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Items: 1 to 20 of 23

1.
Assessment of community efforts to advance network-based prediction of protein–protein interactions
Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu
Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7
PMCID:
PMC10033937
AbstractArticlePDF–1.5M
2.
Downregulation of FXYD2 Is Associated with Poor Prognosis and Increased Regulatory T Cell Infiltration in Clear Cell Renal Cell Carcinoma
Zedan Zhang, Yanlin Tang, Lei Li, Wuping Yang, Yawei Xu, Jingcheng Zhou, Kaifang Ma, Kenan Zhang, Hongkai Zhuang, Yanqing Gong, Kan Gong
J Immunol Res. 2022; 2022: 4946197. Published online 2022 Oct 19. doi: 10.1155/2022/4946197
PMCID:
PMC9606837
AbstractArticlePDF–3.2M
3.
Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states
Yingying Guo, Yuanyuan Zhang, Renhong Yan, Bangdong Huang, Fangfei Ye, Liushu Wu, Ximin Chi, Yi shi, Qiang Zhou
Nat Commun. 2022; 13: 3957. Published online 2022 Jul 8. doi: 10.1038/s41467-022-31602-y
PMCID:
PMC9270386
AbstractArticlePDF–5.7M
4.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
5.
Estrogen-regulated feedback loop limits the efficacy of estrogen receptor–targeted breast cancer therapy
Tengfei Xiao, Wei Li, Xiaoqing Wang, Han Xu, Jixin Yang, Qiu Wu, Ying Huang, Joseph Geradts, Peng Jiang, Teng Fei, David Chi, Chongzhi Zang, Qi Liao, Jonathan Rennhack, Eran Andrechek, Nanlin Li, Simone Detre, Mitchell Dowsett, Rinath M. Jeselsohn, X. Shirley Liu, Myles Brown
Proc Natl Acad Sci U S A. 2018 Jul 31; 115(31): 7869–7878. Published online 2018 Jul 9. doi: 10.1073/pnas.1722617115
PMCID:
PMC6077722
AbstractArticlePDF–2.4M
6.
Targeting FXYD2 by cardiac glycosides potently blocks tumor growth in ovarian clear cell carcinoma
I-Ling Hsu, Cheng-Yang Chou, Yi-Ying Wu, Jia-En Wu, Chen-Hsien Liang, Yao-Tsung Tsai, Jhen-Yu Ke, Yuh-Ling Chen, Keng-Fu Hsu, Tse-Ming Hong
Oncotarget. 2016 Sep 27; 7(39): 62925–62938. Published online 2016 Feb 19. doi: 10.18632/oncotarget.7497
PMCID:
PMC5325337
AbstractArticlePDF–8.7M
7.
Structure of the Na,K-ATPase regulatory protein FXYD2b in micelles: Implications for membrane-water interfacial arginines
Xiao-Min Gong, Yi Ding, Jinghua Yu, Yong Yao, Francesca M. Marassi
Biochim Biophys Acta. Author manuscript; available in PMC 2016 Jan 1.
Published in final edited form as: Biochim Biophys Acta. 2015 Jan; 1848(0): 299–306. Published online 2014 May 2. doi: 10.1016/j.bbamem.2014.04.021
PMCID:
PMC4216782
AbstractArticlePDF–2.1M
8.
Route, mechanism, and implications of proton import during Na+/K+ exchange by native Na+/K+-ATPase pumps
Natascia Vedovato, David C. Gadsby
J Gen Physiol. 2014 Apr; 143(4): 449–464. doi: 10.1085/jgp.201311148
PMCID:
PMC3971657
AbstractArticlePDF–2.1M
9.
