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Items: 1 to 20 of 62

1.
Microarray Profiling of Phage-Display Selections for Rapid Mapping of Transcription Factor–DNA Interactions
Gordon Freckleton, Soyeon I. Lippman, James R. Broach, Saeed Tavazoie
PLoS Genet. 2009 Apr; 5(4): e1000449. Published online 2009 Apr 10. doi: 10.1371/journal.pgen.1000449
PMCID:
PMC2659770
ArticlePDF–614K
2.
Decoupling yeast cell division and stress defense implicates mRNA repression in translational reallocation during stress
Yi-Hsuan Ho, Evgenia Shishkova, James Hose, Joshua J. Coon, Audrey P. Gasch
Curr Biol. Author manuscript; available in PMC 2019 Aug 20.
Published in final edited form as: Curr Biol. 2018 Aug 20; 28(16): 2673–2680.e4. Published online 2018 Aug 2. doi: 10.1016/j.cub.2018.06.044
PMCID:
PMC6132260
ArticlePDF–1.8M
3.
Protein kinase A and TORC1 activate genes for ribosomal biogenesis by inactivating repressors encoded by Dot6 and its homolog Tod6
Soyeon I. Lippman, James R. Broach
Proc Natl Acad Sci U S A. 2009 Nov 24; 106(47): 19928–19933. Published online 2009 Nov 9. doi: 10.1073/pnas.0907027106
PMCID:
PMC2775034
ArticlePDF–7.2M
4.
A dynamic model of proteome changes reveals new roles for transcript alteration in yeast
M Violet Lee, Scott E Topper, Shane L Hubler, James Hose, Craig D Wenger, Joshua J Coon, Audrey P Gasch
Mol Syst Biol. 2011; 7: 514. Published online 2011 Jul 19. doi: 10.1038/msb.2011.48
PMCID:
PMC3159980
ArticlePDF–1.8M
5.
Coordinated regulation of sulfur and phospholipid metabolism reflects the importance of methylation in the growth of yeast
Mark J. Hickman, Allegra A. Petti, Olivia Ho-Shing, Sanford J. Silverman, R. Scott McIsaac, Traci A. Lee, David Botstein
Mol Biol Cell. 2011 Nov 1; 22(21): 4192–4204. doi: 10.1091/mbc.E11-05-0467
PMCID:
PMC3204079
ArticlePDF–678K
6.
Using Substrate-Binding Variants of the cAMP-Dependent Protein Kinase to Identify Novel Targets and a Kinase Domain Important for Substrate Interactions in Saccharomyces cerevisiae
Stephen J. Deminoff, Susie C. Howard, Arelis Hester, Sarah Warner, Paul K. Herman
Genetics. 2006 Aug; 173(4): 1909–1917. doi: 10.1534/genetics.106.059238
PMCID:
PMC1569720
ArticlePDF–395K
7.
Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress
Audrey P. Gasch, Feiqiao Brian Yu, James Hose, Leah E. Escalante, Mike Place, Rhonda Bacher, Jad Kanbar, Doina Ciobanu, Laura Sandor, Igor V. Grigoriev, Christina Kendziorski, Stephen R. Quake, Megan N. McClean
PLoS Biol. 2017 Dec; 15(12): e2004050. Published online 2017 Dec 14. doi: 10.1371/journal.pbio.2004050
PMCID:
PMC5746276
ArticlePDF–6.2M
8.
Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L
Alexandre Huber, Sarah L French, Hille Tekotte, Seda Yerlikaya, Michael Stahl, Mariya P Perepelkina, Mike Tyers, Jacques Rougemont, Ann L Beyer, Robbie Loewith
EMBO J. 2011 Aug 3; 30(15): 3052–3064. Published online 2011 Jul 5. doi: 10.1038/emboj.2011.221
PMCID:
PMC3160192
ArticlePDF–1.9M
9.
CRISPRi screens reveal genes modulating yeast growth in lignocellulose hydrolysate
Friederike Gutmann, Cosimo Jann, Filipa Pereira, Andreas Johansson, Lars M. Steinmetz, Kiran R. Patil
Biotechnol Biofuels. 2021; 14: 41. Published online 2021 Feb 10. doi: 10.1186/s13068-021-01880-7
PMCID:
PMC7874482
ArticlePDF–3.2M
10.
Distributed and dynamic intracellular organization of extracellular information
Alejandro A. Granados, Julian M. J. Pietsch, Sarah A. Cepeda-Humerez, Iseabail L. Farquhar, Gašper Tkačik, Peter S. Swain
Proc Natl Acad Sci U S A. 2018 Jun 5; 115(23): 6088–6093. Published online 2018 May 21. doi: 10.1073/pnas.1716659115
PMCID:
PMC6003323
ArticlePDF–1.3M
11.
Identification of high-copy disruptors of telomeric silencing in Saccharomyces cerevisiae.
