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Items: 20

1.
Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
Filip Mihalič, Leandro Simonetti, Girolamo Giudice, Marie Rubin Sander, Richard Lindqvist, Marie Berit Akpiroro Peters, Caroline Benz, Eszter Kassa, Dilip Badgujar, Raviteja Inturi, Muhammad Ali, Izabella Krystkowiak, Ahmed Sayadi, Eva Andersson, Hanna Aronsson, Ola Söderberg, Doreen Dobritzsch, Evangelia Petsalaki, Anna K. Överby, Per Jemth, Norman E. Davey, Ylva Ivarsson
Nat Commun. 2023; 14: 2409. Published online 2023 Apr 26. doi: 10.1038/s41467-023-38015-5
PMCID:
PMC10132805
AbstractArticlePDF–4.2M
2.
Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome
Caroline Benz, Muhammad Ali, Izabella Krystkowiak, Leandro Simonetti, Ahmed Sayadi, Filip Mihalic, Johanna Kliche, Eva Andersson, Per Jemth, Norman E Davey, Ylva Ivarsson
Mol Syst Biol. 2022 Jan; 18(1): e10584. Published online 2022 Jan 19. doi: 10.15252/msb.202110584
PMCID:
PMC8769072
AbstractArticlePDF–2.9M
3.
Targeted next-generation sequencing panel screening of 668 Chinese patients with non-obstructive azoospermia
Miao An, Yidong Liu, Ming Zhang, Kai Hu, Yan Jin, Shiran Xu, Hongxiang Wang, Mujun Lu
J Assist Reprod Genet. 2021 Aug; 38(8): 1997–2005. Published online 2021 Mar 16. doi: 10.1007/s10815-021-02154-9
PMCID:
PMC8417191
AbstractArticlePDF–739K
4.
Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases
Marija Buljan, Rodolfo Ciuffa, Audrey van Drogen, Anton Vichalkovski, Martin Mehnert, George Rosenberger, Sohyon Lee, Markku Varjosalo, Lucia Espona Pernas, Vincent Spegg, Berend Snijder, Ruedi Aebersold, Matthias Gstaiger
Mol Cell. 2020 Aug 6; 79(3): 504–520.e9. doi: 10.1016/j.molcel.2020.07.001
PMCID:
PMC7427327
AbstractArticle
5.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
6.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
7.
Expression analysis of genes encoding TEX11, TEX12, TEX14 and TEX15 in testis tissues of men with non-obstructive azoospermia
Parnaz Borjian Boroujeni, Marjan Sabbaghian, Mehdi Totonchi, Niloofar Sodeifi, Homa Sarkardeh, Azam Samadian, Mohammad Ali Sadighi-Gilani, Hamid Gourabi
JBRA Assist Reprod. 2018 Jul-Sep; 22(3): 185–192. doi: 10.5935/1518-0557.20180030
PMCID:
PMC6106636
AbstractArticlePDF–2.9M
8.
Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells
Hee Jung Kim, Jungbin Yoon, Atsushi Matsuura, Jung-Hyun Na, Won-Kyu Lee, Hyunook Kim, Ji Woong Choi, Ji Eun Park, Sung-Jean Park, Kyung Tae Kim, Rakwoo Chang, Byung Il Lee, Yeon Gyu Yu, Yeon-Kyun Shin, Cherlhyun Jeong, Kunsoo Rhee, Hyung Ho Lee
Proc Natl Acad Sci U S A. 2015 Oct 6; 112(40): 12372–12377. Published online 2015 Sep 21. doi: 10.1073/pnas.1418606112
PMCID:
PMC4603477
AbstractArticlePDF–1.5M
9.
The oncogenic STP axis promotes triple-negative breast cancer via degradation of the REST tumor suppressor
Kristen L. Karlin, Gourish Mondal, Jessica K. Hartman, Siddhartha Tyagi, Sarah J. Kurley, Chris S. Bland, Tiffany Y.T. Hsu, Alexander Renwick, Justin E. Fang, Ilenia Migliaccio, Celetta Callaway, Amritha Nair, Rocio Dominguez-Vidana, Don X. Nguyen, C. Kent Osborne, Rachel Schiff, Li-Yuan Yu-Lee, Sung Y. Jung, Dean P. Edwards, Susan G. Hilsenbeck, Jeffrey M. Rosen, Xiang Zhang, Chad A. Shaw, Fergus J. Couch, Thomas F. Westbrook
Cell Rep. Author manuscript; available in PMC 2015 Nov 20.
Published in final edited form as: Cell Rep. 2014 Nov 20; 9(4): 1318–1332. Published online 2014 Nov 6. doi: 10.1016/j.celrep.2014.10.011
PMCID:
PMC4427000
AbstractArticlePDF–2.5M
10.
Novel loci affecting iron homeostasis and their effects in individuals at risk for hemochromatosis
Beben Benyamin, Tonu Esko, Janina S Ried, Aparna Radhakrishnan, Sita H Vermeulen, Michela Traglia, Martin Gögele, Denise Anderson, Linda Broer, Clara Podmore, Jian’an Luan, Zoltan Kutalik, Serena Sanna, Peter van der Meer, Toshiko Tanaka, Fudi Wang, Harm-Jan Westra, Lude Franke, Evelin Mihailov, Lili Milani, Jonas Häldin, Juliane Winkelmann, Thomas Meitinger, Joachim Thiery, Annette Peters, Melanie Waldenberger, Augusto Rendon, Jennifer Jolley, Jennifer Sambrook, Lambertus A Kiemeney, Fred C Sweep, Cinzia F Sala, Christine Schwienbacher, Irene Pichler, Jennie Hui, Ayse Demirkan, Aaron Isaacs, Najaf Amin, Maristella Steri, Gérard Waeber, Niek Verweij, Joseph E Powell, Dale R Nyholt, Andrew C Heath, Pamela AF Madden, Peter M Visscher, Margaret J Wright, Grant W Montgomery, Nicholas G Martin, Dena Hernandez, Stefania Bandinelli, Pim van der Harst, Manuela Uda, Peter Vollenweider, Robert A Scott, Claudia Langenberg, Nicholas J Wareham, InterAct Consortium, Cornelia van Duijn, John Beilby, Peter P Pramstaller, Andrew A Hicks, Willem H Ouwehand, Konrad Oexle, Christian Gieger, Andres Metspalu, Clara Camaschella, Daniela Toniolo, Dorine W Swinkels, John B Whitfield
Nat Commun. Author manuscript; available in PMC 2015 Apr 29.
