PMC Links for Gene (Select 854385) - PMC

Eva Torreira, Jaime Alegrio Louro, Irene Pazos, Noelia González-Polo, David Gil-Carton, Ana Garcia Duran, Sébastien Tosi, Oriol Gallego, Olga Calvo, Carlos Fernández-Tornero

eLife. 2017; 6: e20832. Published online 2017 Mar 6. doi: 10.7554/eLife.20832

PMCID:: PMC5362265

Abstract Article PDF–5.3M

Select item 77080747.

The expression of Rpb10, a small subunit common to RNA polymerases, is modulated by the R3H domain-containing Rbs1 protein and the Upf1 helicase

Małgorzata Cieśla, Tomasz W Turowski, Marcin Nowotny, David Tollervey, Magdalena Boguta

Nucleic Acids Res. 2020 Dec 2; 48(21): 12252–12268. Published online 2020 Nov 24. doi: 10.1093/nar/gkaa1069

PMCID:: PMC7708074

Abstract Article PDF–7.2M

Select item 59078068.

Structural Basis for Eukaryotic Transcription-Coupled DNA Repair Initiation

Jun Xu, Indrajit Lahiri, Wei Wang, Adam Wier, Michael A. Cianfrocco, Jenny Chong, Alissa A. Hare, Peter B. Dervan, Frank DiMaio, Andres E. Leschziner, Dong Wang

Nature. Author manuscript; available in PMC 2018 May 22.

Published in final edited form as: Nature. 2017 Nov 30; 551(7682): 653–657. Published online 2017 Nov 22. doi: 10.1038/nature24658

PMCID:: PMC5907806

Abstract Article PDF–2.1M

Select item 27182619.

Structural basis of transcription: Backtracked RNA polymerase II at 3.4 Å resolution

Dong Wang, David A. Bushnell, Xuhui Huang, Kenneth D. Westover, Michael Levitt, Roger D. Kornberg

Science. Author manuscript; available in PMC 2009 Jul 30.

Published in final edited form as: Science. 2009 May 29; 324(5931): 1203–1206. doi: 10.1126/science.1168729

PMCID:: PMC2718261

Abstract Article PDF–2.1M

Select item 671180310.

3.1Å structure of yeast RNA polymerase II elongation complex stalled at a cyclobutane pyrimidine dimer lesion solved using streptavidin affinity grids

Indrajit Lahiri, Jun Xu, Bong Gyoon Han, Juntaek Oh, Dong Wang, Frank DiMaio, Andres E Leschziner

J Struct Biol. Author manuscript; available in PMC 2020 Sep 1.

Published in final edited form as: J Struct Biol. 2019 Sep 1; 207(3): 270–278. Published online 2019 Jun 11. doi: 10.1016/j.jsb.2019.06.004

PMCID:: PMC6711803

Abstract Article PDF–2.7M

Select item 643532211.

The cryo-EM structure of a 12-subunit variant of RNA polymerase I reveals dissociation of the A49-A34.5 heterodimer and rearrangement of subunit A12.2

Lucas Tafur, Yashar Sadian, Jonas Hanske, Rene Wetzel, Felix Weis, Christoph W Müller

eLife. 2019; 8: e43204. Published online 2019 Mar 26. doi: 10.7554/eLife.43204

PMCID:: PMC6435322

Abstract Article PDF–8.7M

Select item 535463412.

Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast

Martin Lukačišin, Matthieu Landon, Rishi Jajoo

PLoS One. 2017; 12(3): e0174066. Published online 2017 Mar 16. doi: 10.1371/journal.pone.0174066

PMCID:: PMC5354634

Abstract Article PDF–3.2M

Select item 511169713.

Nucleosomal arrangement affects single-molecule transcription dynamics

Veronika Fitz, Jaeoh Shin, Christoph Ehrlich, Lucas Farnung, Patrick Cramer, Vasily Zaburdaev, Stephan W. Grill

Proc Natl Acad Sci U S A. 2016 Nov 8; 113(45): 12733–12738. Published online 2016 Oct 24. doi: 10.1073/pnas.1602764113

PMCID:: PMC5111697

Abstract Article PDF–1.1M

Select item 377855414.

Complete dissection of transcription elongation reveals slow translocation of RNA polymerase II in a linear ratchet mechanism

Manchuta Dangkulwanich, Toyotaka Ishibashi, Shixin Liu, Maria L Kireeva, Lucyna Lubkowska, Mikhail Kashlev, Carlos J Bustamante

eLife. 2013; 2: e00971. Published online 2013 Sep 24. doi: 10.7554/eLife.00971

PMCID:: PMC3778554

Abstract Article PDF–3.5M

Select item 15319315.

Loss of the Rpb4/Rpb7 Subcomplex in a Mutant Form of the Rpb6 Subunit Shared by RNA Polymerases I, II, and III

Qian Tan, Meredith H. Prysak, Nancy A. Woychik

Mol Cell Biol. 2003 May; 23(9): 3329–3338. doi: 10.1128/MCB.23.9.3329-3338.2003

PMCID:: PMC153193

Abstract Article PDF–572K

Select item 299605216.

Rtr1 is a CTD Phosphatase that Regulates the Transition from Serine 5 to Serine 2 Phosphorylation during the RNA Polymerase II Transcription Cycle

Amber L. Mosley, Samantha G. Pattenden, Michael Carey, Swaminathan Venkatesh, Joshua M. Gilmore, Laurence Florens, Jerry L. Workman, Michael P. Washburn

Mol Cell. Author manuscript; available in PMC 2010 Dec 2.

Published in final edited form as: Mol Cell. 2009 Apr 24; 34(2): 168–178. doi: 10.1016/j.molcel.2009.02.025

PMCID:: PMC2996052

Abstract Article PDF–2.1M

Select item 629489417.

NETSeq reveals heterogeneous nucleotide incorporation by RNA polymerase I

Andrew M. Clarke, Krysta L. Engel, Keith E. Giles, Chad M. Petit, David A. Schneider

Proc Natl Acad Sci U S A. 2018 Dec 11; 115(50): E11633–E11641. Published online 2018 Nov 27. doi: 10.1073/pnas.1809421115

PMCID:: PMC6294894

Abstract Article PDF–1.9M

Select item 464305718.

Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble

Christopher O. Barnes, Monica Calero, Indranil Malik, Brian W. Graham, Henrik Spahr, Guowu Lin, Aina Cohen, Ian S. Brown, Qiangmin Zhang, Filippo Pullara, Michael A. Trakselis, Craig D. Kaplan, Guillermo Calero

Mol Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Mol Cell. 2015 Jul 16; 59(2): 258–269. doi: 10.1016/j.molcel.2015.06.034