PMC Links for GEO Profiles (Select 111946010) - PMC

Select item 103221501.

Defining function of wild-type and three patient-specific TP53 mutations in a zebrafish model of embryonal rhabdomyosarcoma

Jiangfei Chen, Kunal Baxi, Amanda E Lipsitt, Nicole Rae Hensch, Long Wang, Prethish Sreenivas, Paulomi Modi, Xiang Ru Zhao, Antoine Baudin, Daniel G Robledo, Abhik Bandyopadhyay, Aaron Sugalski, Anil K Challa, Dias Kurmashev, Andrea R Gilbert, Gail E Tomlinson, Peter Houghton, Yidong Chen, Madeline N Hayes, Eleanor Y Chen, David S Libich, Myron S Ignatius

eLife. 2023; 12: e68221. Published online 2023 Jun 2. doi: 10.7554/eLife.68221

PMCID:: PMC10322150

Abstract Article PDF–14M

Select item 91726322.

MITF deficiency accelerates GNAQ-driven uveal melanoma

Grace B. Phelps, Hannah R. Hagen, Adam Amsterdam, Jacqueline A. Lees

Proc Natl Acad Sci U S A. 2022 May 10; 119(19): e2107006119. Published online 2022 May 5. doi: 10.1073/pnas.2107006119

PMCID:: PMC9172632

Abstract Article PDF–2.0M

Select item 85690183.

Smad4 controls signaling robustness and morphogenesis by differentially contributing to the Nodal and BMP pathways

Luca Guglielmi, Claire Heliot, Sunil Kumar, Yuriy Alexandrov, Ilaria Gori, Foteini Papaleonidopoulou, Christopher Barrington, Philip East, Andrew D. Economou, Paul M. W. French, James McGinty, Caroline S. Hill

Nat Commun. 2021; 12: 6374. Published online 2021 Nov 4. doi: 10.1038/s41467-021-26486-3

PMCID:: PMC8569018

Abstract Article PDF–15M

Select item 57916624.

Long-Range Signaling Activation and Local Inhibition Separate the Mesoderm and Endoderm Lineages

Antonius L. van Boxtel, Andrew D. Economou, Claire Heliot, Caroline S. Hill

Dev Cell. 2018 Jan 22; 44(2): 179–191.e5. doi: 10.1016/j.devcel.2017.11.021

PMCID:: PMC5791662

Abstract Article PDF–5.4M

Select item 55630755.

The NOTCH1/SNAIL1/MEF2C Pathway Regulates Growth and Self-Renewal in Embryonal Rhabdomyosarcoma

Myron S. Ignatius, Madeline N. Hayes, Riadh Lobbardi, Eleanor Y. Chen, Karin M. McCarthy, Prethish Sreenivas, Zainab Motala, Adam D. Durbin, Aleksey Molodtsov, Sophia Reeder, Alexander Jin, Sivasish Sindiri, Brian C. Beleyea, Deepak Bhere, Matthew S. Alexander, Khalid Shah, Charles Keller, Corinne M. Linardic, Petur G. Nielsen, David Malkin, Javed Khan, David M. Langenau

Cell Rep. Author manuscript; available in PMC 2017 Aug 19.

Published in final edited form as: Cell Rep. 2017 Jun 13; 19(11): 2304–2318. doi: 10.1016/j.celrep.2017.05.061

PMCID:: PMC5563075

Abstract Article PDF–1.6M

Select item 54943056.

In Vivo Regulation of the Zebrafish Endoderm Progenitor Niche by T-Box Transcription Factors

Andrew C. Nelson, Stephen J. Cutty, Saule N. Gasiunas, Isabella Deplae, Derek L. Stemple, Fiona C. Wardle

Cell Rep. 2017 Jun 27; 19(13): 2782–2795. Published online 2017 Jun 27. doi: 10.1016/j.celrep.2017.06.011

PMCID:: PMC5494305

Abstract Article

Select item 48707327.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 44303698.

Spatial reconstruction of single-cell gene expression

Rahul Satija, Jeffrey A. Farrell, David Gennert, Alexander F. Schier, Aviv Regev

Nat Biotechnol. Author manuscript; available in PMC 2015 Nov 1.

Published in final edited form as: Nat Biotechnol. 2015 May; 33(5): 495–502. Published online 2015 Apr 13. doi: 10.1038/nbt.3192

PMCID:: PMC4430369

Abstract Article PDF–849K

Select item 39861659.

Gene-expression analysis of hair cell regeneration in the zebrafish lateral line

Linjia Jiang, Andres Romero-Carvajal, Jeff S. Haug, Christopher W. Seidel, Tatjana Piotrowski

Proc Natl Acad Sci U S A. 2014 Apr 8; 111(14): E1383–E1392. Published online 2014 Mar 27. doi: 10.1073/pnas.1402898111

Correction in:: Proc Natl Acad Sci U S A. 2015 Nov 3; 112(44): E6080.

PMCID:: PMC3986165

Abstract Article PDF–1.3M

Select item 365355710.

A novel chemical screening strategy in zebrafish identifies common pathways in embryogenesis and rhabdomyosarcoma development

Xiuning Le, Emily K. Pugach, Simone Hettmer, Narie Y. Storer, Jianing Liu, Airon A. Wills, Antony DiBiase, Eleanor Y. Chen, Myron S. Ignatius, Kenneth D. Poss, Amy J. Wagers, David M. Langenau, Leonard I. Zon

Development. 2013 Jun 1; 140(11): 2354–2364. doi: 10.1242/dev.088427