Published in final edited form as: Nat Commun. 2014; 5: 4926. Published online 2014 Oct 29. doi: 10.1038/ncomms5926
Correction in:
Nat Commun. 2015 Mar 30; 6: 6542.
PMCID:
PMC4215164
AbstractArticlePDF–659K
11.
Genome-wide association study of primary tooth eruption identifies pleiotropic loci associated with height and craniofacial distances
Ghazaleh Fatemifar, Clive J. Hoggart, Lavinia Paternoster, John P. Kemp, Inga Prokopenko, Momoko Horikoshi, Victoria J. Wright, Jon H. Tobias, Stephen Richmond, Alexei I. Zhurov, Arshed M. Toma, Anneli Pouta, Anja Taanila, Kirsi Sipila, Raija Lähdesmäki, Demetris Pillas, Frank Geller, Bjarke Feenstra, Mads Melbye, Ellen A. Nohr, Susan M. Ring, Beate St Pourcain, Nicholas J. Timpson, George Davey Smith, Marjo-Riitta Jarvelin, David M. Evans
Hum Mol Genet. 2013 Sep 15; 22(18): 3807–3817. Published online 2013 May 23. doi: 10.1093/hmg/ddt231
PMCID:
PMC3749866
AbstractArticlePDF–277K
12.
Meta-analysis identifies four new loci associated with testicular germ cell tumor
Charles C. Chung, Peter A. Kanetsky, Zhaoming Wang, Michelle A. T. Hildebrandt, Roelof Koster, Rolf I. Skotheim, Christian P. Kratz, Clare Turnbull, Victoria K. Cortessis, Anne C. Bakken, D. Timothy Bishop, Michael B. Cook, R. Loren Erickson, Sophie D. Fosså, Kevin B. Jacobs, Larissa A. Korde, Sigrid M. Kraggerud, Ragnhild A. Lothe, Jennifer T. Loud, Nazneen Rahman, Eila C. Skinner, Duncan C. Thomas, Xifeng Wu, Meredith Yeager, Fredrick R. Schumacher, Mark H. Greene, Stephen M. Schwartz, Katherine A. McGlynn, Stephen J. Chanock, Katherine L. Nathanson
Nat Genet. Author manuscript; available in PMC 2013 Dec 1.
Published in final edited form as: Nat Genet. 2013 Jun; 45(6): 680–685. Published online 2013 May 12. doi: 10.1038/ng.2634
PMCID:
PMC3723930
AbstractArticlePDF–1.0M
13.
Identification of nine new susceptibility loci for testicular cancer, including variants near DAZL and PRDM14
Elise Ruark, Sheila Seal, Heather McDonald, Feng Zhang, Anna Elliot, KingWai Lau, Elizabeth Perdeaux, Elizabeth Rapley, Rosalind Eeles, Julian Peto, Zsofia Kote-Jarai, Kenneth Muir, Jeremie Nsengimana, Janet Shipley, UKTCC, D. Timothy Bishop, Michael R Stratton, Douglas F Easton, Robert A Huddart, Nazneen Rahman, Clare Turnbull
Nat Genet. Author manuscript; available in PMC 2013 Dec 1.
Published in final edited form as: Nat Genet. 2013 Jun; 45(6): 10.1038/ng.2635. Published online 2013 May 12. doi: 10.1038/ng.2635
PMCID:
PMC3680037
AbstractArticlePDF–246K
14.
Tex14, a Plk1 regulated protein, is required for kinetochore-microtubule attachment and regulation of the spindle assembly checkpoint
Gourish Mondal, Akihiro Ohashi, Lin Yang, Matthew Rowley, Fergus J Couch
Mol Cell. Author manuscript; available in PMC 2013 Mar 9.
Published in final edited form as: Mol Cell. 2012 Mar 9; 45(5): 680–695. doi: 10.1016/j.molcel.2012.01.013
PMCID:
PMC3302152
AbstractArticlePDF–4.3M
15.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
16.
TEX14 Interacts with CEP55 To Block Cell Abscission
Tokuko Iwamori, Naoki Iwamori, Lang Ma, Mark A. Edson, Michael P. Greenbaum, Martin M. Matzuk
Mol Cell Biol. 2010 May; 30(9): 2280–2292. Published online 2010 Feb 22. doi: 10.1128/MCB.01392-09
PMCID:
PMC2863583
AbstractArticlePDF–4.7M
17.
Association of Mitotic Regulation Pathway Polymorphisms with Pancreatic Cancer Risk and Outcome
Fergus J. Couch, Xianshu Wang, William R. Bamlet, Mariza de Andrade, Gloria M. Petersen, Robert R. McWilliams
Cancer Epidemiol Biomarkers Prev. Author manuscript; available in PMC 2011 Jan 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2010 Jan; 19(1): 251–257. doi: 10.1158/1055-9965.EPI-09-0629
PMCID:
PMC2805468
AbstractArticlePDF–306K
18.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K
19.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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