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Select item 80049141.

SCRaMbLE: A Study of Its Robustness and Challenges through Enhancement of Hygromycin B Resistance in a Semi-Synthetic Yeast

Jun Yang Ong, Reem Swidah, Marco Monti, Daniel Schindler, Junbiao Dai, Yizhi Cai

Bioengineering (Basel) 2021 Mar; 8(3): 42. Published online 2021 Mar 23. doi: 10.3390/bioengineering8030042

PMCID:: PMC8004914

Article PDF–4.2M

Select item 35624292.

Actin Filament Elongation in Arp2/3-derived Networks is Controlled by Three Distinct Mechanisms

Alphée Michelot, Alexandre Grassart, Voytek Okreglak, Michael Costanzo, Charles Boone, David G. Drubin

Dev Cell. Author manuscript; available in PMC 2014 Jan 28.

Published in final edited form as: Dev Cell. 2013 Jan 28; 24(2): 182–195. Published online 2013 Jan 17. doi: 10.1016/j.devcel.2012.12.008

PMCID:: PMC3562429

Article PDF–2.6M

Select item 3144693.

Protein Interaction Networks by Proteome Peptide Scanning

Christiane Landgraf, Simona Panni, Luisa Montecchi-Palazzi, Luisa Castagnoli, Jens Schneider-Mergener, Rudolf Volkmer-Engert, Gianni Cesareni

PLoS Biol. 2004 Jan; 2(1): e14. Published online 2004 Jan 20. doi: 10.1371/journal.pbio.0020014

PMCID:: PMC314469

Article PDF–588K

Select item 12778184.

Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening

Angie S Mah, Andrew EH Elia, Geeta Devgan, Jason Ptacek, Mike Schutkowski, Michael Snyder, Michael B Yaffe, Raymond J Deshaies

BMC Biochem. 2005; 6: 22. Published online 2005 Oct 21. doi: 10.1186/1471-2091-6-22

PMCID:: PMC1277818

Article PDF–566K

Select item 41271215.

The Calcineurin Signaling Network Evolves Via Conserved Kinase–Phosphatase Modules That Transcend Substrate Identity

Aaron Goldman, Jagoree Roy, Bernd Bodenmiller, Stefanie Wanka, Christian R. Landry, Ruedi Aebersold, Martha S. Cyert

Mol Cell. Author manuscript; available in PMC 2015 Aug 7.

Published in final edited form as: Mol Cell. 2014 Aug 7; 55(3): 422–435. Published online 2014 Jun 12. doi: 10.1016/j.molcel.2014.05.012

PMCID:: PMC4127121

Article PDF–1.2M

Select item 26837886.

A systematic survey identifies prions and illuminates sequence features of prionogenic proteins

Simon Alberti, Randal Halfmann, Oliver King, Atul Kapila, Susan Lindquist

Cell. Author manuscript; available in PMC 2009 Oct 3.

Published in final edited form as: Cell. 2009 Apr 3; 137(1): 146–158. doi: 10.1016/j.cell.2009.02.044

PMCID:: PMC2683788

Article PDF–5.2M

Select item 21964257.

A protein interaction map for cell polarity development

Becky L. Drees, Bryan Sundin, Elizabeth Brazeau, Juliane P. Caviston, Guang-Chao Chen, Wei Guo, Keith G. Kozminski, Michelle W. Lau, John J. Moskow, Amy Tong, Laura R. Schenkman, Amos McKenzie, III, Patrick Brennwald, Mark Longtine, Erfei Bi, Clarence Chan, Peter Novick, Charles Boone, John R. Pringle, Trisha N. Davis, Stanley Fields, David G. Drubin

J Cell Biol. 2001 Aug 6; 154(3): 549–576. doi: 10.1083/jcb.200104057

PMCID:: PMC2196425

Article PDF–868K

Select item 77214758.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030

PMCID:: PMC7721475

Article

Select item 29988919.

Reconstitution and Protein Composition Analysis of Endocytic Actin Patches

Alphée Michelot, Michael Costanzo, Ali Sarkeshik, Charles Boone, John R. Yates, III, David G. Drubin

Curr Biol. Author manuscript; available in PMC 2011 Nov 9.

Published in final edited form as: Curr Biol. 2010 Nov 9; 20(21): 1890–1899. Published online 2010 Oct 28. doi: 10.1016/j.cub.2010.10.016

PMCID:: PMC2998891

Article PDF–2.6M

Select item 244833210.

