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Items: 1 to 20 of 30

1.
Segregated localization of two calponin-related proteins within sarcomeric thin filaments in Caenorhabditis elegans striated muscle
Shoichiro Ono
Cytoskeleton (Hoboken) Author manuscript; available in PMC 2024 Aug 1.
Published in final edited form as: Cytoskeleton (Hoboken). 2024 Feb-Mar; 81(2-3): 127–140. Published online 2023 Oct 4. doi: 10.1002/cm.21794
PMCID:
PMC11249056
AbstractArticlePDF–2.2M
2.
CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing
Doreen I. Lugano, Lindsey N. Barrett, Dale Chaput, Margaret A. Park, Sandy D. Westerheide
RNA Biol. 2024; 21(1): 1–11. Published online 2023 Dec 21. doi: 10.1080/15476286.2023.2289707
PMCID:
PMC10761121
AbstractArticlePDF–2.5M
3.
DOT-1.1 (DOT1L) deficiency in C. elegans leads to small RNA-dependent gene activation
Thomas Liontis, Karisma Verma, Alla Grishok
BBA Adv. 2023; 3: 100080. Published online 2023 Feb 1. doi: 10.1016/j.bbadva.2023.100080
PMCID:
PMC10074844
AbstractArticlePDF–3.6M
4.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
5.
SGPL1 stimulates VPS39 recruitment to the mitochondria in MICU1 deficient cells
Joshua Jackson, Lena Wischhof, Enzo Scifo, Anna Pellizzer, Yiru Wang, Antonia Piazzesi, Debora Gentile, Sana Siddig, Miriam Stork, Chris E. Hopkins, Kristian Händler, Joachim Weis, Andreas Roos, Joachim L. Schultze, Pierluigi Nicotera, Dan Ehninger, Daniele Bano
Mol Metab. 2022 Jul; 61: 101503. Published online 2022 Apr 19. doi: 10.1016/j.molmet.2022.101503
PMCID:
PMC9170783
AbstractArticlePDF–3.7M
6.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
7.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
8.
Autofluorescence as a noninvasive biomarker of senescence and advanced glycation end products in Caenorhabditis elegans
Tomomi Komura, Mikihiro Yamanaka, Kohji Nishimura, Keita Hara, Yoshikazu Nishikawa
NPJ Aging Mech Dis. 2021; 7: 12. Published online 2021 Jun 7. doi: 10.1038/s41514-021-00061-y
PMCID:
PMC8184826
AbstractArticlePDF–2.0M
9.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
10.
Two Caenorhabditis elegans calponin-related proteins have overlapping functions that maintain cytoskeletal integrity and are essential for reproduction
Shoichiro Ono, Kanako Ono
J Biol Chem. 2020 Aug 21; 295(34): 12014–12027. Published online 2020 Jun 18. doi: 10.1074/jbc.RA120.014133
PMCID:
PMC7443509
AbstractArticlePDF–3.9M
11.
Global Proteomic Response of Caenorhabditis elegans Against PemKSa Toxin
Dilawar Ahmad Mir, Krishnaswamy Balamurugan
Front Cell Infect Microbiol. 2019; 9: 172. Published online 2019 May 31. doi: 10.3389/fcimb.2019.00172
PMCID:
PMC6555269
AbstractArticlePDF–3.7M
12.
A tissue-specific protein purification approach in Caenorhabditis elegans identifies novel interaction partners of DLG-1/Discs large
Selma Waaijers, Javier Muñoz, Christian Berends, João J. Ramalho, Soenita S. Goerdayal, Teck Y. Low, Adja D. Zoumaro-Djayoon, Michael Hoffmann, Thijs Koorman, Roderick P. Tas, Martin Harterink, Stefanie Seelk, Jana Kerver, Casper C. Hoogenraad, Olaf Bossinger, Baris Tursun, Sander van den Heuvel, Albert J. R. Heck, Mike Boxem
BMC Biol. 2016; 14: 66. Published online 2016 Aug 9. doi: 10.1186/s12915-016-0286-x
PMCID:
PMC4977824
AbstractArticlePDF–3.1M
13.
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
Anna Y. Zinovyeva, Isana Veksler-Lublinsky, Ajay A. Vashisht, James A. Wohlschlegel, Victor R. Ambros
Proc Natl Acad Sci U S A. 2015 Sep 22; 112(38): E5271–E5280. Published online 2015 Sep 8. doi: 10.1073/pnas.1506576112
PMCID:
PMC4586838
AbstractArticlePDF–1.1M
14.
UNC-87 isoforms, Caenorhabditis elegans calponin-related proteins, interact with both actin and myosin and regulate actomyosin contractility
Kanako Ono, Takashi Obinata, Sawako Yamashiro, Zhongmei Liu, Shoichiro Ono
Mol Biol Cell. 2015 May 1; 26(9): 1687–1698. doi: 10.1091/mbc.E14-10-1483
PMCID:
PMC4436780
AbstractArticlePDF–5.0M
15.
Cell-specific proteomic analysis in Caenorhabditis elegans
Kai P. Yuet, Meenakshi K. Doma, John T. Ngo, Michael J. Sweredoski, Robert L. J. Graham, Annie Moradian, Sonja Hess, Erin M. Schuman, Paul W. Sternberg, David A. Tirrell
Proc Natl Acad Sci U S A. 2015 Mar 3; 112(9): 2705–2710. Published online 2015 Feb 17. doi: 10.1073/pnas.1421567112
PMCID:
PMC4352802
AbstractArticlePDF–1.0M
16.
A UPR-independent infection-specific role for a BiP/GRP78 protein in the control of antimicrobial peptide expression in C. elegans epidermis
Carole Couillault, Patrick Fourquet, Matthieu Pophillat, Jonathan J. Ewbank
Virulence. 2012 May 1; 3(3): 299–308. doi: 10.4161/viru.20384
PMCID:
PMC3442842
AbstractArticlePDF–1.2M
17.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
18.
A novel pathway for phagosome maturation during engulfment of apoptotic cells
Jason M. Kinchen, Kimon Doukoumetzidis, Johann Almendinger, Lilli Stergiou, Annie Tosello-Trampont, Costi D. Sifri, Michael O. Hengartner, Kodi S. Ravichandran
Nat Cell Biol. Author manuscript; available in PMC 2010 Apr 8.
Published in final edited form as: Nat Cell Biol. 2008 May; 10(5): 556–566. Published online 2008 Apr 20. doi: 10.1038/ncb1718
PMCID:
PMC2851549
AbstractArticlePDF–5.7M
19.
Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans
John A Lewis, Maria Szilagyi, Elizabeth Gehman, William E Dennis, David A Jackson
BMC Genomics. 2009; 10: 202. Published online 2009 Apr 29. doi: 10.1186/1471-2164-10-202
PMCID:
PMC2689271
AbstractArticlePDF–396K
20.
UNC-87, a calponin-related protein in C. elegans, antagonizes ADF/cofilin-mediated actin filament dynamics
Sawako Yamashiro, Mario Gimona, Shoichiro Ono
J Cell Sci. Author manuscript; available in PMC 2008 May 2.
Published in final edited form as: J Cell Sci. 2007 Sep 1; 120(Pt 17): 3022–3033. Published online 2007 Aug 7. doi: 10.1242/jcs.013516
PMCID:
PMC2365702
AbstractArticlePDF–3.4M

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