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Items: 1 to 20 of 23

1.
Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis
Goro Tanifuji, Ryoma Kamikawa, Christa E Moore, Tyler Mills, Naoko T Onodera, Yuichiro Kashiyama, John M Archibald, Yuji Inagaki, Tetsuo Hashimoto
Genome Biol Evol. 2020 Feb; 12(2): 3926–3937. Published online 2020 Jan 10. doi: 10.1093/gbe/evaa001
PMCID:
PMC7058160
AbstractArticlePDF–730K
2.
Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch
Oleg Anatolyevich Zverkov, Alexandr Vladislavovich Seliverstov, Vassily Alexandrovich Lyubetsky
Life (Basel) 2016 Mar; 6(1): 7. Published online 2016 Jan 29. doi: 10.3390/life6010007
PMCID:
PMC4810238
AbstractArticlePDF–1.3M
3.
Algorithms for reconstruction of chromosomal structures
Vassily Lyubetsky, Roman Gershgorin, Alexander Seliverstov, Konstantin Gorbunov
BMC Bioinformatics. 2016; 17: 40. Published online 2016 Jan 19. doi: 10.1186/s12859-016-0878-z
PMCID:
PMC4717669
AbstractArticlePDF–1.6M
4.
Molecular detection of bacteria in plant tissues, using universal 16S ribosomal DNA degenerated primers
Georgios Tsoktouridis, George Tsiamis, Nikolaos Koutinas, Sinclair Mantell
Biotechnol Biotechnol Equip. 2014 Jul 4; 28(4): 583–591. Published online 2014 Oct 22. doi: 10.1080/13102818.2014.937139
PMCID:
PMC4434121
AbstractArticlePDF–252K
5.
Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae
Heather M Hunsperger, Tejinder Randhawa, Rose Ann Cattolico
BMC Evol Biol. 2015; 15: 16. Published online 2015 Feb 10. doi: 10.1186/s12862-015-0286-4
PMCID:
PMC4337275
AbstractArticlePDF–3.4M
6.
The mitochondrial and chloroplast genomes of the haptophyte Chrysochromulina tobin contain unique repeat structures and gene profiles
Blake T Hovde, Shawn R Starkenburg, Heather M Hunsperger, Laina D Mercer, Chloe R Deodato, Ramesh K Jha, Olga Chertkov, Raymond J Monnat, Jr, Rose Ann Cattolico
BMC Genomics. 2014; 15: 604. Published online 2014 Jul 17. doi: 10.1186/1471-2164-15-604
PMCID:
PMC4226036
AbstractArticlePDF–2.6M
7.
Complete Genes May Pass from Food to Human Blood
Sándor Spisák, Norbert Solymosi, Péter Ittzés, András Bodor, Dániel Kondor, Gábor Vattay, Barbara K. Barták, Ferenc Sipos, Orsolya Galamb, Zsolt Tulassay, Zoltán Szállási, Simon Rasmussen, Thomas Sicheritz-Ponten, Søren Brunak, Béla Molnár, István Csabai
PLoS One. 2013; 8(7): e69805. Published online 2013 Jul 30. doi: 10.1371/journal.pone.0069805
PMCID:
PMC3728338
AbstractArticlePDF–730K
8.
The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate
Natalie Donaher, Goro Tanifuji, Naoko T. Onodera, Stephanie A. Malfatti, Patrick S. G. Chain, Yoshiaki Hara, John M. Archibald
Genome Biol Evol. 2009; 1: 439–448. Published online 2009 Nov 13. doi: 10.1093/gbe/evp047
PMCID:
PMC2839278
AbstractArticlePDF–440K
9.
A SecY Homologue Is Required for the Elaboration of the Chloroplast Thylakoid Membrane and for Normal Chloroplast Gene Expression
Laura M. Roy, Alice Barkan
J Cell Biol. 1998 Apr 20; 141(2): 385–395. doi: 10.1083/jcb.141.2.385
PMCID:
PMC2148445
AbstractArticlePDF–593K
10.
Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus
Linda A Raubeson, Rhiannon Peery, Timothy W Chumley, Chris Dziubek, H Matthew Fourcade, Jeffrey L Boore, Robert K Jansen
BMC Genomics. 2007; 8: 174. Published online 2007 Jun 15. doi: 10.1186/1471-2164-8-174
PMCID:
PMC1925096
AbstractArticlePDF–1.4M
11.
The Balance between Protein Synthesis and Degradation in Chloroplasts Determines Leaf Variegation in Arabidopsis yellow variegated Mutants
Eiko Miura, Yusuke Kato, Ryo Matsushima, Verónica Albrecht, Soumaya Laalami, Wataru Sakamoto
Plant Cell. 2007 Apr; 19(4): 1313–1328. doi: 10.1105/tpc.106.049270
PMCID:
PMC1913758
AbstractArticlePDF–2.1M
12.
A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies
Claude Lemieux, Christian Otis, Monique Turmel
BMC Biol. 2007; 5: 2. Published online 2007 Jan 12. doi: 10.1186/1741-7007-5-2
PMCID:
PMC1781420
AbstractArticlePDF–1.3M
13.
An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
Danny W Rice, Jeffrey D Palmer
BMC Biol. 2006; 4: 31. Published online 2006 Sep 6. doi: 10.1186/1741-7007-4-31
PMCID:
PMC1570145
AbstractArticlePDF–602K
14.
Lineage-specific variations of congruent evolution among DNA sequences from three genomes, and relaxed selective constraints on rbcL in Cryptomonas (Cryptophyceae)
Kerstin Hoef-Emden, Hoang-Dung Tran, Michael Melkonian
BMC Evol Biol. 2005; 5: 56. Published online 2005 Oct 18. doi: 10.1186/1471-2148-5-56
PMCID:
PMC1285359
AbstractArticlePDF–357K
15.
Nucleotide sequence of the genes for ribosomal protein S4 and tRNA(Arg) from the chlorophyll c-containing alga Cryptomonas phi.
S E Douglas, D G Durnford
Nucleic Acids Res. 1990 Apr 11; 18(7): 1903. doi: 10.1093/nar/18.7.1903
PMCID:
PMC330626
SummaryPage BrowsePDF–151K
16.
A plastidic ABC protein involved in intercompartmental communication of light signaling
Simon Geir Møller, Tim Kunkel, Nam-Hai Chua
Genes Dev. 2001 Jan 1; 15(1): 90–103. doi: 10.1101/gad.850101
PMCID:
PMC312601
AbstractArticlePDF–21M
17.
Identification of nutrient partitioning genes participating in rice grain filling by singular value decomposition (SVD) of genome expression data
Abraham Anderson, Matthew Hudson, Wenqiong Chen, Tong Zhu
BMC Genomics. 2003; 4: 26. Published online 2003 Jul 10. doi: 10.1186/1471-2164-4-26
PMCID:
PMC169189
AbstractArticlePDF–975K
18.
The Chlamydomonas reinhardtii Plastid Chromosome: Islands of Genes in a Sea of Repeats
Jude E. Maul, Jason W. Lilly, Liying Cui, Claude W. dePamphilis, Webb Miller, Elizabeth H. Harris, David B. Stern
Plant Cell. 2002 Nov; 14(11): 2659–2679. doi: 10.1105/tpc.006155
PMCID:
PMC153795
AbstractArticlePDF–854K
19.
Partitioning of Bacterial Communities between Seawater and Healthy, Black Band Diseased, and Dead Coral Surfaces
Jorge Frias-Lopez, Aubrey L. Zerkle, George T. Bonheyo, Bruce W. Fouke
Appl Environ Microbiol. 2002 May; 68(5): 2214–2228. doi: 10.1128/AEM.68.5.2214-2228.2002
PMCID:
PMC127591
AbstractArticlePDF–5.7M
20.
Gene discovery within the planctomycete division of the domain Bacteria using sequence tags from genomic DNA libraries
Cheryl Jenkins, Vishram Kedar, John A Fuerst
Genome Biol. 2002; 3(6): research0031.1–research0031.11. Published online 2002 May 30. doi: 10.1186/gb-2002-3-6-research0031
PMCID:
PMC116728
AbstractArticlePDF–136K

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