PMC Links for GEO Profiles (Select 105061273) - PMC

Pauline Antonie Ulmke, M. Sadman Sakib, Peter Ditte, Godwin Sokpor, Cemil Kerimoglu, Linh Pham, Yuanbin Xie, Xiaoyi Mao, Joachim Rosenbusch, Ulrike Teichmann, Huu Phuc Nguyen, Andre Fischer, Gregor Eichele, Jochen F. Staiger, Tran Tuoc

Stem Cell Reports. 2021 Apr 13; 16(4): 968–984. Published online 2021 Apr 1. doi: 10.1016/j.stemcr.2021.03.008

PMCID:: PMC8072132

Abstract Article PDF–8.1M

Select item 79387704.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 63813885.

Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System

Fatima Memic, Viktoria Knoflach, Khomgrit Morarach, Rebecca Sadler, Catia Laranjeira, Jens Hjerling-Leffler, Erik Sundström, Vassilis Pachnis, Ulrika Marklund

Gastroenterology. 2018 Feb; 154(3): 624–636. doi: 10.1053/j.gastro.2017.10.005

PMCID:: PMC6381388

Abstract Article

Select item 63279776.

Neurog3-independent methylation is the earliest detectable mark distinguishing pancreatic progenitor identity

Jing Liu, Amrita Banerjee, Charles A. Herring, Jonathan Attalla, Ruiying Hu, Yanwen Xu, Qiujia Shao, Alan J. Simmons, Prasanna K. Dadi, Sui Wang, David A. Jacobson, Bindong Liu, Emily Hodges, Ken S. Lau, Guoqiang Gu

Dev Cell. Author manuscript; available in PMC 2020 Jan 7.

Published in final edited form as: Dev Cell. 2019 Jan 7; 48(1): 49–63.e7. doi: 10.1016/j.devcel.2018.11.048

PMCID:: PMC6327977

Abstract Article PDF–4.1M

Select item 60524577.

Developmental diversification of cortical inhibitory interneurons

Christian Mayer, Christoph Hafemeister, Rachel C. Bandler, Robert Machold, Renata Batista Brito, Xavier Jaglin, Kathryn Allaway, Andrew Butler, Gord Fishell, Rahul Satija

Nature. Author manuscript; available in PMC 2018 Sep 5.

Published in final edited form as: Nature. 2018 Mar 22; 555(7697): 457–462. Published online 2018 Mar 5. doi: 10.1038/nature25999

PMCID:: PMC6052457

Abstract Article PDF–2.3M

Select item 50672838.

MyT1 Counteracts the Neural Progenitor Program to Promote Vertebrate Neurogenesis

Francisca F. Vasconcelos, Alessandro Sessa, Cátia Laranjeira, Alexandre A.S.F. Raposo, Vera Teixeira, Daniel W. Hagey, Diogo M. Tomaz, Jonas Muhr, Vania Broccoli, Diogo S. Castro

Cell Rep. 2016 Oct 4; 17(2): 469–483. Published online 2016 Oct 4. doi: 10.1016/j.celrep.2016.09.024

PMCID:: PMC5067283

Abstract Article

Select item 43195599.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 414026710.

Identification of Myelin Transcription Factor 1 (MyT1) as a Subunit of the Neural Cell Type-specific Lysine-specific Demethylase 1 (LSD1) Complex

Atsushi Yokoyama, Katsuhide Igarashi, Tetsuya Sato, Kiyoshi Takagi, Maky Otsuka I., Yurina Shishido, Takashi Baba, Ryo Ito, Jun Kanno, Yasuyuki Ohkawa, Ken-ichirou Morohashi, Akira Sugawara

J Biol Chem. 2014 Jun 27; 289(26): 18152–18162. Published online 2014 May 14. doi: 10.1074/jbc.M114.566448

PMCID:: PMC4140267

Abstract Article PDF–812K

Select item 385326911.

A Structural Analysis of DNA Binding by Myelin Transcription Factor 1 Double Zinc Fingers

Roland Gamsjaeger, Mitchell R. O'Connell, Liza Cubeddu, Nicholas E. Shepherd, Jason A. Lowry, Ann H. Kwan, Marylene Vandevenne, Michael K. Swanton, Jacqueline M. Matthews, Joel P. Mackay

J Biol Chem. 2013 Dec 6; 288(49): 35180–35191. Published online 2013 Oct 6. doi: 10.1074/jbc.M113.482075

PMCID:: PMC3853269

Abstract Article PDF–2.8M

Select item 373210712.

Pancreas-specific Cre driver lines and considerations for their prudent use

Mark A. Magnuson, Anna B. Osipovich

Cell Metab. Author manuscript; available in PMC 2014 Jul 2.

Published in final edited form as: Cell Metab. 2013 Jul 2; 18(1): 9–20. doi: 10.1016/j.cmet.2013.06.011

PMCID:: PMC3732107

Abstract Article PDF–717K

Select item 357241013.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 343984514.

A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract

Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith

Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130

PMCID:: PMC3439845

Abstract Article PDF–1.4M

Select item 328299115.

Identification of putative retinoic acid target genes downstream of mesenchymal Tbx1 during inner ear development

Dennis C. Monks, Bernice E. Morrow

Dev Dyn. Author manuscript; available in PMC 2013 Mar 1.

Published in final edited form as: Dev Dyn. 2012 Mar; 241(3): 563–573. Published online 2012 Feb 1. doi: 10.1002/dvdy.23731

PMCID:: PMC3282991

Abstract Article PDF–852K

Select item 317805916.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 316910917.

Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing

Albert E. Ayoub, Sunghee Oh, Yanhua Xie, Jing Leng, Justin Cotney, Martin H. Dominguez, James P. Noonan, Pasko Rakic

Proc Natl Acad Sci U S A. 2011 Sep 6; 108(36): 14950–14955. Published online 2011 Aug 22. doi: 10.1073/pnas.1112213108

PMCID:: PMC3169109

Abstract Article PDF–849K

Select item 313908718.

A tool for examining the role of the zinc finger myelin transcription factor 1 (Myt1) in neural development: Myt1 knock-in mice

Lynn D. Hudson, Elena Romm, Jo Ann Berndt, Joseph A. Nielsen

Transgenic Res. 2011; 20(4): 951–961. Published online 2011 Jan 26. doi: 10.1007/s11248-010-9470-x

PMCID:: PMC3139087

Abstract Article PDF–614K

Select item 302253419.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 279940420.

Identification of known and novel pancreas genes expressed downstream of Nkx2.2 during development

Keith R Anderson, Peter White, Klaus H Kaestner, Lori Sussel

BMC Dev Biol. 2009; 9: 65. Published online 2009 Dec 10. doi: 10.1186/1471-213X-9-65

PMCID:: PMC2799404

Abstract Article PDF–2.5M

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