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Items: 12

1.
RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio
Madhu Sudhana Saddala, Anton Lennikov, Adam Bouras, Hu Huang
BMC Genomics. 2020; 21: 132. Published online 2020 Feb 7. doi: 10.1186/s12864-020-6550-z
PMCID:
PMC7006399
AbstractArticlePDF–2.2M
2.
Non-canonical translation via deadenylated 3′UTRs maintains primordial germ cells
Youngnam N. Jin, Peter J. Schlueter, Nathalie Jurisch-Yaksi, Pui-Ying Lam, Shan Jin, Woong Y. Hwang, Jing-Ruey Joanna Yeh, Masaaki Yoshigi, Shao-En Ong, Monica Schenone, Christina R. Hartigan, Steven A. Carr, Randall T. Peterson
Nat Chem Biol. Author manuscript; available in PMC 2019 Oct 18.
Published in final edited form as: Nat Chem Biol. 2018 Sep; 14(9): 844–852. Published online 2018 Jul 9. doi: 10.1038/s41589-018-0098-0
PMCID:
PMC6800240
AbstractArticlePDF–1.3M
3.
Extracellular Pgk1 enhances neurite outgrowth of motoneurons through Nogo66/NgR-independent targeting of NogoA
Cheng Yung Lin, Chia Lun Wu, Kok Zhi Lee, You Jei Chen, Po Hsiang Zhang, Chia Yu Chang, Horng Jyh Harn, Shinn Zong Lin, Huai Jen Tsai
eLife. 2019; 8: e49175. Published online 2019 Jul 30. doi: 10.7554/eLife.49175
PMCID:
PMC6667276
AbstractArticlePDF–5.0M
4.
Tumor suppressor RARRES1 links tubulin deglutamylation to mitochondrial metabolism and cell survival
Sara Maimouni, Mi-Hye Lee, You-Me Sung, Michael Hall, Arpita Roy, Chokri Ouaari, Yoo-Seok Hwang, Justin Spivak, Eric Glasgow, Matthew Swift, Jay Patel, Amrita Cheema, Deepak Kumar, Stephen Byers
Oncotarget. 2019 Feb 26; 10(17): 1606–1624. Published online 2019 Feb 26. doi: 10.18632/oncotarget.26600
Correction in:
Oncotarget. 2021 Oct 26; 12(22): 2305–2306.
PMCID:
PMC6422194
AbstractArticlePDF–3.4M
5.
GRIBCG: a software for selection of sgRNAs in the design of balancer chromosomes
Brian B. Merritt, Lily S. Cheung
BMC Bioinformatics. 2019; 20: 122. Published online 2019 Mar 12. doi: 10.1186/s12859-019-2712-x
PMCID:
PMC6416924
AbstractArticlePDF–1.4M
6.
Impaired AMPA receptor trafficking by a double knockout of zebrafish olfactomedin1a/b
Naoki Nakaya, Afia Sultana, Stanislav I. Tomarev
J Neurochem. Author manuscript; available in PMC 2018 Dec 1.
Published in final edited form as: J Neurochem. 2017 Dec; 143(6): 635–644. Published online 2017 Nov 6. doi: 10.1111/jnc.14231
PMCID:
PMC5729082
AbstractArticlePDF–1.2M
7.
Bioenergetic status modulates motor neuron vulnerability and pathogenesis in a zebrafish model of spinal muscular atrophy
Penelope J. Boyd, Wen-Yo Tu, Hannah K. Shorrock, Ewout J. N. Groen, Roderick N. Carter, Rachael A. Powis, Sophie R. Thomson, Derek Thomson, Laura C. Graham, Anna A. L. Motyl, Thomas M. Wishart, J. Robin Highley, Nicholas M. Morton, Thomas Becker, Catherina G. Becker, Paul R. Heath, Thomas H. Gillingwater
PLoS Genet. 2017 Apr; 13(4): e1006744. Published online 2017 Apr 20. doi: 10.1371/journal.pgen.1006744
PMCID:
PMC5417717
AbstractArticlePDF–27M
8.
Evolution of complexity in the zebrafish synapse proteome
Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant
Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613
PMCID:
PMC5337974
AbstractArticlePDF–2.0M
9.
