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Items: 1 to 20 of 38

1.
Stereospecificity control in aminoacyl-tRNA-synthetases: new evidence of d-amino acids activation and editing
Mariia Yu Rybak, Alexey V Rayevsky, Olga I Gudzera, Michael A Tukalo
Nucleic Acids Res. 2019 Oct 10; 47(18): 9777–9788. Published online 2019 Sep 3. doi: 10.1093/nar/gkz756
PMCID:
PMC6765224
AbstractArticlePDF–2.7M
2.
Complete Genome Sequencing of Thermus thermophilus Strain HC11, Isolated from Mine Geyser in Japan
Kentaro Miyazaki
Microbiol Resour Announc. 2019 Sep; 8(39): e00873-19. Published online 2019 Sep 26. doi: 10.1128/MRA.00873-19
PMCID:
PMC6763646
AbstractArticlePDF–525K
3.
Large-scale sequence comparisons with sourmash
N. Tessa Pierce, Luiz Irber, Taylor Reiter, Phillip Brooks, C. Titus Brown
Version 1. F1000Res. 2019; 8: 1006. Published online 2019 Jul 4. doi: 10.12688/f1000research.19675.1
PMCID:
PMC6720031
AbstractArticlePDF–1.5M
4.
Co-utilization of glucose and xylose by evolved Thermus thermophilus LC113 strain elucidated by 13C metabolic flux analysis and whole genome sequencing
Lauren T. Cordova, Jing Lu, Robert M. Cipolla, Nicholas R. Sandoval, Christopher P. Long, Maciek R. Antoniewicz
Metab Eng. Author manuscript; available in PMC 2018 Mar 10.
Published in final edited form as: Metab Eng. 2016 Sep; 37: 63–71. Published online 2016 May 7. doi: 10.1016/j.ymben.2016.05.001
PMCID:
PMC5845448
AbstractArticlePDF–1.4M
5.
Complete Genome Analysis of Thermus parvatiensis and Comparative Genomics of Thermus spp. Provide Insights into Genetic Variability and Evolution of Natural Competence as Strategic Survival Attributes
Charu Tripathi, Harshita Mishra, Himani Khurana, Vatsala Dwivedi, Komal Kamra, Ram K. Negi, Rup Lal
Front Microbiol. 2017; 8: 1410. Published online 2017 Jul 27. doi: 10.3389/fmicb.2017.01410
PMCID:
PMC5529391
AbstractArticlePDF–5.3M
6.
Physiological Properties and Genome Structure of the Hyperthermophilic Filamentous Phage φOH3 Which Infects Thermus thermophilus HB8
Yuko Nagayoshi, Kenta Kumagae, Kazuki Mori, Kosuke Tashiro, Ayano Nakamura, Yasuhiro Fujino, Yasuaki Hiromasa, Takeo Iwamoto, Satoru Kuhara, Toshihisa Ohshima, Katsumi Doi
Front Microbiol. 2016; 7: 50. Published online 2016 Feb 23. doi: 10.3389/fmicb.2016.00050
PMCID:
PMC4763002
AbstractArticlePDF–1.9M
7.
Characterization of a Mannose-6-Phosphate Isomerase from Bacillus amyloliquefaciens and Its Application in Fructose-6-Phosphate Production
Sujan Sigdel, Ranjitha Singh, Tae-Su Kim, Jinglin Li, Sang-Yong Kim, In-Won Kim, Woo-Suk Jung, Cheol-Ho Pan, Yun Chan Kang, Jung-Kul Lee
PLoS One. 2015; 10(7): e0131585. Published online 2015 Jul 14. doi: 10.1371/journal.pone.0131585
PMCID:
PMC4718643
AbstractArticlePDF–1.1M
8.
Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species
Benjamin Kumwenda, Derek Litthauer, Oleg Reva
BMC Genomics. 2014; 15(1): 813. Published online 2014 Sep 25. doi: 10.1186/1471-2164-15-813
PMCID:
PMC4180962
AbstractArticlePDF–3.0M
9.
Lysine Propionylation Is a Prevalent Post-translational Modification in Thermus thermophilus
Hiroki Okanishi, Kwang Kim, Ryoji Masui, Seiki Kuramitsu
Mol Cell Proteomics. 2014 Sep; 13(9): 2382–2398. Published online 2014 Jun 17. doi: 10.1074/mcp.M113.035659
PMCID:
PMC4159656
AbstractArticlePDF–2.4M
10.
Analysis of the mechanism of nucleosome survival during transcription
Han-Wen Chang, Olga I. Kulaeva, Alexey K. Shaytan, Mikhail Kibanov, Konstantin Kuznedelov, Konstantin V. Severinov, Mikhail P. Kirpichnikov, David J. Clark, Vasily M. Studitsky
Nucleic Acids Res. 2014 Feb; 42(3): 1619–1627. Published online 2013 Nov 13. doi: 10.1093/nar/gkt1120
PMCID:
PMC3919589
AbstractArticlePDF–5.1M
11.
Analysis of Protein Thermostability Enhancing Factors in Industrially Important Thermus Bacteria Species
Benjamin Kumwenda, Derek Litthauer, Özlem Tastan Bishop, Oleg Reva
Evol Bioinform Online. 2013; 9: 327–342. Published online 2013 Aug 18. doi: 10.4137/EBO.S12539
PMCID:
PMC3762613
AbstractArticlePDF–1.2M
12.