Mutations in PCBD1 Cause Hypomagnesemia and Renal Magnesium Wasting
Silvia Ferrè, Jeroen H.F. de Baaij, Patrick Ferreira, Roger Germann, Johannis B.C. de Klerk, Marla Lavrijsen, Femke van Zeeland, Hanka Venselaar, Leo A.J. Kluijtmans, Joost G.J. Hoenderop, René J.M. Bindels
J Am Soc Nephrol. 2014 Mar; 25(3): 574–586. Published online 2013 Nov 7. doi: 10.1681/ASN.2013040337
PMCID:
PMC3935582
AbstractArticle
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Expression of Conjoined Genes: Another Mechanism for Gene Regulation in Eukaryotes
Tulika Prakash, Vineet K. Sharma, Naoki Adati, Ritsuko Ozawa, Naveen Kumar, Yuichiro Nishida, Takayoshi Fujikake, Tadayuki Takeda, Todd D. Taylor
PLoS One. 2010; 5(10): e13284. Published online 2010 Oct 12. doi: 10.1371/journal.pone.0013284
PMCID:
PMC2953495
AbstractArticlePDF–1.0M
12.
Structures of the FXYD regulatory proteins in lipid micelles and membranes
Carla M. Franzin, Xiao-Min Gong, Peter Teriete, Francesca M. Marassi
J Bioenerg Biomembr. Author manuscript; available in PMC 2010 Aug 7.
Published in final edited form as: J Bioenerg Biomembr. 2007 Dec; 39(5-6): 379–383. doi: 10.1007/s10863-007-9105-y
PMCID:
PMC2917602
AbstractArticlePDF–1.1M
13.
FXYD2 and Na,K-ATPase Expression in Isolated Human Proximal Tubular Cells: Disturbed Upregulation on Renal Hypomagnesemia?
Edinio R. Cairo, Herman G. P. Swarts, Martijn J. G. Wilmer, Peter H. G. M. Willems, Elena N. Levtchenko, Jan Joep H. H. M. De Pont, Jan B. Koenderink
J Membr Biol. 2009; 231(2): 117–124. Published online 2009 Oct 29. doi: 10.1007/s00232-009-9210-4
PMCID:
PMC2776943
AbstractArticlePDF–348K
14.
Large-Scale Proteomics and Phosphoproteomics of Urinary Exosomes
Patricia A. Gonzales, Trairak Pisitkun, Jason D. Hoffert, Dmitry Tchapyjnikov, Robert A. Star, Robert Kleta, Nam Sun Wang, Mark A. Knepper
J Am Soc Nephrol. 2009 Feb; 20(2): 363–379. doi: 10.1681/ASN.2008040406
PMCID:
PMC2637050
AbstractArticle
15.
Human FXYD2 G41R mutation responsible for renal hypomagnesemia behaves as an inward-rectifying cation channel
Qun Sha, Wade Pearson, Lauren C. Burcea, Darian A. Wigfall, Paul H. Schlesinger, Colin G. Nichols, Robert W. Mercer
Am J Physiol Renal Physiol. 2008 Jul; 295(1): F91–F99. Published online 2008 Apr 30. doi: 10.1152/ajprenal.00519.2007
PMCID:
PMC2494510
AbstractArticle
16.
Human autoantibody to RNA polymerase I transcription factor hUBF. Molecular identity of nucleolus organizer region autoantigen NOR-90 and ribosomal RNA transcription upstream binding factor
J Exp Med. 1991 Nov 1; 174(5): 1239–1244. doi: 10.1084/jem.174.5.1239
PMCID:
PMC2119007
SummaryPDF–931K
17.
Hereditary isolated renal magnesium loss maps to chromosome 11q23.
I C Meij, K Saar, L P van den Heuvel, G Nuernberg, M Vollmer, F Hildebrandt, A Reis, L A Monnens, N V Knoers
Am J Hum Genet. 1999 Jan; 64(1): 180–188. doi: 10.1086/302199
PMCID:
PMC1377716
SummaryPDF–383K
18.
The gene for glycogen-storage disease type 1b maps to chromosome 11q23.
B Annabi, H Hiraiwa, B C Mansfield, K J Lei, T Ubagai, M H Polymeropoulos, S W Moses, R Parvari, E Hershkovitz, H Mandel, M Fryman, J Y Chou
Am J Hum Genet. 1998 Feb; 62(2): 400–405. doi: 10.1086/301727
PMCID:
PMC1376902
SummaryPDF–261K
19.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K
20.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K

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