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Items: 1 to 20 of 144

1.
APOBEC3F Is a Mutational Driver of the Human Monkeypox Virus Identified in the 2022 Outbreak
Rodolphe Suspène, Kyle A Raymond, Laetitia Boutin, Sophie Guillier, Frédéric Lemoine, Olivier Ferraris, Jean-Nicolas Tournier, Frédéric Iseni, Etienne Simon-Lorière, Jean-Pierre Vartanian
J Infect Dis. 2023 Nov 15; 228(10): 1421–1429. Published online 2023 May 24. doi: 10.1093/infdis/jiad165
PMCID:
PMC11009509
AbstractArticlePDF–774K
2.
Pulse-SILAC and Interactomics Reveal Distinct DDB1-CUL4–Associated Factors, Cellular Functions, and Protein Substrates
Jennifer Raisch, Marie-Line Dubois, Marika Groleau, Dominique Lévesque, Thomas Burger, Carla-Marie Jurkovic, Romain Brailly, Gwendoline Marbach, Alyson McKenna, Catherine Barrette, Pierre-Étienne Jacques, François-Michel Boisvert
Mol Cell Proteomics. 2023 Oct; 22(10): 100644. Published online 2023 Sep 7. doi: 10.1016/j.mcpro.2023.100644
PMCID:
PMC10565876
AbstractArticlePDF–3.7M
3.
Stability of APOBEC3F in the Presence of the APOBEC3 Antagonist HIV-1 Vif Increases at the Expense of Co-Expressed APOBEC3H Haplotype I
Maria Yousefi, Arun Kumar Annan Sudarsan, Amit Gaba, Linda Chelico
Viruses. 2023 Feb; 15(2): 463. Published online 2023 Feb 7. doi: 10.3390/v15020463
PMCID:
PMC9960753
AbstractArticlePDF–12M
4.
HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation
Jingsheng Yuan, Tao Lv, Jian Yang, Zhenru Wu, Lvnan Yan, Jiayin Yang, Yujun Shi, Li Jiang
Cell Mol Gastroenterol Hepatol. 2023; 15(2): 307–325. Published online 2022 Oct 14. doi: 10.1016/j.jcmgh.2022.10.005
PMCID:
PMC9772558
AbstractArticlePDF–8.2M
5.
Differential activity of APOBEC3F, APOBEC3G, and APOBEC3H in the restriction of HIV-2
Morgan E. Meissner, Nora A. Willkomm, Jamie Lucas, William G. Arndt, Sarah F. Aitken, Emily J. Julik, Sunanda Baliga, Louis M. Mansky
J Mol Biol. Author manuscript; available in PMC 2023 Jan 30.
Published in final edited form as: J Mol Biol. 2022 Jan 30; 434(2): 167355. Published online 2021 Nov 10. doi: 10.1016/j.jmb.2021.167355
PMCID:
PMC8752514
AbstractArticlePDF–883K
6.
The von Hippel–Lindau Cullin-RING E3 ubiquitin ligase regulates APOBEC3 cytidine deaminases
Gaël K. Scholtès, Aubrey M. Sawyer, Cristina C. Vaca, Isabelle Clerc, Meejeon Roh, Chisu Song, Richard T. D’Aquila
Transl Res. Author manuscript; available in PMC 2022 Nov 1.
Published in final edited form as: Transl Res. 2021 Nov; 237: 1–15. Published online 2021 May 15. doi: 10.1016/j.trsl.2021.05.002
PMCID:
PMC8440357
AbstractArticlePDF–628K
7.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
8.
ARIH2 is a Vif-dependent regulator of CUL5-mediated APOBEC3G degradation in HIV infection
Ruth Hüttenhain, Jiewei Xu, Lily A. Burton, David E. Gordon, Judd F. Hultquist, Jeffrey R. Johnson, Laura Satkamp, Joseph Hiatt, David Y. Rhee, Kheewoong Baek, David C. Crosby, Alan D. Frankel, Alexander Marson, J. Wade Harper, Arno F. Alpi, Brenda A. Schulman, John D. Gross, Nevan J. Krogan
Cell Host Microbe. Author manuscript; available in PMC 2020 Jul 10.
Published in final edited form as: Cell Host Microbe. 2019 Jul 10; 26(1): 86–99.e7. Published online 2019 Jun 25. doi: 10.1016/j.chom.2019.05.008
PMCID:
PMC7153695
AbstractArticlePDF–2.6M
9.
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D
Susan A. Kennedy, Mohamed-Ali Jarboui, Sriganesh Srihari, Cinzia Raso, Kenneth Bryan, Layal Dernayka, Theodosia Charitou, Manuel Bernal-Llinares, Carlos Herrera-Montavez, Aleksandar Krstic, David Matallanas, Max Kotlyar, Igor Jurisica, Jasna Curak, Victoria Wong, Igor Stagljar, Thierry LeBihan, Lisa Imrie, Priyanka Pillai, Miriam A. Lynn, Erik Fasterius, Cristina Al-Khalili Szigyarto, James Breen, Christina Kiel, Luis Serrano, Nora Rauch, Oleksii Rukhlenko, Boris N. Kholodenko, Luis F. Iglesias-Martinez, Colm J. Ryan, Ruth Pilkington, Patrizia Cammareri, Owen Sansom, Steven Shave, Manfred Auer, Nicola Horn, Franziska Klose, Marius Ueffing, Karsten Boldt, David J. Lynn, Walter Kolch
Nat Commun. 2020; 11: 499. Published online 2020 Jan 24. doi: 10.1038/s41467-019-14224-9
PMCID:
PMC6981206
AbstractArticlePDF–3.7M
10.