Transposition of an insertion sequence, ISTth7, in the genome of the extreme thermophile Thermus thermophilus HB8
Steven T. Gregory, Albert E. Dahlberg
FEMS Microbiol Lett. Author manuscript; available in PMC 2013 May 3.
Published in final edited form as: FEMS Microbiol Lett. 2008 Dec; 289(2): 187–192. Published online 2008 Oct 28. doi: 10.1111/j.1574-6968.2008.01389.x
PMCID:
PMC3643509
AbstractArticlePDF–692K
13.
Systematic Functional Comparative Analysis of Four Single-Stranded DNA-Binding Proteins and Their Affection on Viral RNA Metabolism
Haiyan Shi, Yonghui Zhang, Guohui Zhang, Jinlei Guo, Xun Zhang, Haiyan Song, Jianxin Lv, Jimin Gao, Yuepeng Wang, Litian Chen, Yue Wang
PLoS One. 2013; 8(1): e55076. Published online 2013 Jan 24. doi: 10.1371/journal.pone.0055076
Correction in:
PLoS One. 2013; 8(8): 10.1371/annotation/b45ca472-8c85-407c-90e4-59f0aff300ea.
PMCID:
PMC3554691
AbstractArticlePDF–931K
14.
Corallopyronin A Specifically Targets and Depletes Essential Obligate Wolbachia Endobacteria From Filarial Nematodes In Vivo
Andrea Schiefer, Alexander Schmitz, Till F. Schäberle, Sabine Specht, Christine Lämmer, Kelly L. Johnston, Dmitry G. Vassylyev, Gabriele M. König, Achim Hoerauf, Kenneth Pfarr
J Infect Dis. 2012 Jul 15; 206(2): 249–257. Published online 2012 May 14. doi: 10.1093/infdis/jis341
PMCID:
PMC3490692
AbstractArticlePDF–426K
15.
Capreomycin susceptibility is increased by TlyA-directed 2′-O-methylation on both ribosomal subunits
Tanakarn Monshupanee, Shanna K. Johansen, Albert E. Dahlberg, Stephen Douthwaite
Mol Microbiol. Author manuscript; available in PMC 2013 Sep 1.
Published in final edited form as: Mol Microbiol. 2012 Sep; 85(6): 1194–1203. Published online 2012 Aug 1. doi: 10.1111/j.1365-2958.2012.08168.x
PMCID:
PMC3438285
AbstractArticlePDF–3.9M
16.
Draft Genome Sequence of Thermus sp. Strain RL, Isolated from a Hot Water Spring Located atop the Himalayan Ranges at Manikaran, India
Vatsala Dwivedi, Naseer Sangwan, Aeshna Nigam, Nidhi Garg, Neha Niharika, Paramjit Khurana, Jitendra P. Khurana, Rup Lal
J Bacteriol. 2012 Jul; 194(13): 3534. doi: 10.1128/JB.00604-12
PMCID:
PMC3434741
AbstractArticlePDF–88K
17.
Identification and Characterization of the Thermus thermophilus 5-Methylcytidine (m5C) Methyltransferase Modifying 23 S Ribosomal RNA (rRNA) Base C1942
Line H. G. Larsen, Anette Rasmussen, Anders M. B. Giessing, Gerwald Jogl, Finn Kirpekar
J Biol Chem. 2012 Aug 10; 287(33): 27593–27600. Published online 2012 Jun 18. doi: 10.1074/jbc.M112.376160
PMCID:
PMC3431712
AbstractArticlePDF–1.5M
18.
Transcriptional Repression Mediated by a TetR Family Protein, PfmR, from Thermus thermophilus HB8
Yoshihiro Agari, Keiko Sakamoto, Seiki Kuramitsu, Akeo Shinkai
J Bacteriol. 2012 Sep; 194(17): 4630–4641. doi: 10.1128/JB.00668-12
PMCID:
PMC3415517
AbstractArticlePDF–2.2M
19.
A genome-wide view of the expression and processing patterns of Thermus thermophilus HB8 CRISPR RNAs
Stefan Juranek, Tali Eban, Yael Altuvia, Miguel Brown, Pavel Morozov, Thomas Tuschl, Hanah Margalit
RNA. 2012 Apr; 18(4): 783–794. doi: 10.1261/rna.031468.111
PMCID:
PMC3312565
AbstractArticlePDF–2.0M
20.
Genomic and proteomic characterization of the large Myoviridae bacteriophage ϕTMA of the extreme thermophile Thermus thermophilus
Masatada Tamakoshi, Aya Murakami, Motoki Sugisawa, Kenji Tsuneizumi, Shigeki Takeda, Toshihiko Saheki, Takashi Izumi, Toshihiko Akiba, Kaoru Mitsuoka, Hidehiro Toh, Atsushi Yamashita, Fumio Arisaka, Masahira Hattori, Tairo Oshima, Akihiko Yamagishi
Bacteriophage. 2011 May-Jun; 1(3): 152–164. Published online 2011 May 1. doi: 10.4161/bact.1.3.16712
PMCID:
PMC3225780
AbstractArticlePDF–4.5M

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