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Items: 1 to 20 of 116

1.
Transition-state stabilization in Escherichia coli ribonuclease P RNA-mediated cleavage of model substrates
Shiying Wu, Yu Chen, Guanzhong Mao, Stefan Trobro, Marek Kwiatkowski, Leif A. Kirsebom
Nucleic Acids Res. 2014 Jan 1; 42(1): 631–642. Published online 2013 Oct 3. doi: 10.1093/nar/gkt853
PMCID:
PMC3874170
ArticlePDF–3.3M
2.
Structural basis of a ribozyme's thermostability: P1–L9 interdomain interaction in RNase P RNA
Michal Marszalkowski, Dagmar K. Willkomm, Roland K. Hartmann
RNA. 2008 Jan; 14(1): 127–133. doi: 10.1261/rna.762508
PMCID:
PMC2151030
ArticlePDF–482K
3.
Structural basis for altering the stability of homologous RNAs from a mesophilic and a thermophilic bacterium
NATHAN J. BAIRD, NARAYANAN SRIVIDYA, ANDREY S. KRASILNIKOV, ALFONSO MONDRAGÓN, TOBIN R. SOSNICK, TAO PAN
RNA. 2006 Apr; 12(4): 598–606. doi: 10.1261/rna.2186506
PMCID:
PMC1421087
ArticlePDF–803K
4.
Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
M Schmitz, I Tinoco, Jr
RNA. 2000 Sep; 6(9): 1212–1225. doi: 10.1017/s1355838200000881
PMCID:
PMC1369995
SummaryPDF–3.0M
5.
Helix P4 is a divalent metal ion binding site in the conserved core of the ribonuclease P ribozyme.
E L Christian, N M Kaye, M E Harris
RNA. 2000 Apr; 6(4): 511–519. doi: 10.1017/s1355838200000042
PMCID:
PMC1369932
SummaryPDF–375K
6.
Multiple binding modes of substrate to the catalytic RNA subunit of RNase P from Escherichia coli.
D A Pomeranz Krummel, S Altman
RNA. 1999 Aug; 5(8): 1021–1033. doi: 10.1017/s1355838299990416
PMCID:
PMC1369826
SummaryPDF–920K
7.
The P15-loop of Escherichia coli RNase P RNA is an autonomous divalent metal ion binding domain.
J Kufel, L A Kirsebom
RNA. 1998 Jul; 4(7): 777–788. doi: 10.1017/s1355838298970923
PMCID:
PMC1369658
SummaryPDF–655K
8.
The protein cofactor allows the sequence of an RNase P ribozyme to diversify by maintaining the catalytically active structure of the enzyme.
J J Kim, A F Kilani, X Zhan, S Altman, F Liu
RNA. 1997 Jun; 3(6): 613–623.
PMCID:
PMC1369510
SummaryPDF–29M
9.
Ribonuclease P RNA: models of the 15/16 bulge from Escherichia coli and the P15 stem loop of Bacillus subtilis.
T R Easterwood, S C Harvey
RNA. 1997 Jun; 3(6): 577–585.
PMCID:
PMC1369507
SummaryPDF–30M
10.
In vitro selection of RNase P RNA reveals optimized catalytic activity in a highly conserved structural domain.
D N Frank, A E Ellington, N R Pace
RNA. 1996 Dec; 2(12): 1179–1188.
PMCID:
PMC1369446
SummaryPDF–7.7M
11.
Slow folding kinetics of RNase P RNA.
P P Zarrinkar, J Wang, J R Williamson
RNA. 1996 Jun; 2(6): 564–573.
PMCID:
PMC1369395
SummaryPDF–5.4M
12.
Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs.
J L Chen, J M Nolan, M E Harris, N R Pace
EMBO J. 1998 Mar 2; 17(5): 1515–1525. doi: 10.1093/emboj/17.5.1515
PMCID:
PMC1170499
SummaryPDF–710K
13.
Mutations affecting two distinct functions of the RNA component of RNase P.
H Shiraishi, Y Shimura
EMBO J. 1986 Dec 20; 5(13): 3673–3679. doi: 10.1002/j.1460-2075.1986.tb04698.x
PMCID:
PMC1167409
ArticlePDF–1.6M
14.
Studies on Escherichia coli RNase P RNA with Zn2+ as the catalytic cofactor
Simona Cuzic, Roland K. Hartmann
Nucleic Acids Res. 2005; 33(8): 2464–2474. Published online 2005 May 2. doi: 10.1093/nar/gki540
PMCID:
PMC1088067
ArticlePDF–654K
15.
Complementation of an RNase P RNA (rnpB) gene deletion in Escherichia coli by homologous genes from distantly related eubacteria.
D S Waugh, N R Pace
J Bacteriol. 1990 Nov; 172(11): 6316–6322. doi: 10.1128/jb.172.11.6316-6322.1990
PMCID:
PMC526815
ArticlePDF–1.3M
16.
Cross talk between the +73/294 interaction and the cleavage site in RNase P RNA mediated cleavage
Mathias Brännvall, Ema Kikovska, Leif A. Kirsebom
Nucleic Acids Res. 2004; 32(18): 5418–5429. Published online 2004 Oct 11. doi: 10.1093/nar/gkh883
PMCID:
PMC524293
ArticlePDF–365K
17.
Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA.
M E Harris, J M Nolan, A Malhotra, J W Brown, S C Harvey, N R Pace
EMBO J. 1994 Sep 1; 13(17): 3953–3963. doi: 10.1002/j.1460-2075.1994.tb06711.x
PMCID:
PMC395315
ArticlePDF–2.8M
18.
Processing of transcription products of the gene encoding the RNA component of RNase P.
H Sakamoto, N Kimura, Y Shimura
Proc Natl Acad Sci U S A. 1983 Oct; 80(20): 6187–6191. doi: 10.1073/pnas.80.20.6187
PMCID:
PMC394260
ArticlePDF–1.7M
19.
Affinity chromatography with an immobilized RNA enzyme.
A Vioque, S Altman
Proc Natl Acad Sci U S A. 1986 Aug; 83(16): 5904–5908. doi: 10.1073/pnas.83.16.5904
PMCID:
PMC386405
ArticlePDF–1.4M
20.
Identification of a precursor molecular for the RNA moiety of the processing enzyme RNase P.
M Gurevitz, S K Jain, D Apirion
Proc Natl Acad Sci U S A. 1983 Jul; 80(14): 4450–4454. doi: 10.1073/pnas.80.14.4450
PMCID:
PMC384056
ArticlePDF–2.0M

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