PMC Links for GEO Profiles (Select 109626127) - PMC

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Items: 13

Select item 84467931.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 79951762.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 66837503.

The amino acid transporter SLC-36.1 cooperates with PtdIns3P 5-kinase to control phagocytic lysosome reformation

Qiwen Gan, Xin Wang, Qian Zhang, Qiuyuan Yin, Youli Jian, Yubing Liu, Nan Xuan, Jinglin Li, Junxiang Zhou, Kai Liu, Yudong Jing, Xiaochen Wang, Chonglin Yang

J Cell Biol. 2019 Aug 5; 218(8): 2619–2637. Published online 2019 Jun 24. doi: 10.1083/jcb.201901074

PMCID:: PMC6683750

Abstract Article PDF–6.5M

Select item 62165904.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 50468365.

PIKfyve regulates vacuole maturation and nutrient recovery following engulfment

Shefali Krishna, Wilhelm Palm, Yongchan Lee, Wendy Yang, Urmi Bandyopadhyay, Haoxing Xu, Oliver Florey, Craig B. Thompson, Michael Overholtzer

Dev Cell. Author manuscript; available in PMC 2017 Sep 12.

Published in final edited form as: Dev Cell. 2016 Sep 12; 38(5): 536–547. doi: 10.1016/j.devcel.2016.08.001

PMCID:: PMC5046836

Abstract Article PDF–2.1M

Select item 33743146.

Synaptic Polarity Depends on Phosphatidylinositol Signaling Regulated by myo-Inositol Monophosphatase in Caenorhabditis elegans

Tsubasa Kimata, Yoshinori Tanizawa, Yoko Can, Shingo Ikeda, Atsushi Kuhara, Ikue Mori

Genetics. 2012 Jun; 191(2): 509–521. doi: 10.1534/genetics.111.137844

PMCID:: PMC3374314

Abstract Article PDF–2.5M

Select item 31020777.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 28515498.

A novel pathway for phagosome maturation during engulfment of apoptotic cells

Jason M. Kinchen, Kimon Doukoumetzidis, Johann Almendinger, Lilli Stergiou, Annie Tosello-Trampont, Costi D. Sifri, Michael O. Hengartner, Kodi S. Ravichandran

Nat Cell Biol. Author manuscript; available in PMC 2010 Apr 8.

Published in final edited form as: Nat Cell Biol. 2008 May; 10(5): 556–566. Published online 2008 Apr 20. doi: 10.1038/ncb1718

PMCID:: PMC2851549

Abstract Article PDF–5.7M

Select item 23232209.

Cell-specific microarray profiling experiments reveal a comprehensive picture of gene expression in the C. elegans nervous system

Stephen E Von Stetina, Joseph D Watson, Rebecca M Fox, Kellen L Olszewski, W Clay Spencer, Peter J Roy, David M Miller, III

Genome Biol. 2007; 8(7): R135. Published online 2007 Jul 5. doi: 10.1186/gb-2007-8-7-r135

PMCID:: PMC2323220

Abstract Article PDF–1.7M

Select item 226782110.

Phagocytic Receptor CED-1 Initiates a Signaling Pathway for Degrading Engulfed Apoptotic Cells

Xiaomeng Yu, Nan Lu, Zheng Zhou

PLoS Biol. 2008 Mar; 6(3): e61. Published online 2008 Mar 18. doi: 10.1371/journal.pbio.0060061

PMCID:: PMC2267821

Abstract Article PDF–1.7M

Select item 195013811.

Role of phosphatidylinositol-4-phosphate 5′ kinase (ppk-1) in ovulation of Caenorhabditis elegans

Xiaojian Xu, Haisu Guo, Diane L. Wycuff, Myeongwoo Lee

Exp Cell Res. Author manuscript; available in PMC 2008 Jul 1.

Published in final edited form as: Exp Cell Res. 2007 Jul 1; 313(11): 2465–2475. Published online 2007 Mar 24. doi: 10.1016/j.yexcr.2007.03.017

PMCID:: PMC1950138

Abstract Article PDF–737K

Select item 156767512.

The WD40 and FYVE domain containing protein 2 defines a class of early endosomes necessary for endocytosis

Akira Hayakawa, Deborah Leonard, Stephanie Murphy, Susan Hayes, Martha Soto, Kevin Fogarty, Clive Standley, Karl Bellve, David Lambright, Craig Mello, Silvia Corvera

Proc Natl Acad Sci U S A. 2006 Aug 8; 103(32): 11928–11933. Published online 2006 Jul 27. doi: 10.1073/pnas.0508832103