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Items: 14

1.
The peptide transporter 1a of the zebrafish Danio rerio, an emerging model in nutrigenomics and nutrition research: molecular characterization, functional properties, and expression analysis
Francesca Vacca, Amilcare Barca, Ana S. Gomes, Aurora Mazzei, Barbara Piccinni, Raffaella Cinquetti, Gianmarco Del Vecchio, Alessandro Romano, Ivar Rønnestad, Elena Bossi, Tiziano Verri
Genes Nutr. 2019; 14: 33. Published online 2019 Dec 19. doi: 10.1186/s12263-019-0657-3
Correction in:
Genes Nutr. 2020; 15: 3.
PMCID:
PMC6923934
AbstractArticlePDF–1.9M
2.
Analyses of mRNA structure dynamics identify embryonic gene regulatory programs
Jean-Denis Beaudoin, Eva Maria Novoa, Charles E. Vejnar, Valeria Yartseva, Carter M. Takacs, Manolis Kellis, Antonio J. Giraldez
Nat Struct Mol Biol. Author manuscript; available in PMC 2019 Aug 12.
Published in final edited form as: Nat Struct Mol Biol. 2018 Aug; 25(8): 677–686. Published online 2018 Jul 30. doi: 10.1038/s41594-018-0091-z
PMCID:
PMC6690192
AbstractArticlePDF–2.7M
3.
An evolutionary approach to recover genes predominantly expressed in the testes of the zebrafish, chicken and mouse
Sophie Fouchécourt, Floriane Picolo, Sébastien Elis, Charlotte Lécureuil, Aurore Thélie, Marina Govoroun, Mégane Brégeon, Pascal Papillier, Jean-Jacques Lareyre, Philippe Monget
BMC Evol Biol. 2019; 19: 137. Published online 2019 Jul 3. doi: 10.1186/s12862-019-1462-8
PMCID:
PMC6609395
AbstractArticlePDF–1.9M
4.
GRIBCG: a software for selection of sgRNAs in the design of balancer chromosomes
Brian B. Merritt, Lily S. Cheung
BMC Bioinformatics. 2019; 20: 122. Published online 2019 Mar 12. doi: 10.1186/s12859-019-2712-x
PMCID:
PMC6416924
AbstractArticlePDF–1.4M
5.
DDX3 Participates in Translational Control of Inflammation Induced by Infections and Injuries
Yu-Chang Ku, Min-Hua Lai, Chen-Chia Lo, Yi-Chuan Cheng, Jian-Tai Qiu, Woan-Yuh Tarn, Ming-Chih Lai
Mol Cell Biol. 2019 Jan 1; 39(1): e00285-18. Prepublished online 2018 Oct 29. Published online 2018 Dec 11. doi: 10.1128/MCB.00285-18
PMCID:
PMC6290373
AbstractArticlePDF–3.8M
6.
A Comparative Genomic and Transcriptomic Survey Provides Novel Insights into N-Acetylserotonin Methyltransferase (ASMT) in Fish
Kai Zhang, Zhiqiang Ruan, Jia Li, Chao Bian, Xinxin You, Steven L. Coon, Qiong Shi
Molecules. 2017 Oct; 22(10): 1653. Published online 2017 Oct 2. doi: 10.3390/molecules22101653
PMCID:
PMC6151645
AbstractArticlePDF–5.0M
7.
Identification of DEAD-Box RNA Helicase DDX41 as a Trafficking Protein That Involves in Multiple Innate Immune Signaling Pathways in a Zebrafish Model
Jun-xia Ma, Jiang-yuan Li, Dong-dong Fan, Wei Feng, Ai-fu Lin, Li-xin Xiang, Jian-zhong Shao
Front Immunol. 2018; 9: 1327. Published online 2018 Jun 11. doi: 10.3389/fimmu.2018.01327
PMCID:
PMC6005158
AbstractArticlePDF–6.2M
8.
A zebrafish and mouse model for selective pruritus via direct activation of TRPA1
Kali Esancy, Logan Condon, Jing Feng, Corinna Kimball, Andrew Curtright, Ajay Dhaka
eLife. 2018; 7: e32036. Published online 2018 Mar 21. doi: 10.7554/eLife.32036
PMCID:
PMC5912907
AbstractArticlePDF–2.8M
9.
A hypomorphic inherited pathogenic variant in DDX3X causes male intellectual disability with additional neurodevelopmental and neurodegenerative features
Georgios Kellaris, Kamal Khan, Shahid M. Baig, I-Chun Tsai, Francisca Millan Zamora, Paul Ruggieri, Marvin R. Natowicz, Nicholas Katsanis
Hum Genomics. 2018; 12: 11. Published online 2018 Mar 1. doi: 10.1186/s40246-018-0141-y
PMCID:
PMC5831694
AbstractArticlePDF–1.0M
10.
