PMC Links for GEO Profiles (Select 102581218) - PMC

Select item 111907081.

The increase of long noncoding RNA Fendrr in hepatocytes contributes to liver fibrosis by promoting IL-6 production

Zhiqian Kang, Chenqi Wang, Fang Shao, Hao Deng, Yanyan Sun, Zhengrong Ren, Wei Zhang, Zhi Ding, Junfeng Zhang, Yuhui Zang

J Biol Chem. 2024 Jun; 300(6): 107376. Published online 2024 May 16. doi: 10.1016/j.jbc.2024.107376

PMCID:: PMC11190708

Abstract Article PDF–7.2M

Select item 103259022.

Fendrr synergizes with Wnt signalling to regulate fibrosis related genes during lung development via its RNA:dsDNA triplex element

Tamer Ali, Sandra Rogala, Nina M Krause, Jasleen Kaur Bains, Maria-Theodora Melissari, Sandra Währisch, Harald Schwalbe, Bernhard G Herrmann, Phillip Grote

Nucleic Acids Res. 2023 Jul 7; 51(12): 6227–6237. Published online 2023 May 19. doi: 10.1093/nar/gkad395

PMCID:: PMC10325902

Abstract Article PDF–1.9M

Select item 98911593.

LncRNA Fendrr: involvement in the protective role of nucleolin against H₂O₂-induced injury in cardiomyocytes

Cheng Chen, Xiaofang Lin, Yuting Tang, Hui Sun, Leijing Yin, Zhengyang Luo, Shuxin Wang, Pengfei Liang, Bimei Jiang

Redox Rep. 2023; 28(1): 2168626. Published online 2023 Jan 31. doi: 10.1080/13510002.2023.2168626

PMCID:: PMC9891159

Abstract Article PDF–2.2M

Select item 95948744.

LncRNA FENDRR with m6A RNA methylation regulates hypoxia-induced pulmonary artery endothelial cell pyroptosis by mediating DRP1 DNA methylation

Xiaoying Wang, Qian Li, Siyu He, June Bai, Cui Ma, Lixin Zhang, Xiaoyu Guan, Hao Yuan, Yiying Li, Xiangrui Zhu, Jian Mei, Feng Gao, Daling Zhu

Mol Med. 2022; 28: 126. Published online 2022 Oct 25. doi: 10.1186/s10020-022-00551-z

PMCID:: PMC9594874

Abstract Article PDF–9.8M

Select item 80482615.

LncRNA-Fendrr protects against the ubiquitination and degradation of NLRC4 protein through HERC2 to regulate the pyroptosis of microglia

Li-Qing Wang, Yue-Ying Zheng, Heng-Jun Zhou, Xiong-Xin Zhang, Pin Wu, Sheng-Mei Zhu

Mol Med. 2021; 27: 39. Published online 2021 Apr 15. doi: 10.1186/s10020-021-00299-y

PMCID:: PMC8048261

Abstract Article PDF–3.0M

Select item 74268446.

Long non-coding RNA FENDRR regulates IFNγ-induced M1 phenotype in macrophages

Maria Cristina Munteanu, Chaoqun Huang, Yurong Liang, Roshini Sathiaseelan, Xiangming Zeng, Lin Liu

Sci Rep. 2020; 10: 13672. Published online 2020 Aug 13. doi: 10.1038/s41598-020-70633-7

PMCID:: PMC7426844

Abstract Article PDF–4.1M

Select item 54495937.

A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation

Zenghua Fan, Meng Zhao, Parth D. Joshi, Ping Li, Yan Zhang, Weimin Guo, Yichi Xu, Haifang Wang, Zhihu Zhao, Jun Yan

Nucleic Acids Res. 2017 Jun 2; 45(10): 5720–5738. Published online 2017 Mar 8. doi: 10.1093/nar/gkx156

PMCID:: PMC5449593

Abstract Article PDF–5.2M

Select item 48106828.

