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Items: 1 to 20 of 24

1.
SURVEY AND SUMMARY: Saccharomyces cerevisiae basic helix–loop–helix proteins regulate diverse biological processes
Kelly A. Robinson, John M. Lopes
Nucleic Acids Res. 2000 Apr 1; 28(7): 1499–1505. doi: 10.1093/nar/28.7.1499
PMCID:
PMC102793
AbstractArticlePDF–145K
2.
Identifying transcription factor functions and targets by phenotypic activation
Gordon Chua, Quaid D. Morris, Richelle Sopko, Mark D. Robinson, Owen Ryan, Esther T. Chan, Brendan J. Frey, Brenda J. Andrews, Charles Boone, Timothy R. Hughes
Proc Natl Acad Sci U S A. 2006 Aug 8; 103(32): 12045–12050. Published online 2006 Jul 31. doi: 10.1073/pnas.0605140103
PMCID:
PMC1567694
AbstractArticlePDF–2.0M
3.
The Snf1 kinase and proteasome-associated Rad23 regulate UV-responsive gene expression
Staton L Wade, Kunal Poorey, Stefan Bekiranov, David T Auble
EMBO J. 2009 Oct 7; 28(19): 2919–2931. Published online 2009 Aug 13. doi: 10.1038/emboj.2009.229
PMCID:
PMC2760106
AbstractArticlePDF–1.7M
4.
The identification of Pcl1-interacting proteins that genetically interact with Cla4 may indicate a link between G1 progression and mitotic exit.
Megan E Keniry, Hilary A Kemp, David M Rivers, George F Sprague, Jr
Genetics. 2004 Mar; 166(3): 1177–1186. doi: 10.1534/genetics.166.3.1177
PMCID:
PMC1470798
SummaryPDF–256K
5.
Multiple Basic Helix-Loop-Helix Proteins Regulate Expression of the ENO1 Gene of Saccharomyces cerevisiae
Meng Chen, John M. Lopes
Eukaryot Cell. 2007 May; 6(5): 786–796. Published online 2007 Mar 9. doi: 10.1128/EC.00383-06
PMCID:
PMC1899243
AbstractArticlePDF–1.2M
6.
Gene dosage effects in yeast support broader roles for the LOG1, HAM1 and DUT1 genes in detoxification of nucleotide analogues
Mattias Carlsson, Guo-Zhen Hu, Hans Ronne
PLoS One. 2018; 13(5): e0196840. Published online 2018 May 8. doi: 10.1371/journal.pone.0196840
PMCID:
PMC5940212
AbstractArticlePDF–28M
7.
A Ham1p-Dependent Mechanism and Modulation of the Pyrimidine Biosynthetic Pathway Can Both Confer Resistance to 5-Fluorouracil in Yeast
Mattias Carlsson, Marie Gustavsson, Guo-Zhen Hu, Eva Murén, Hans Ronne
PLoS One. 2013; 8(10): e52094. Published online 2013 Oct 4. doi: 10.1371/journal.pone.0052094
Correction in:
PLoS One. 2013; 8(11): 10.1371/annotation/fe863e39-ab49-40e2-b262-0219428de65e.
PMCID:
PMC3792807
AbstractArticlePDF–1.1M
8.
Regulators of pseudohyphal differentiation in Saccharomyces cerevisiae identified through multicopy suppressor analysis in ammonium permease mutant strains.
M C Lorenz, J Heitman
Genetics. 1998 Dec; 150(4): 1443–1457. doi: 10.1093/genetics/150.4.1443
PMCID:
PMC1460428
SummaryPDF–380K
9.
Distinct SUMO Ligases Cooperate with Esc2 and Slx5 to Suppress Duplication-Mediated Genome Rearrangements
Claudio P. Albuquerque, Guoliang Wang, Nancy S. Lee, Richard D. Kolodner, Christopher D. Putnam, Huilin Zhou
PLoS Genet. 2013 Aug; 9(8): e1003670. Published online 2013 Aug 1. doi: 10.1371/journal.pgen.1003670
Correction in:
PLoS Genet. 2016 Aug; 12(8): e1006302.
