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Items: 1 to 20 of 25

1.
Long-term interaction between Drosophila sperm and sex peptide is mediated by other seminal proteins that bind only transiently to sperm
Akanksha Singh, Norene A. Buehner, He Lin, Kaitlyn J. Baranowski, Geoffrey D. Findlay, Mariana F. Wolfner
Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Nov 1.
Published in final edited form as: Insect Biochem Mol Biol. 2018 Nov; 102: 43–51. Published online 2018 Sep 11. doi: 10.1016/j.ibmb.2018.09.004
PMCID:
PMC6249070
AbstractArticlePDF–2.5M
2.
Divergent allocation of sperm and the seminal proteome along a competition gradient in Drosophila melanogaster
Ben R. Hopkins, Irem Sepil, Marie-Laëtitia Thézénas, James F. Craig, Thomas Miller, Philip D. Charles, Roman Fischer, Benedikt M. Kessler, Amanda Bretman, Tommaso Pizzari, Stuart Wigby
Proc Natl Acad Sci U S A. 2019 Sep 3; 116(36): 17925–17933. Published online 2019 Aug 20. doi: 10.1073/pnas.1906149116
PMCID:
PMC6731677
AbstractArticlePDF–1.3M
3.
The life history of Drosophila sperm involves molecular continuity between male and female reproductive tracts
Erin L. McCullough, Emma Whittington, Akanksha Singh, Scott Pitnick, Mariana F. Wolfner, Steve Dorus
Proc Natl Acad Sci U S A. 2022 Mar 15; 119(11): e2119899119. Published online 2022 Mar 7. doi: 10.1073/pnas.2119899119
PMCID:
PMC8931355
AbstractArticlePDF–4.6M
4.
Seminal fluid gene expression and reproductive fitness in Drosophila melanogaster
Bahar Patlar, Alberto Civetta
BMC Ecol Evol. 2022; 22: 20. Published online 2022 Feb 23. doi: 10.1186/s12862-022-01975-1
PMCID:
PMC8867848
AbstractArticlePDF–1.6M
5.
Evolutionary Rate Covariation Identifies New Members of a Protein Network Required for Drosophila melanogaster Female Post-Mating Responses
Geoffrey D. Findlay, Jessica L. Sitnik, Wenke Wang, Charles F. Aquadro, Nathan L. Clark, Mariana F. Wolfner
PLoS Genet. 2014 Jan; 10(1): e1004108. Published online 2014 Jan 16. doi: 10.1371/journal.pgen.1004108
PMCID:
PMC3894160
AbstractArticlePDF–1.5M
6.
Transposable element dynamics and PIWI regulation impacts lncRNA and gene expression diversity in Drosophila ovarian cell cultures
Yuliya A. Sytnikova, Reazur Rahman, Gung-wei Chirn, Josef P. Clark, Nelson C. Lau
Genome Res. 2014 Dec; 24(12): 1977–1990. doi: 10.1101/gr.178129.114
PMCID:
PMC4248314
AbstractArticlePDF–2.5M
7.
Gene Protein Sequence Evolution Can Predict the Rapid Divergence of Ovariole Numbers in the Drosophila melanogaster Subgroup
Carrie A Whittle, Cassandra G Extavour
Genome Biol Evol. 2024 Jul; 16(7): evae118. Published online 2024 Jun 7. doi: 10.1093/gbe/evae118
PMCID:
PMC11272079
AbstractArticlePDF–737K
8.
Identification and Function of Proteolysis Regulators in Seminal Fluid
Brooke A. LaFlamme, Mariana F. Wolfner
Mol Reprod Dev. Author manuscript; available in PMC 2014 Feb 13.
Published in final edited form as: Mol Reprod Dev. 2013 Feb; 80(2): 80–101. Published online 2012 Dec 4. doi: 10.1002/mrd.22130
PMCID:
PMC3923310
AbstractArticlePDF–316K
9.
Proteomics Reveals Novel Drosophila Seminal Fluid Proteins Transferred at Mating
Geoffrey D Findlay, Xianhua Yi, Michael J MacCoss, Willie J Swanson
PLoS Biol. 2008 Jul; 6(7): e178. Published online 2008 Jul 29. doi: 10.1371/journal.pbio.0060178
Correction in:
PLoS Biol. 2009 Jun; 7(6): 10.1371/annotation/2177fe97-a5bc-45d5-8fa9-5c3639dda4f3.
PMCID:
PMC2486302
AbstractArticlePDF–382K
10.
Building a platform for predicting functions of serine protease-related proteins in Drosophila melanogaster and other insects
Xiaolong Cao, Haobo Jiang
Insect Biochem Mol Biol. Author manuscript; available in PMC 2019 Dec 1.
Published in final edited form as: Insect Biochem Mol Biol. 2018 Dec; 103: 53–69. Published online 2018 Oct 24. doi: 10.1016/j.ibmb.2018.10.006
PMCID:
PMC6358214
AbstractArticlePDF–6.9M
11.
Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome
Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair
Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999
PMCID:
PMC4928047
AbstractArticlePDF–3.1M
12.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
13.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
14.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
15.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
16.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
17.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M
18.
Combined Evidence Annotation of Transposable Elements in Genome Sequences
Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere
PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022
PMCID:
PMC1185648
AbstractArticlePDF–273K
19.
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly
Roger A Hoskins, Christopher D Smith, Joseph W Carlson, A Bernardo Carvalho, Aaron Halpern, Joshua S Kaminker, Cameron Kennedy, Chris J Mungall, Beth A Sullivan, Granger G Sutton, Jiro C Yasuhara, Barbara T Wakimoto, Eugene W Myers, Susan E Celniker, Gerald M Rubin, Gary H Karpen
Genome Biol. 2002; 3(12): research0085.1–85.16. Published online 2002 Dec 31. doi: 10.1186/gb-2002-3-12-research0085
PMCID:
PMC151187
AbstractArticlePDF–280K
20.
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective
Joshua S Kaminker, Casey M Bergman, Brent Kronmiller, Joseph Carlson, Robert Svirskas, Sandeep Patel, Erwin Frise, David A Wheeler, Suzanna E Lewis, Gerald M Rubin, Michael Ashburner, Susan E Celniker
Genome Biol. 2002; 3(12): research0084.1–84.2. Published online 2002 Dec 23. doi: 10.1186/gb-2002-3-12-research0084
PMCID:
PMC151186
AbstractArticlePDF–330K

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