M S Singer, A Kahana, A J Wolf, L L Meisinger, S E Peterson, C Goggin, M Mahowald, D E Gottschling
Genetics. 1998 Oct; 150(2): 613–632. doi: 10.1093/genetics/150.2.613
PMCID:
PMC1460361
SummaryPDF–3.3M
12.
Pulsatile Dynamics in the Yeast Proteome
Chiraj K. Dalal, Long Cai, Yihan Lin, Kasra Rahbar, Michael B. Elowitz
Curr Biol. Author manuscript; available in PMC 2015 Sep 22.
Published in final edited form as: Curr Biol. 2014 Sep 22; 24(18): 2189–2194. Published online 2014 Sep 11. doi: 10.1016/j.cub.2014.07.076
PMCID:
PMC4203654
ArticlePDF–985K
13.
Multiple Negative Regulators Restrict Recruitment of the SWI/SNF Chromatin Remodeler to the HO Promoter in Saccharomyces cerevisiae
Emily J. Parnell, David J. Stillman
Genetics. 2019 Aug; 212(4): 1181–1204. Published online 2019 Jun 5. doi: 10.1534/genetics.119.302359
PMCID:
PMC6707452
ArticlePDF–2.3M
14.
Silencing near tRNA genes is nucleosome-mediated and distinct from boundary element function
Paul D. Good, Ann Kendall, James Ignatz-Hoover, Erin L. Miller, Dave A. Pai, Sara R. Rivera, Brian Carrick, David R. Engelke
Gene. Author manuscript; available in PMC 2014 Aug 15.
Published in final edited form as: Gene. 2013 Aug 15; 526(1): 7–15. Published online 2013 May 23. doi: 10.1016/j.gene.2013.05.016
PMCID:
PMC3745993
ArticlePDF–1.3M
15.
Regulators of pseudohyphal differentiation in Saccharomyces cerevisiae identified through multicopy suppressor analysis in ammonium permease mutant strains.
M C Lorenz, J Heitman
Genetics. 1998 Dec; 150(4): 1443–1457. doi: 10.1093/genetics/150.4.1443
PMCID:
PMC1460428
SummaryPDF–380K
16.
Intermembrane Space Proteome of Yeast Mitochondria
F.-Nora Vögtle, Julia M. Burkhart, Sanjana Rao, Carolin Gerbeth, Jens Hinrichs, Jean-Claude Martinou, Agnieszka Chacinska, Albert Sickmann, René P. Zahedi, Chris Meisinger
Mol Cell Proteomics. 2012 Dec; 11(12): 1840–1852. Published online 2012 Sep 15. doi: 10.1074/mcp.M112.021105
PMCID:
PMC3518125
ArticlePDF–1.2M
17.
Identifying Protein Kinase–Specific Effectors of the Osmostress Response in Yeast
Natalie Romanov, David Maria Hollenstein, Marion Janschitz, Gustav Ammerer, Dorothea Anrather, Wolfgang Reiter
Sci Signal. Author manuscript; available in PMC 2018 Jul 17.
Published in final edited form as: Sci Signal. 2017 Mar 7; 10(469): eaag2435. Published online 2017 Mar 7. doi: 10.1126/scisignal.aag2435
PMCID:
PMC6049618
ArticlePDF–2.7M
18.
High-resolution DNA-binding specificity analysis of yeast transcription factors
Cong Zhu, Kelsey J.R.P. Byers, Rachel Patton McCord, Zhenwei Shi, Michael F. Berger, Daniel E. Newburger, Katrina Saulrieta, Zachary Smith, Mita V. Shah, Mathangi Radhakrishnan, Anthony A. Philippakis, Yanhui Hu, Federico De Masi, Marcin Pacek, Andreas Rolfs, Tal Murthy, Joshua LaBaer, Martha L. Bulyk
Genome Res. 2009 Apr; 19(4): 556–566. doi: 10.1101/gr.090233.108
PMCID:
PMC2665775
ArticlePDF–2.4M
19.
A Cytosolic Network Suppressing Mitochondria-Mediated Proteostatic Stress and Cell Death
Xiaowen Wang, Xin Jie Chen
Nature. Author manuscript; available in PMC 2016 Feb 27.
Published in final edited form as: Nature. 2015 Aug 27; 524(7566): 481–484. Published online 2015 Jul 20. doi: 10.1038/nature14859
PMCID:
PMC4582408
ArticlePDF–2.3M
20.
Reduced Glucose Sensation Can Increase the Fitness of Saccharomyces cerevisiae Lacking Mitochondrial DNA
Emel Akdoğan, Mehmet Tardu, Görkem Garipler, Gülkız Baytek, İ. Halil Kavakli, Cory D. Dunn
PLoS One. 2016; 11(1): e0146511. Published online 2016 Jan 11. doi: 10.1371/journal.pone.0146511
PMCID:
PMC4709096
ArticlePDF–8.2M

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