Structural basis of antagonism of human APOBEC3F by HIV-1 Vif
Yingxia Hu, Belete A. Desimmie, Henry C. Nguyen, Samantha J. Ziegler, Tat Cheung Cheng, John Chen, Jia Wang, Hongwei Wang, Kai Zhang, Vinay K. Pathak, Yong Xiong
Nat Struct Mol Biol. Author manuscript; available in PMC 2020 Jun 2.
Published in final edited form as: Nat Struct Mol Biol. 2019 Dec; 26(12): 1176–1183. Published online 2019 Dec 2. doi: 10.1038/s41594-019-0343-6
PMCID:
PMC6899190
AbstractArticlePDF–6.2M
11.
The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis
Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino
Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9
PMCID:
PMC6778137
AbstractArticlePDF–7.8M
12.
PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling
Adnan Shami Shah, Alex G. Batrouni, Dongsung Kim, Amith Punyala, Wendy Cao, Chun Han, Michael L. Goldberg, Marcus B. Smolka, Jeremy M. Baskin
Cell Rep. Author manuscript; available in PMC 2019 Jun 26.
Published in final edited form as: Cell Rep. 2019 May 14; 27(7): 2157–2170.e8. doi: 10.1016/j.celrep.2019.04.060
PMCID:
PMC6594551
AbstractArticlePDF–1.4M
13.
Interactome and proteome dynamics uncover immune modulatory associations of the pathogen sensing factor cGAS
Krystal K. Lum, Bokai Song, Joel D. Federspiel, Benjamin A. Diner, Timothy Howard, Ileana M. Cristea
Cell Syst. Author manuscript; available in PMC 2019 Dec 26.
Published in final edited form as: Cell Syst. 2018 Dec 26; 7(6): 627–642.e6. Published online 2018 Nov 21. doi: 10.1016/j.cels.2018.10.010
PMCID:
PMC6310102
AbstractArticlePDF–3.5M
14.
RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease
Isaac Bishof, Eric B. Dammer, Duc M. Duong, Sean R. Kundinger, Marla Gearing, James J. Lah, Allan I. Levey, Nicholas T. Seyfried
J Biol Chem. 2018 Jul 13; 293(28): 11047–11066. Published online 2018 May 25. doi: 10.1074/jbc.RA118.001747
PMCID:
PMC6052236
AbstractArticlePDF–5.1M
15.
VIRMA mediates preferential m6A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation
Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu
Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0
PMCID:
PMC5826926
AbstractArticlePDF–2.3M
16.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
17.
Mechanism of Enhanced HIV Restriction by Virion Coencapsidated Cytidine Deaminases APOBEC3F and APOBEC3G
Anjuman Ara, Robin P. Love, Tyson B. Follack, Khawaja A. Ahmed, Madison B. Adolph, Linda Chelico
J Virol. 2017 Feb 1; 91(3): e02230-16. Prepublished online 2016 Nov 23. Published online 2017 Jan 18. doi: 10.1128/JVI.02230-16
PMCID:
PMC5244329
AbstractArticlePDF–1.7M
18.
Vif Proteins from Diverse Human Immunodeficiency Virus/Simian Immunodeficiency Virus Lineages Have Distinct Binding Sites in A3C
Zeli Zhang, Qinyong Gu, Ananda Ayyappan Jaguva Vasudevan, Manimehalai Jeyaraj, Stanislaw Schmidt, Jörg Zielonka, Mario Perković, Jens-Ove Heckel, Klaus Cichutek, Dieter Häussinger, Sander H. J. Smits, Carsten Münk
J Virol. 2016 Nov 15; 90(22): 10193–10208. Prepublished online 2016 Aug 31. Published online 2016 Oct 28. doi: 10.1128/JVI.01497-16
PMCID:
PMC5105656
AbstractArticlePDF–4.0M
19.
APOBEC3 proteins can copackage and comutate HIV-1 genomes
Belete A. Desimmie, Ryan C. Burdick, Taisuke Izumi, Hibiki Doi, Wei Shao, W. Gregory Alvord, Kei Sato, Yoshio Koyanagi, Sara Jones, Eleanor Wilson, Shawn Hill, Frank Maldarelli, Wei-Shau Hu, Vinay K. Pathak
Nucleic Acids Res. 2016 Sep 19; 44(16): 7848–7865. Published online 2016 Jul 20. doi: 10.1093/nar/gkw653
PMCID:
PMC5027510
AbstractArticlePDF–1.6M
20.
Structural determinants of HIV-1 Vif susceptibility and DNA binding in APOBEC3F
Karen K. Siu, Azmiri Sultana, Farshad C. Azimi, Jeffrey E. Lee
Nat Commun. Author manuscript; available in PMC 2016 Jul 21.
Published in final edited form as: Nat Commun. 2013; 4: 2593. doi: 10.1038/ncomms3593
PMCID:
PMC4956467
AbstractArticlePDF–1.8M

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