RFX transcription factors are essential for hearing in mice
Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano
Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549
PMCID:
PMC4634137
AbstractArticlePDF–5.5M
11.
The zebrafish reference genome sequence and its relationship to the human genome
Kerstin Howe, Matthew D. Clark, Carlos F. Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E. Collins, Sean Humphray, Karen McLaren, Lucy Matthews, Stuart McLaren, Ian Sealy, Mario Caccamo, Carol Churcher, Carol Scott, Jeffrey C. Barrett, Romke Koch, Gerd-Jörg Rauch, Simon White, William Chow, Britt Kilian, Leonor T. Quintais, José A. Guerra-Assunção, Yi Zhou, Yong Gu, Jennifer Yen, Jan-Hinnerk Vogel, Tina Eyre, Seth Redmond, Ruby Banerjee, Jianxiang Chi, Beiyuan Fu, Elizabeth Langley, Sean F. Maguire, Gavin K. Laird, David Lloyd, Emma Kenyon, Sarah Donaldson, Harminder Sehra, Jeff Almeida-King, Jane Loveland, Stephen Trevanion, Matt Jones, Mike Quail, Dave Willey, Adrienne Hunt, John Burton, Sarah Sims, Kirsten McLay, Bob Plumb, Joy Davis, Chris Clee, Karen Oliver, Richard Clark, Clare Riddle, David Eliott, Glen Threadgold, Glenn Harden, Darren Ware, Beverly Mortimer, Giselle Kerry, Paul Heath, Benjamin Phillimore, Alan Tracey, Nicole Corby, Matthew Dunn, Christopher Johnson, Jonathan Wood, Susan Clark, Sarah Pelan, Guy Griffiths, Michelle Smith, Rebecca Glithero, Philip Howden, Nicholas Barker, Christopher Stevens, Joanna Harley, Karen Holt, Georgios Panagiotidis, Jamieson Lovell, Helen Beasley, Carl Henderson, Daria Gordon, Katherine Auger, Deborah Wright, Joanna Collins, Claire Raisen, Lauren Dyer, Kenric Leung, Lauren Robertson, Kirsty Ambridge, Daniel Leongamornlert, Sarah McGuire, Ruth Gilderthorp, Coline Griffiths, Deepa Manthravadi, Sarah Nichol, Gary Barker, Siobhan Whitehead, Michael Kay, Jacqueline Brown, Clare Murnane, Emma Gray, Matthew Humphries, Neil Sycamore, Darren Barker, David Saunders, Justene Wallis, Anne Babbage, Sian Hammond, Maryam Mashreghi-Mohammadi, Lucy Barr, Sancha Martin, Paul Wray, Andrew Ellington, Nicholas Matthews, Matthew Ellwood, Rebecca Woodmansey, Graham Clark, James Cooper, Anthony Tromans, Darren Grafham, Carl Skuce, Richard Pandian, Robert Andrews, Elliot Harrison, Andrew Kimberley, Jane Garnett, Nigel Fosker, Rebekah Hall, Patrick Garner, Daniel Kelly, Christine Bird, Sophie Palmer, Ines Gehring, Andrea Berger, Christopher M. Dooley, Zübeyde Ersan-Ürün, Cigdem Eser, Horst Geiger, Maria Geisler, Lena Karotki, Anette Kirn, Judith Konantz, Martina Konantz, Martina Oberländer, Silke Rudolph-Geiger, Mathias Teucke, Kazutoyo Osoegawa, Baoli Zhu, Amanda Rapp, Sara Widaa, Cordelia Langford, Fengtang Yang, Nigel P. Carter, Jennifer Harrow, Zemin Ning, Javier Herrero, Steve M. J. Searle, Anton Enright, Robert Geisler, Ronald H. A. Plasterk, Charles Lee, Monte Westerfield, Pieter J. de Jong, Leonard I. Zon, John H. Postlethwait, Christiane Nüsslein-Volhard, Tim J. P. Hubbard, Hugues Roest Crollius, Jane Rogers, Derek L. Stemple
Nature. Author manuscript; available in PMC 2014 Apr 25.
Published in final edited form as: Nature. 2013 Apr 25; 496(7446): 498–503. Published online 2013 Apr 17. doi: 10.1038/nature12111
Correction in:
volume 505 on page 248
PMCID:
PMC3703927
AbstractArticlePDF–1.5M
12.
Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation
Rachel Lockridge Mueller, Cheng Huang, Robert K Ho
BMC Genomics. 2010; 11: 492. Published online 2010 Sep 9. doi: 10.1186/1471-2164-11-492
PMCID:
PMC2996988
AbstractArticlePDF–1.5M
13.
Hematopoietic gene expression profile in zebrafish kidney marrow
Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen
Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101
PMCID:
PMC528959
AbstractArticlePDF–551K
14.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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