The zebrafish reference genome sequence and its relationship to the human genome
Kerstin Howe, Matthew D. Clark, Carlos F. Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E. Collins, Sean Humphray, Karen McLaren, Lucy Matthews, Stuart McLaren, Ian Sealy, Mario Caccamo, Carol Churcher, Carol Scott, Jeffrey C. Barrett, Romke Koch, Gerd-Jörg Rauch, Simon White, William Chow, Britt Kilian, Leonor T. Quintais, José A. Guerra-Assunção, Yi Zhou, Yong Gu, Jennifer Yen, Jan-Hinnerk Vogel, Tina Eyre, Seth Redmond, Ruby Banerjee, Jianxiang Chi, Beiyuan Fu, Elizabeth Langley, Sean F. Maguire, Gavin K. Laird, David Lloyd, Emma Kenyon, Sarah Donaldson, Harminder Sehra, Jeff Almeida-King, Jane Loveland, Stephen Trevanion, Matt Jones, Mike Quail, Dave Willey, Adrienne Hunt, John Burton, Sarah Sims, Kirsten McLay, Bob Plumb, Joy Davis, Chris Clee, Karen Oliver, Richard Clark, Clare Riddle, David Eliott, Glen Threadgold, Glenn Harden, Darren Ware, Beverly Mortimer, Giselle Kerry, Paul Heath, Benjamin Phillimore, Alan Tracey, Nicole Corby, Matthew Dunn, Christopher Johnson, Jonathan Wood, Susan Clark, Sarah Pelan, Guy Griffiths, Michelle Smith, Rebecca Glithero, Philip Howden, Nicholas Barker, Christopher Stevens, Joanna Harley, Karen Holt, Georgios Panagiotidis, Jamieson Lovell, Helen Beasley, Carl Henderson, Daria Gordon, Katherine Auger, Deborah Wright, Joanna Collins, Claire Raisen, Lauren Dyer, Kenric Leung, Lauren Robertson, Kirsty Ambridge, Daniel Leongamornlert, Sarah McGuire, Ruth Gilderthorp, Coline Griffiths, Deepa Manthravadi, Sarah Nichol, Gary Barker, Siobhan Whitehead, Michael Kay, Jacqueline Brown, Clare Murnane, Emma Gray, Matthew Humphries, Neil Sycamore, Darren Barker, David Saunders, Justene Wallis, Anne Babbage, Sian Hammond, Maryam Mashreghi-Mohammadi, Lucy Barr, Sancha Martin, Paul Wray, Andrew Ellington, Nicholas Matthews, Matthew Ellwood, Rebecca Woodmansey, Graham Clark, James Cooper, Anthony Tromans, Darren Grafham, Carl Skuce, Richard Pandian, Robert Andrews, Elliot Harrison, Andrew Kimberley, Jane Garnett, Nigel Fosker, Rebekah Hall, Patrick Garner, Daniel Kelly, Christine Bird, Sophie Palmer, Ines Gehring, Andrea Berger, Christopher M. Dooley, Zübeyde Ersan-Ürün, Cigdem Eser, Horst Geiger, Maria Geisler, Lena Karotki, Anette Kirn, Judith Konantz, Martina Konantz, Martina Oberländer, Silke Rudolph-Geiger, Mathias Teucke, Kazutoyo Osoegawa, Baoli Zhu, Amanda Rapp, Sara Widaa, Cordelia Langford, Fengtang Yang, Nigel P. Carter, Jennifer Harrow, Zemin Ning, Javier Herrero, Steve M. J. Searle, Anton Enright, Robert Geisler, Ronald H. A. Plasterk, Charles Lee, Monte Westerfield, Pieter J. de Jong, Leonard I. Zon, John H. Postlethwait, Christiane Nüsslein-Volhard, Tim J. P. Hubbard, Hugues Roest Crollius, Jane Rogers, Derek L. Stemple
Nature. Author manuscript; available in PMC 2014 Apr 25.
Published in final edited form as: Nature. 2013 Apr 25; 496(7446): 498–503. Published online 2013 Apr 17. doi: 10.1038/nature12111
Correction in:
volume 505 on page 248
PMCID:
PMC3703927
AbstractArticlePDF–1.5M
10.
The cytokine macrophage migration inhibitory factor (MIF) acts as a neurotrophin in the developing inner ear of the zebrafish, Danio rerio
Yu-chi Shen, Deborah L. Thompson, Meng-Kiat Kuah, Kah-Loon Wong, Karen L. Wu, Stephanie A. Linn, Ethan M. Jewett, Alexander Chong Shu-Chien, Kate F. Barald
Dev Biol. Author manuscript; available in PMC 2013 Mar 1.
Published in final edited form as: Dev Biol. 2012 Mar 1; 363(1): 84–94. Published online 2011 Dec 22. doi: 10.1016/j.ydbio.2011.12.023
PMCID:
PMC3288529
AbstractArticlePDF–4.0M
11.
The zebrafish gene map defines ancestral vertebrate chromosomes
Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot
Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305
PMCID:
PMC1199546
AbstractArticlePDF–595K
12.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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