

André Dias, Anastasiia Lozovska, Filip J Wymeersch, Ana Nóvoa, Anahi Binagui-Casas, Daniel Sobral, Gabriel G Martins, Valerie Wilson, Moises Mallo

eLife. 2020; 9: e56615. Published online 2020 Jun 29. doi: 10.7554/eLife.56615

PMCID:: PMC7324159

Abstract Article PDF–16M

Select item 72599519.

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates

Tempei Sato, Kensuke Kataoka, Yoshiaki Ito, Shigetoshi Yokoyama, Masafumi Inui, Masaki Mori, Satoru Takahashi, Keiichi Akita, Shuji Takada, Hiroe Ueno-Kudoh, Hiroshi Asahara

eLife. 2020; 9: e53608. Published online 2020 May 29. doi: 10.7554/eLife.53608

PMCID:: PMC7259951

Abstract Article PDF–5.5M

Select item 719827910.

Development of the Proximal-Anterior Skeletal Elements in the Mouse Hindlimb Is Regulated by a Transcriptional and Signaling Network Controlled by Sall4

Katherine Q. Chen, Naoyuki Tahara, Aaron Anderson, Hiroko Kawakami, Sho Kawakami, Ryuichi Nishinakamura, Pier Paolo Pandolfi, Yasuhiko Kawakami

Genetics. 2020 May; 215(1): 129–141. Published online 2020 Mar 10. doi: 10.1534/genetics.120.303069

PMCID:: PMC7198279

Abstract Article PDF–2.0M

Select item 672422111.

The emergent landscape of the mouse gut endoderm at single-cell resolution

Sonja Nowotschin, Manu Setty, Ying-Yi Kuo, Vincent Liu, Vidur Garg, Roshan Sharma, Claire S. Simon, Nestor Saiz, Rui Gardner, Stéphane C. Boutet, Deanna M. Church, Pamela A. Hoodless, Anna-Katerina Hadjantonakis, Dana Pe’er

Nature. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Nature. 2019 May; 569(7756): 361–367. Published online 2019 Apr 8. doi: 10.1038/s41586-019-1127-1

PMCID:: PMC6724221

Abstract Article PDF–6.5M

Select item 651430512.

Islet1 regulates establishment of the posterior hindlimb field upstream of the Hand2-Shh morphoregulatory gene network in mouse embryos

Junji Itou, Hiroko Kawakami, Thu Quach, Marco Osterwalder, Sylvia M. Evans, Rolf Zeller, Yasuhiko Kawakami

Development. 2012 May 1; 139(9): 1620–1629. Published online 2012 Apr 3. doi: 10.1242/dev.073056

PMCID:: PMC6514305

Abstract Article

Select item 586818113.

CITGeneDB: a comprehensive database of human and mouse genes enhancing or suppressing cold-induced thermogenesis validated by perturbation experiments in mice

Jin Li, Su-Ping Deng, Gang Wei, Peng Yu

Database (Oxford) 2018; 2018: bay012. Published online 2018 Mar 23. doi: 10.1093/database/bay012

PMCID:: PMC5868181

Abstract Article PDF–653K

Select item 533655714.

HOXC10 suppresses browning of white adipose tissues

Yvonne Ng, Shi-Xiong Tan, Sook Yoong Chia, Hwee Yim Angeline Tan, Sin Yee Gun, Lei Sun, Wanjin Hong, Weiping Han

Exp Mol Med. 2017 Feb; 49(2): e292. Published online 2017 Feb 10. doi: 10.1038/emm.2016.144

PMCID:: PMC5336557

Abstract Article PDF–2.7M

Select item 447536115.

Anterior migration of lateral plate mesodermal cells during embryogenesis of the pufferfishTakifugu niphobles: insight into the rostral positioning of pelvic fins

Mikiko Tanaka, Reiko Yu, Daisuke Kurokawa

J Anat. 2015 Jul; 227(1): 81–88. Published online 2015 May 28. doi: 10.1111/joa.12324

PMCID:: PMC4475361

Abstract Article PDF–1.8M

Select item 444565016.

Ribosome mediated specificity in Hox mRNA translation and vertebrate tissue patterning

Nadya Kondrashov, Aya Pusic, Craig R. Stumpf, Kunihiko Shimizu, Andrew C. Hsieh, Junko Ishijima, Toshihiko Shiroishi, Maria Barna

Cell. Author manuscript; available in PMC 2015 May 27.

Published in final edited form as: Cell. 2011 Apr 29; 145(3): 383–397. doi: 10.1016/j.cell.2011.03.028

PMCID:: PMC4445650

Abstract Article PDF–1.5M

Select item 441334517.

Sall4-Gli3 system in early limb progenitors is essential for the development of limb skeletal elements

Ryutaro Akiyama, Hiroko Kawakami, Julia Wong, Isao Oishi, Ryuichi Nishinakamura, Yasuhiko Kawakami

Proc Natl Acad Sci U S A. 2015 Apr 21; 112(16): 5075–5080. Published online 2015 Apr 6. doi: 10.1073/pnas.1421949112

PMCID:: PMC4413345

Abstract Article PDF–1.1M

Select item 431955918.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 403829519.

Targeted disruption of Hotair leads to homeotic transformation and gene de-repression

Lingjie Li, Bo Liu, Orly L. Wapinski, Miao-Chih Tsai, Kun Qu, Jiajing Zhang, Jeff C. Carlson, Meihong Lin, Fengqin Fang, Rajnish A. Gupta, Jill A. Helms, Howard Y. Chang

Cell Rep. Author manuscript; available in PMC 2014 May 29.

Published in final edited form as: Cell Rep. 2013 Oct 17; 5(1): 3–12. Published online 2013 Sep 26. doi: 10.1016/j.celrep.2013.09.003

PMCID:: PMC4038295

Abstract Article PDF–1.6M

Select item 396118520.

A Combination of Activation and Repression by a Colinear Hox Code Controls Forelimb-Restricted Expression of Tbx5 and Reveals Hox Protein Specificity

Satoko Nishimoto, Carolina Minguillon, Sophie Wood, Malcolm P. O. Logan

PLoS Genet. 2014 Mar; 10(3): e1004245. Published online 2014 Mar 20. doi: 10.1371/journal.pgen.1004245

PMCID:: PMC3961185

Abstract Article PDF–13M

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