Genome-Wide Protein Interaction Screens Reveal Functional Networks Involving Sm-Like Proteins

Micheline Fromont-Racine, Andrew E. Mayes, Adeline Brunet-Simon, Jean-Christophe Rain, Alan Colley, Ian Dix, Laurence Decourty, Nicolas Joly, Florence Ricard, Jean D. Beggs, Pierre Legrain

Yeast. 2000; 17(2): 95–110. doi: 10.1002/1097-0061(20000630)17:2<95::AID-YEA16>3.0.CO;2-H

PMCID:: PMC2448332

Summary PDF–287K

Select item 264897911.

Computationally Driven, Quantitative Experiments Discover Genes Required for Mitochondrial Biogenesis

David C. Hess, Chad L. Myers, Curtis Huttenhower, Matthew A. Hibbs, Alicia P. Hayes, Jadine Paw, John J. Clore, Rosa M. Mendoza, Bryan San Luis, Corey Nislow, Guri Giaever, Michael Costanzo, Olga G. Troyanskaya, Amy A. Caudy

PLoS Genet. 2009 Mar; 5(3): e1000407. Published online 2009 Mar 20. doi: 10.1371/journal.pgen.1000407

PMCID:: PMC2648979

Article PDF–1.6M

Select item 307349812.

A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking

Pablo S Aguilar, Florian Fröhlich, Michael Rehman, Mike Shales, Igor Ulitsky, Agustina Olivera-Couto, Hannes Braberg, Ron Shamir, Peter Walter, Matthias Mann, Christer S Ejsing, Nevan J Krogan, Tobias C Walther

Nat Struct Mol Biol. Author manuscript; available in PMC 2011 Jul 1.

Published in final edited form as: Nat Struct Mol Biol. 2010 Jul; 17(7): 901–908. Published online 2010 Jun 6. doi: 10.1038/nsmb.1829

PMCID:: PMC3073498

Article PDF–1.9M

Select item 508651913.

Combined Action of Histone Reader Modules Regulates NuA4 Local Acetyltransferase Function but Not Its Recruitment on the Genome

Anne-Lise Steunou, Myriam Cramet, Dorine Rossetto, Maria J. Aristizabal, Nicolas Lacoste, Simon Drouin, Valérie Côté, Eric Paquet, Rhea T. Utley, Nevan Krogan, François Robert, Michael S. Kobor, Jacques Côté

Mol Cell Biol. 2016 Nov 15; 36(22): 2768–2781. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00112-16

PMCID:: PMC5086519

Article PDF–2.3M

Select item 414980414.

Exploring the Yeast Acetylome Using Functional Genomics

Supipi Kaluarachchi Duffy, Helena Friesen, Anastasia Baryshnikova, Jean-Philippe Lambert, Yolanda T. Chong, Daniel Figeys, Brenda Andrews

Cell. Author manuscript; available in PMC 2014 Aug 30.

Published in final edited form as: Cell. 2012 May 11; 149(4): 936–948. doi: 10.1016/j.cell.2012.02.064

PMCID:: PMC4149804

Article PDF–2.1M

Select item 275658815.

Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins

Raffi Tonikian, Xiaofeng Xin, Christopher P. Toret, David Gfeller, Christiane Landgraf, Simona Panni, Serena Paoluzi, Luisa Castagnoli, Bridget Currell, Somasekar Seshagiri, Haiyuan Yu, Barbara Winsor, Marc Vidal, Mark B. Gerstein, Gary D. Bader, Rudolf Volkmer, Gianni Cesareni, David G. Drubin, Philip M. Kim, Sachdev S. Sidhu, Charles Boone

PLoS Biol. 2009 Oct; 7(10): e1000218. Published online 2009 Oct 20. doi: 10.1371/journal.pbio.1000218

PMCID:: PMC2756588

Article PDF–838K

Select item 419179016.

Cell cycle-regulated oscillator coordinates core histone gene transcription through histone acetylation

Christoph F. Kurat, Jean-Philippe Lambert, Julia Petschnigg, Helena Friesen, Tony Pawson, Adam Rosebrock, Anne-Claude Gingras, Jeffrey Fillingham, Brenda Andrews

Proc Natl Acad Sci U S A. 2014 Sep 30; 111(39): 14124–14129. Published online 2014 Sep 16. doi: 10.1073/pnas.1414024111

PMCID:: PMC4191790

Article PDF–1.0M

Select item 39555317.

Complete DNA sequence of yeast chromosome II.

H Feldmann, M Aigle, G Aljinovic, B André, M C Baclet, C Barthe, A Baur, A M Bécam, N Biteau, E Boles, et al.

EMBO J. 1994 Dec 15; 13(24): 5795–5809. doi: 10.1002/j.1460-2075.1994.tb06923.x

PMCID:: PMC395553

Article PDF–3.1M

Select item 611694918.

A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A

Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai

Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305

PMCID:: PMC6116949

Article PDF–2.1M

Select item 756021619.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Article PDF–3.6M

Select item 1055170020.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108