FOXF1 Transcription Factor Is Required for Formation of Embryonic Vasculature by Regulating VEGF Signaling in Endothelial Cells

Xiaomeng Ren, Vladimir Ustiyan, Arun Pradhan, Yuqi Cai, Jamie A. Havrilak, Craig S. Bolte, John M. Shannon, Tanya V. Kalin, Vladimir V. Kalinichenko

Circ Res. Author manuscript; available in PMC 2016 Mar 29.

Published in final edited form as: Circ Res. 2014 Sep 26; 115(8): 709–720. Published online 2014 Aug 4. doi: 10.1161/CIRCRESAHA.115.304382

PMCID:: PMC4810682

Abstract Article PDF–4.7M

Select item 44092939.

Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs

Ka-Man Venus Lai, Guochun Gong, Amanda Atanasio, José Rojas, Joseph Quispe, Julita Posca, Derek White, Mei Huang, Daria Fedorova, Craig Grant, Lawrence Miloscio, Gustavo Droguett, William T. Poueymirou, Wojtek Auerbach, George D. Yancopoulos, David Frendewey, John Rinn, David M. Valenzuela

PLoS One. 2015; 10(4): e0125522. Published online 2015 Apr 24. doi: 10.1371/journal.pone.0125522

PMCID:: PMC4409293

Abstract Article PDF–20M

Select item 414917510.

The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse

Phillip Grote, Lars Wittler, Sandra Währisch, David Hendrix, Arica Beisaw, Karol Macura, Gaby Bläss, Manolis Kellis, Martin Werber, Bernhard G. Herrmann

Dev Cell. Author manuscript; available in PMC 2014 Aug 29.

Published in final edited form as: Dev Cell. 2013 Jan 28; 24(2): 206–214. doi: 10.1016/j.devcel.2012.12.012

PMCID:: PMC4149175

Abstract Article PDF–820K

Select item 406640511.

Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development

Michael J. Herriges, Daniel T. Swarr, Michael P. Morley, Komal S. Rathi, Tien Peng, Kathleen M. Stewart, Edward E. Morrisey

Genes Dev. 2014 Jun 15; 28(12): 1363–1379. doi: 10.1101/gad.238782.114

PMCID:: PMC4066405

Abstract Article PDF–2.7M

Select item 396496412.

The Vertebrate Genome Annotation browser 10 years on

Jennifer L. Harrow, Charles A. Steward, Adam Frankish, James G. Gilbert, Jose M. Gonzalez, Jane E. Loveland, Jonathan Mudge, Dan Sheppard, Mark Thomas, Stephen Trevanion, Laurens G. Wilming

Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D771–D779. Published online 2013 Dec 6. doi: 10.1093/nar/gkt1241

PMCID:: PMC3964964

Abstract Article PDF–11M

Select item 387410413.

Multiple knockout mouse models reveal lincRNAs are required for life and brain development

Martin Sauvageau, Loyal A Goff, Simona Lodato, Boyan Bonev, Abigail F Groff, Chiara Gerhardinger, Diana B Sanchez-Gomez, Ezgi Hacisuleyman, Eric Li, Matthew Spence, Stephen C Liapis, William Mallard, Michael Morse, Mavis R Swerdel, Michael F D’Ecclessis, Jennifer C Moore, Venus Lai, Guochun Gong, George D Yancopoulos, David Frendewey, Manolis Kellis, Ronald P Hart, David M Valenzuela, Paola Arlotta, John L Rinn

eLife. 2013; 2: e01749. Published online 2013 Dec 31. doi: 10.7554/eLife.01749

PMCID:: PMC3874104

Abstract Article PDF–4.6M

Select item 386623614.

The long non-coding RNA Fendrr links epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesis

Phillip Grote, Bernhard G Herrmann

RNA Biol. 2013 Oct 1; 10(10): 1579–1585. Published online 2013 Aug 22. doi: 10.4161/rna.26165

PMCID:: PMC3866236

Abstract Article PDF–1.1M

Select item 31099215.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098016.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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