PMCID:
PMC3731205
AbstractArticlePDF–2.9M
10.
Transcription factor regulation and chromosome dynamics during pseudohyphal growth
David Mayhew, Robi D. Mitra
Mol Biol Cell. 2014 Sep 1; 25(17): 2669–2676. doi: 10.1091/mbc.E14-04-0871
PMCID:
PMC4148256
AbstractArticlePDF–2.4M
11.
A nuclear role for the DEAD-box protein Dbp5 in tRNA export
Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit
eLife. 2019; 8: e48410. Published online 2019 Aug 27. doi: 10.7554/eLife.48410
Correction in:
eLife. 2020; 9: e63264.
PMCID:
PMC6711706
AbstractArticlePDF–3.8M
12.
Epistatic relationships reveal the functional organization of yeast transcription factors
Jiashun Zheng, Joris J Benschop, Michael Shales, Patrick Kemmeren, Jack Greenblatt, Gerard Cagney, Frank Holstege, Hao Li, Nevan J Krogan
Mol Syst Biol. 2010; 6: 420. Published online 2010 Oct 19. doi: 10.1038/msb.2010.77
PMCID:
PMC2990640
AbstractArticlePDF–3.5M
13.
A Protein Interaction Map of the Mitotic Spindle
Jonathan Wong, Yuko Nakajima, Stefan Westermann, Ching Shang, Jung-seog Kang, Crystal Goodner, Pantea Houshmand, Stanley Fields, Clarence S.M. Chan, David Drubin, Georjana Barnes, Tony Hazbun
Mol Biol Cell. 2007 Oct; 18(10): 3800–3809. doi: 10.1091/mbc.E07-06-0536
PMCID:
PMC1995735
AbstractArticlePDF–796K
14.
Rewiring of Genetic Networks in Response to DNA Damage
Sourav Bandyopadhyay, Monika Mehta, Dwight Kuo, Min-Kyung Sung, Ryan Chuang, Eric J. Jaehnig, Bernd Bodenmiller, Katherine Licon, Wilbert Copeland, Michael Shales, Dorothea Fiedler, Janusz Dutkowski, Aude Guénolé, Haico van Attikum, Kevan M. Shokat, Richard D. Kolodner, Won-Ki Huh, Ruedi Aebersold, Michael-Christopher Keogh, Nevan J. Krogan, Trey Ideker
Science. Author manuscript; available in PMC 2010 Dec 21.
Published in final edited form as: Science. 2010 Dec 3; 330(6009): 1385–1389. doi: 10.1126/science.1195618
Correction in:
volume 331 on page 284
PMCID:
PMC3006187
AbstractArticlePDF–1.9M
15.
Genome-Wide Study of the Adaptation of Saccharomyces cerevisiae to the Early Stages of Wine Fermentation
Maite Novo, Ana Mangado, Manuel Quirós, Pilar Morales, Zoel Salvadó, Ramon Gonzalez
PLoS One. 2013; 8(9): e74086. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0074086
PMCID:
PMC3764036
AbstractArticlePDF–496K
16.
Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p
Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt
Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518
PMCID:
PMC4616039
AbstractArticlePDF–2.2M
17.
High Quality Binary Protein Interaction Map of the Yeast Interactome Network
Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amélie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-László Barabási, Jan Tavernier, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2009 Sep 18.
Published in final edited form as: Science. 2008 Oct 3; 322(5898): 104–110. Published online 2008 Aug 21. doi: 10.1126/science.1158684
PMCID:
PMC2746753
AbstractArticlePDF–2.2M
18.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
19.
Architecture and dynamics of overlapped RNA regulatory networks
Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens
RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117
PMCID:
PMC5648032
AbstractArticlePDF–6.6M
20.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M

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