Full text in PMC (nucleotide) for Gene (Select 1443951) - PMC

Xiaoying Wang, Ryogo Akasaka, Chie Takemoto, Satoshi Morita, Machiko Yamaguchi, Takaho Terada, Mikako Shirozu, Shigeyuki Yokoyama, Shilin Chen, Shuyi Si, Yong Xie

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1; 67(Pt 12): 1551–1555. Published online 2011 Nov 25. doi: 10.1107/S174430911104108X

PMCID:: PMC3232137

Abstract Article PDF–784K

Select item 31871806.

Defining Components of the Chromosomal Origin of Replication of the Hyperthermophilic Archaeon Pyrococcus furiosus Needed for Construction of a Stable Replicating Shuttle Vector

Joel Farkas, Daehwan Chung, Megan DeBarry, Michael W. W. Adams, Janet Westpheling

Appl Environ Microbiol. 2011 Sep; 77(18): 6343–6349. doi: 10.1128/AEM.05057-11

PMCID:: PMC3187180

Abstract Article PDF–814K

Select item 30410017.

Mapping of origin of replication in Themococcales

Krishna K Ojha, D Swati

Bioinformation. 2010; 5(5): 213–218. Published online 2010 Nov 1. doi: 10.6026/97320630005213

PMCID:: PMC3041001

Abstract Article PDF–347K

Select item 26855678.

Remarkable sequence signatures in archaeal genomes

Ahmed Fadiel, Stuart Lithwick, Gopi Ganji, Stephen W. Scherer

Archaea. 2003 Oct; 1(3): 185–190. Published online 2003 Feb 19. doi: 10.1155/2003/458235

PMCID:: PMC2685567

Abstract Article PDF–118K

Select item 26855489.

Identification of replication origins in archaeal genomes based on the Z-curve method

Ren Zhang, Chun-Ting Zhang

Archaea. 2005 May; 1(5): 335–346. Published online 2004 Nov 9. doi: 10.1155/2005/509646

PMCID:: PMC2685548

Abstract Article PDF–228K

Select item 248068610.

Prokaryotic Gene Finding Based on Physicochemical Characteristics of Codons Calculated from Molecular Dynamics Simulations

Poonam Singhal, B. Jayaram, Surjit B. Dixit, David L. Beveridge

Biophys J. 2008 Jun 1; 94(11): 4173–4183. Published online 2008 Mar 7. doi: 10.1529/biophysj.107.116392

PMCID:: PMC2480686

Abstract Article PDF–780K

Select item 185488811.

Modelling the evolution of the archeal tryptophan synthase

Rainer Merkl

BMC Evol Biol. 2007; 7: 59. Published online 2007 Apr 10. doi: 10.1186/1471-2148-7-59

PMCID:: PMC1854888

Abstract Article PDF–576K

Select item 184737612.

Insertion Sequence Diversity in Archaea

J. Filée, P. Siguier, M. Chandler

Microbiol Mol Biol Rev. 2007 Mar; 71(1): 121–157. doi: 10.1128/MMBR.00031-06

PMCID:: PMC1847376

Abstract Article PDF–2.7M

Select item 139782013.

Highly expressed proteins have an increased frequency of alanine in the second amino acid position

Age Tats, Maido Remm, Tanel Tenson

BMC Genomics. 2006; 7: 28. Published online 2006 Feb 16. doi: 10.1186/1471-2164-7-28

PMCID:: PMC1397820

Abstract Article PDF–1.2M

Select item 127095114.

Predicting candidate genomic sequences that correspond to synthetic functional RNA motifs

Uri Laserson, Hin Hark Gan, Tamar Schlick

Nucleic Acids Res. 2005; 33(18): 6057–6069. Published online 2005 Oct 27. doi: 10.1093/nar/gki911

PMCID:: PMC1270951

Abstract Article PDF–691K

Select item 116025815.

MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes

Stéphane Cruveiller, Jérôme Le Saux, David Vallenet, Aurélie Lajus, Stéphanie Bocs, Claudine Médigue

Nucleic Acids Res. 2005 Jul 1; 33(Web Server issue): W471–W479. Published online 2005 Jun 27. doi: 10.1093/nar/gki498

PMCID:: PMC1160258

Abstract Article PDF–375K

Select item 55156116.

Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes

Toshiaki Fukui, Haruyuki Atomi, Tamotsu Kanai, Rie Matsumi, Shinsuke Fujiwara, Tadayuki Imanaka

Genome Res. 2005 Mar; 15(3): 352–363. doi: 10.1101/gr.3003105

PMCID:: PMC551561

Abstract Article PDF–501K

Select item 53387117.

A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land

Fabia U Battistuzzi, Andreia Feijao, S Blair Hedges

BMC Evol Biol. 2004; 4: 44. Published online 2004 Nov 9. doi: 10.1186/1471-2148-4-44

PMCID:: PMC533871

Abstract Article PDF–593K

Select item 39431418.

SIGI: score-based identification of genomic islands

Rainer Merkl

BMC Bioinformatics. 2004; 5: 22. Published online 2004 Mar 3. doi: 10.1186/1471-2105-5-22

PMCID:: PMC394314

Abstract Article PDF–588K

Select item 13961319.

Correlations between Shine-Dalgarno Sequences and Gene Features Such as Predicted Expression Levels and Operon Structures

Jiong Ma, Allan Campbell, Samuel Karlin

J Bacteriol. 2002 Oct; 184(20): 5733–5745. doi: 10.1128/JB.184.20.5733-5745.2002

PMCID:: PMC139613

Abstract Article PDF–243K

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